RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
CCDC60-201ENST00000327554 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.12
CCDC60-201ENST00000327554 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
CCDC60-201ENST00000327554 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
CCDC60-201ENST00000327554 USP24Q9UPU5 2620 aa8.02□□□□□ -1.13
CCDC60-201ENST00000327554 F8P00451 2351 aa8.01□□□□□ -1.13
CCDC60-201ENST00000327554 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
CCDC60-201ENST00000327554 COA5Q86WW8 74 aa8.01□□□□□ -1.13
CCDC60-201ENST00000327554 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
CCDC60-201ENST00000327554 DNAH10OSP0CZ25 163 aa8□□□□□ -1.13
CCDC60-201ENST00000327554 A6NN06 94 aa8□□□□□ -1.13
CCDC60-201ENST00000327554 DNAH1Q9P2D7 4330 aa7.99□□□□□ -1.13
CCDC60-201ENST00000327554 A6NED7 52 aa7.98□□□□□ -1.13
CCDC60-201ENST00000327554 A8MWP4 228 aa7.98□□□□□ -1.13
CCDC60-201ENST00000327554 PRLHP81277 87 aa7.98□□□□□ -1.13
CCDC60-201ENST00000327554 SMR3AQ99954 134 aa7.98□□□□□ -1.13
CCDC60-201ENST00000327554 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
CCDC60-201ENST00000327554 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
CCDC60-201ENST00000327554 TRRAPQ9Y4A5 3859 aa7.97□□□□□ -1.13
CCDC60-201ENST00000327554 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.14
CCDC60-201ENST00000327554 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
CCDC60-201ENST00000327554 NOTCH2Q04721 2471 aa7.95□□□□□ -1.14
CCDC60-201ENST00000327554 NDUFS5O43920 106 aa7.95□□□□□ -1.14
CCDC60-201ENST00000327554 ITPR2Q14571 2701 aa7.94□□□□□ -1.14
CCDC60-201ENST00000327554 DEFB131BA0A096LNP1 70 aa7.94□□□□□ -1.14
CCDC60-201ENST00000327554 TENM3Q9P273 2699 aa7.94□□□□□ -1.14
CCDC60-201ENST00000327554 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
CCDC60-201ENST00000327554 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
CCDC60-201ENST00000327554 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
CCDC60-201ENST00000327554 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
CCDC60-201ENST00000327554 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
CCDC60-201ENST00000327554 TENM4Q6N022 2769 aa7.91□□□□□ -1.14
CCDC60-201ENST00000327554 TENM2Q9NT68 2774 aa7.9□□□□□ -1.15
CCDC60-201ENST00000327554 MOBPQ13875 183 aa7.89□□□□□ -1.15
CCDC60-201ENST00000327554 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
CCDC60-201ENST00000327554 SPRR1BP22528 89 aa7.89□□□□□ -1.15
CCDC60-201ENST00000327554 SPAG11AQ6PDA7 123 aa7.88□□□□□ -1.15
CCDC60-201ENST00000327554 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
CCDC60-201ENST00000327554 A0A096LNI7 61 aa7.88□□□□□ -1.15
CCDC60-201ENST00000327554 H0Y9J4 135 aa7.88□□□□□ -1.15
CCDC60-201ENST00000327554 C11orf45Q8TAV5 145 aa7.87□□□□□ -1.15
CCDC60-201ENST00000327554 ATRQ13535 2644 aa7.87□□□□□ -1.15
CCDC60-201ENST00000327554 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
CCDC60-201ENST00000327554 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
CCDC60-201ENST00000327554 IGKV2-24A0A0C4DH68 120 aa7.85□□□□□ -1.15
CCDC60-201ENST00000327554 KRTAP10-11P60412 298 aa7.85□□□□□ -1.15
CCDC60-201ENST00000327554 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
CCDC60-201ENST00000327554 ANK2Q01484 3957 aa7.85□□□□□ -1.15
CCDC60-201ENST00000327554 SPINK7P58062 85 aa7.85□□□□□ -1.15
CCDC60-201ENST00000327554 OXLD1Q5BKU9 147 aa7.83□□□□□ -1.16
CCDC60-201ENST00000327554 Q6ZR54 194 aa7.83□□□□□ -1.16
CCDC60-201ENST00000327554 HRES1P13985 223 aa7.82□□□□□ -1.16
CCDC60-201ENST00000327554 TP53AIP1Q9HCN2 124 aa7.82□□□□□ -1.16
CCDC60-201ENST00000327554 Q96NJ1 140 aa7.81□□□□□ -1.16
CCDC60-201ENST00000327554 DNAH10Q8IVF4 4471 aa7.8□□□□□ -1.16
CCDC60-201ENST00000327554 INAFM1C9JVW0 142 aa7.79□□□□□ -1.16
CCDC60-201ENST00000327554 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
CCDC60-201ENST00000327554 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
CCDC60-201ENST00000327554 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
CCDC60-201ENST00000327554 CSMD3Q7Z407 3707 aa7.75□□□□□ -1.17
CCDC60-201ENST00000327554 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
CCDC60-201ENST00000327554 FLNBO75369 2602 aaKnown RBP7.73□□□□□ -1.17
CCDC60-201ENST00000327554 FBN1P35555 2871 aaKnown RBP7.73□□□□□ -1.17
CCDC60-201ENST00000327554 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
CCDC60-201ENST00000327554 LYSTQ99698 3801 aa7.71□□□□□ -1.17
CCDC60-201ENST00000327554 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
CCDC60-201ENST00000327554 ALMS1Q8TCU4 4167 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 A0A1B0GVX0 72 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 CMYA5Q8N3K9 4069 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
CCDC60-201ENST00000327554 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
CCDC60-201ENST00000327554 LINC00313P59037 77 aa7.69□□□□□ -1.18
CCDC60-201ENST00000327554 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
CCDC60-201ENST00000327554 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
CCDC60-201ENST00000327554 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
CCDC60-201ENST00000327554 C8orf87E5RJ46 101 aa7.67□□□□□ -1.18
CCDC60-201ENST00000327554 KMT2BQ9UMN6 2715 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-201ENST00000327554 A0A087X002 238 aa7.67□□□□□ -1.18
CCDC60-201ENST00000327554 NOTCH2NLQ7Z3S9 236 aa7.67□□□□□ -1.18
CCDC60-201ENST00000327554 MAST4O15021 2626 aa7.66□□□□□ -1.18
CCDC60-201ENST00000327554 K7EIL1 84 aa7.66□□□□□ -1.18
CCDC60-201ENST00000327554 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
CCDC60-201ENST00000327554 MDFIQ99750 246 aa7.63□□□□□ -1.19
CCDC60-201ENST00000327554 KRTAP13-3Q3SY46 172 aa7.63□□□□□ -1.19
CCDC60-201ENST00000327554 Q5W150 140 aa7.62□□□□□ -1.19
CCDC60-201ENST00000327554 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
CCDC60-201ENST00000327554 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
CCDC60-201ENST00000327554 PANO1I0J062 215 aa7.61□□□□□ -1.19
CCDC60-201ENST00000327554 HUWE1Q7Z6Z7 4374 aaKnown RBP7.6□□□□□ -1.19
CCDC60-201ENST00000327554 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
CCDC60-201ENST00000327554 LINC00483Q53H64 154 aa7.6□□□□□ -1.19
CCDC60-201ENST00000327554 COL7A1Q02388 2944 aa7.6□□□□□ -1.19
CCDC60-201ENST00000327554 PLA2G1BP04054 148 aaKnown RBP7.6□□□□□ -1.19
CCDC60-201ENST00000327554 C14orf177Q52M58 125 aa7.59□□□□□ -1.19
CCDC60-201ENST00000327554 ACYP2P14621 99 aa7.58□□□□□ -1.2
CCDC60-201ENST00000327554 WWC2-AS2Q96NR7 200 aa7.57□□□□□ -1.2
CCDC60-201ENST00000327554 RTL8CO15255 209 aa7.54□□□□□ -1.2
CCDC60-201ENST00000327554 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms