RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 HSPG2P98160 4391 aa11.53□□□□□ -0.56
EXOSC3-201ENST00000327304 BCE1O60756 84 aa11.53□□□□□ -0.56
EXOSC3-201ENST00000327304 SMR3BP02814 79 aaPredicted RBP11.53□□□□□ -0.56
EXOSC3-201ENST00000327304 SCGB1A1P11684 91 aa11.53□□□□□ -0.56
EXOSC3-201ENST00000327304 LINC00846Q9NV44 126 aa11.53□□□□□ -0.56
EXOSC3-201ENST00000327304 FAT1Q14517 4588 aa11.52□□□□□ -0.57
EXOSC3-201ENST00000327304 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
EXOSC3-201ENST00000327304 RYR1P21817 5038 aa11.51□□□□□ -0.57
EXOSC3-201ENST00000327304 HIGD2AQ9BW72 106 aa11.51□□□□□ -0.57
EXOSC3-201ENST00000327304 UBE2AP49459 152 aa11.49□□□□□ -0.57
EXOSC3-201ENST00000327304 C1orf137Q5JT78 98 aa11.49□□□□□ -0.57
EXOSC3-201ENST00000327304 KIAA1109Q2LD37 5005 aa11.49□□□□□ -0.57
EXOSC3-201ENST00000327304 Q6Q795 121 aa11.48□□□□□ -0.57
EXOSC3-201ENST00000327304 KRTAP13-1Q8IUC0 172 aa11.48□□□□□ -0.57
EXOSC3-201ENST00000327304 VPS13BQ7Z7G8 4022 aa11.47□□□□□ -0.57
EXOSC3-201ENST00000327304 TRBV7-7A0A0K0K1E9 115 aa11.45□□□□□ -0.58
EXOSC3-201ENST00000327304 C3orf22Q8N5N4 141 aa11.45□□□□□ -0.58
EXOSC3-201ENST00000327304 SMIM29Q86T20 159 aa11.44□□□□□ -0.58
EXOSC3-201ENST00000327304 IMUPQ9GZP8 106 aa11.44□□□□□ -0.58
EXOSC3-201ENST00000327304 SPRR1BP22528 89 aa11.43□□□□□ -0.58
EXOSC3-201ENST00000327304 PCP4P48539 62 aa11.43□□□□□ -0.58
EXOSC3-201ENST00000327304 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
EXOSC3-201ENST00000327304 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
EXOSC3-201ENST00000327304 Q6JHZ5 121 aa11.42□□□□□ -0.58
EXOSC3-201ENST00000327304 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
EXOSC3-201ENST00000327304 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
EXOSC3-201ENST00000327304 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.59
EXOSC3-201ENST00000327304 A0A1B0GW54 56 aa11.39□□□□□ -0.59
EXOSC3-201ENST00000327304 F8WEM9 126 aa11.39□□□□□ -0.59
EXOSC3-201ENST00000327304 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
EXOSC3-201ENST00000327304 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
EXOSC3-201ENST00000327304 ZNF861PO60384 105 aa11.37□□□□□ -0.59
EXOSC3-201ENST00000327304 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
EXOSC3-201ENST00000327304 KRTAP17-1Q9BYP8 105 aa11.37□□□□□ -0.59
EXOSC3-201ENST00000327304 Q6ZVQ6 151 aa11.35□□□□□ -0.59
EXOSC3-201ENST00000327304 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
EXOSC3-201ENST00000327304 Q8NBF4 154 aa11.33□□□□□ -0.6
EXOSC3-201ENST00000327304 A0A1W2PNM2 257 aa11.32□□□□□ -0.6
EXOSC3-201ENST00000327304 Q5VSD8 79 aa11.32□□□□□ -0.6
EXOSC3-201ENST00000327304 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
EXOSC3-201ENST00000327304 ZNF706Q9Y5V0 76 aaPredicted RBP11.32□□□□□ -0.6
EXOSC3-201ENST00000327304 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
EXOSC3-201ENST00000327304 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
EXOSC3-201ENST00000327304 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
EXOSC3-201ENST00000327304 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
EXOSC3-201ENST00000327304 Q8N1X5 172 aa11.29□□□□□ -0.6
EXOSC3-201ENST00000327304 CRYGAP11844 174 aa11.27□□□□□ -0.61
EXOSC3-201ENST00000327304 CXCL6P80162 114 aa11.27□□□□□ -0.61
EXOSC3-201ENST00000327304 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.61
EXOSC3-201ENST00000327304 NREPQ16612 68 aa11.25□□□□□ -0.61
EXOSC3-201ENST00000327304 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
EXOSC3-201ENST00000327304 HERC2O95714 4834 aa11.21□□□□□ -0.61
EXOSC3-201ENST00000327304 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.62
EXOSC3-201ENST00000327304 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.62
EXOSC3-201ENST00000327304 HIST1H4AP62805 103 aaKnown RBP11.2□□□□□ -0.62
EXOSC3-201ENST00000327304 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
EXOSC3-201ENST00000327304 A0A0G2JQZ4 141 aa11.18□□□□□ -0.62
EXOSC3-201ENST00000327304 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
EXOSC3-201ENST00000327304 A0A087WVE0 104 aa11.16□□□□□ -0.62
EXOSC3-201ENST00000327304 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
EXOSC3-201ENST00000327304 BPY2O14599 106 aa11.15□□□□□ -0.62
EXOSC3-201ENST00000327304 KRTAP4-5Q9BYR2 181 aa11.15□□□□□ -0.62
EXOSC3-201ENST00000327304 IGLV9-49A0A0B4J1Y8 123 aa11.14□□□□□ -0.63
EXOSC3-201ENST00000327304 C9orf153Q5TBE3 101 aa11.14□□□□□ -0.63
EXOSC3-201ENST00000327304 A0A087WSZ3 146 aa11.12□□□□□ -0.63
EXOSC3-201ENST00000327304 ATOX1O00244 68 aa11.09□□□□□ -0.63
EXOSC3-201ENST00000327304 A0A087X002 238 aa11.08□□□□□ -0.64
EXOSC3-201ENST00000327304 MOBPQ13875 183 aa11.07□□□□□ -0.64
EXOSC3-201ENST00000327304 FAM229BQ4G0N7 80 aa11.07□□□□□ -0.64
EXOSC3-201ENST00000327304 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
EXOSC3-201ENST00000327304 IGKV4-1P06312 121 aa11.05□□□□□ -0.64
EXOSC3-201ENST00000327304 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
EXOSC3-201ENST00000327304 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
EXOSC3-201ENST00000327304 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
EXOSC3-201ENST00000327304 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
EXOSC3-201ENST00000327304 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.64
EXOSC3-201ENST00000327304 DSCR10P59022 87 aa11.01□□□□□ -0.65
EXOSC3-201ENST00000327304 SSBP3-AS1Q7Z2R9 100 aa11.01□□□□□ -0.65
EXOSC3-201ENST00000327304 Q8N9L7 120 aa11.01□□□□□ -0.65
EXOSC3-201ENST00000327304 MYCBP2O75592 4640 aa11□□□□□ -0.65
EXOSC3-201ENST00000327304 LINC00472Q9H8W2 130 aa10.98□□□□□ -0.65
EXOSC3-201ENST00000327304 SS18L2Q9UHA2 77 aa10.98□□□□□ -0.65
EXOSC3-201ENST00000327304 CD164Q04900 197 aa10.96□□□□□ -0.65
EXOSC3-201ENST00000327304 SERP2Q8N6R1 65 aa10.95□□□□□ -0.66
EXOSC3-201ENST00000327304 J3KT08 172 aa10.94□□□□□ -0.66
EXOSC3-201ENST00000327304 K7EQZ3 153 aa10.94□□□□□ -0.66
EXOSC3-201ENST00000327304 COX7CP15954 63 aa10.94□□□□□ -0.66
EXOSC3-201ENST00000327304 HRCT1Q6UXD1 115 aa10.94□□□□□ -0.66
EXOSC3-201ENST00000327304 TYMSOSQ8TAI1 123 aa10.94□□□□□ -0.66
EXOSC3-201ENST00000327304 DEFB116Q30KQ4 102 aa10.93□□□□□ -0.66
EXOSC3-201ENST00000327304 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
EXOSC3-201ENST00000327304 UQCRQO14949 82 aa10.93□□□□□ -0.66
EXOSC3-201ENST00000327304 TNXBP22105 4242 aa10.93□□□□□ -0.66
EXOSC3-201ENST00000327304 CCDC179H3BU77 68 aa10.92□□□□□ -0.66
EXOSC3-201ENST00000327304 A8MWP4 228 aa10.89□□□□□ -0.67
EXOSC3-201ENST00000327304 Q96NJ1 140 aa10.89□□□□□ -0.67
EXOSC3-201ENST00000327304 KRTAP10-8P60410 259 aa10.88□□□□□ -0.67
EXOSC3-201ENST00000327304 TRAV7A0A075B6U4 112 aa10.88□□□□□ -0.67
EXOSC3-201ENST00000327304 PRR15Q8IV56 129 aa10.86□□□□□ -0.67
EXOSC3-201ENST00000327304 OXTP01178 125 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms