RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 Q6ZQY7 126 aa6.56□□□□□ -1.36
TPM3-204ENST00000323144 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
TPM3-204ENST00000323144 F8WEM9 126 aa6.55□□□□□ -1.36
TPM3-204ENST00000323144 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
TPM3-204ENST00000323144 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
TPM3-204ENST00000323144 LINC00575Q6W349 94 aa6.54□□□□□ -1.36
TPM3-204ENST00000323144 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
TPM3-204ENST00000323144 C12orf57Q99622 126 aa6.54□□□□□ -1.36
TPM3-204ENST00000323144 HIST1H2BLQ99880 126 aa6.54□□□□□ -1.36
TPM3-204ENST00000323144 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
TPM3-204ENST00000323144 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
TPM3-204ENST00000323144 TCL1BO95988 128 aa6.52□□□□□ -1.37
TPM3-204ENST00000323144 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
TPM3-204ENST00000323144 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
TPM3-204ENST00000323144 hADV29S1A0JD25 119 aa6.5□□□□□ -1.37
TPM3-204ENST00000323144 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
TPM3-204ENST00000323144 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
TPM3-204ENST00000323144 H3BUT2 72 aa6.48□□□□□ -1.37
TPM3-204ENST00000323144 S100A6P06703 90 aa6.48□□□□□ -1.37
TPM3-204ENST00000323144 VAMP3Q15836 100 aa6.48□□□□□ -1.37
TPM3-204ENST00000323144 HSBP1L1C9JCN9 74 aa6.47□□□□□ -1.37
TPM3-204ENST00000323144 M0R2T5 61 aa6.47□□□□□ -1.37
TPM3-204ENST00000323144 S100A2P29034 98 aa6.47□□□□□ -1.37
TPM3-204ENST00000323144 Q6JHZ5 121 aa6.47□□□□□ -1.37
TPM3-204ENST00000323144 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
TPM3-204ENST00000323144 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.45□□□□□ -1.38
TPM3-204ENST00000323144 OCIAD2Q56VL3 154 aa6.44□□□□□ -1.38
TPM3-204ENST00000323144 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
TPM3-204ENST00000323144 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
TPM3-204ENST00000323144 Q75L30 129 aa6.42□□□□□ -1.38
TPM3-204ENST00000323144 COX8AP10176 69 aa6.41□□□□□ -1.38
TPM3-204ENST00000323144 PPDPFLQ8WWR9 84 aa6.41□□□□□ -1.38
TPM3-204ENST00000323144 FAM218AQ96MZ4 157 aa6.41□□□□□ -1.38
TPM3-204ENST00000323144 SCGB1D1O95968 90 aa6.39□□□□□ -1.39
TPM3-204ENST00000323144 Q6Q795 121 aa6.39□□□□□ -1.39
TPM3-204ENST00000323144 LST1O00453 97 aa6.38□□□□□ -1.39
TPM3-204ENST00000323144 CFC1P0CG37 223 aa6.38□□□□□ -1.39
TPM3-204ENST00000323144 SNHG12Q9BXW3 62 aa6.38□□□□□ -1.39
TPM3-204ENST00000323144 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
TPM3-204ENST00000323144 C2orf91Q6ZV80 131 aa6.37□□□□□ -1.39
TPM3-204ENST00000323144 Q96NJ1 140 aa6.37□□□□□ -1.39
TPM3-204ENST00000323144 TMEM238LA0A1B0GVL6 79 aa6.36□□□□□ -1.39
TPM3-204ENST00000323144 A0A087WSZ3 146 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 DLEU1O43261 78 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 SS18L2Q9UHA2 77 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 PAM16Q9Y3D7 125 aa6.35□□□□□ -1.39
TPM3-204ENST00000323144 A8MUU9 505 aa6.33□□□□□ -1.4
TPM3-204ENST00000323144 SMIM6P0DI80 62 aa6.33□□□□□ -1.4
TPM3-204ENST00000323144 NDUFV3P56181 108 aaKnown RBP6.33□□□□□ -1.4
TPM3-204ENST00000323144 DSCR10P59022 87 aa6.33□□□□□ -1.4
TPM3-204ENST00000323144 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
TPM3-204ENST00000323144 TEN1Q86WV5 123 aa6.32□□□□□ -1.4
TPM3-204ENST00000323144 SIGMAR1Q99720 223 aa6.32□□□□□ -1.4
TPM3-204ENST00000323144 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
TPM3-204ENST00000323144 A0A1B0GV72 72 aa6.31□□□□□ -1.4
TPM3-204ENST00000323144 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
TPM3-204ENST00000323144 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
TPM3-204ENST00000323144 FXYD2P54710 66 aa6.3□□□□□ -1.4
TPM3-204ENST00000323144 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
TPM3-204ENST00000323144 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
TPM3-204ENST00000323144 H0YGX0 51 aa6.29□□□□□ -1.4
TPM3-204ENST00000323144 H3BMG7 143 aa6.29□□□□□ -1.4
TPM3-204ENST00000323144 TRIAP1O43715 76 aa6.29□□□□□ -1.4
TPM3-204ENST00000323144 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
TPM3-204ENST00000323144 FABP2P12104 132 aa6.28□□□□□ -1.4
TPM3-204ENST00000323144 CEND1Q8N111 149 aa6.28□□□□□ -1.4
TPM3-204ENST00000323144 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
TPM3-204ENST00000323144 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
TPM3-204ENST00000323144 K7ERJ3 54 aa6.25□□□□□ -1.41
TPM3-204ENST00000323144 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
TPM3-204ENST00000323144 A0A1B0GX51 115 aa6.24□□□□□ -1.41
TPM3-204ENST00000323144 SNCGO76070 127 aa6.24□□□□□ -1.41
TPM3-204ENST00000323144 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
TPM3-204ENST00000323144 IGKV4-1P06312 121 aa6.22□□□□□ -1.41
TPM3-204ENST00000323144 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
TPM3-204ENST00000323144 MT2AP02795 61 aa6.21□□□□□ -1.42
TPM3-204ENST00000323144 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
TPM3-204ENST00000323144 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
TPM3-204ENST00000323144 DNAL4O96015 105 aa6.19□□□□□ -1.42
TPM3-204ENST00000323144 HRES1P13985 223 aa6.19□□□□□ -1.42
TPM3-204ENST00000323144 ORMDL1Q9P0S3 153 aa6.19□□□□□ -1.42
TPM3-204ENST00000323144 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
TPM3-204ENST00000323144 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
TPM3-204ENST00000323144 LINC00313P59037 77 aa6.18□□□□□ -1.42
TPM3-204ENST00000323144 HSD52Q0P140 79 aa6.18□□□□□ -1.42
TPM3-204ENST00000323144 ANKRD29Q8N6D5 301 aa6.18□□□□□ -1.42
TPM3-204ENST00000323144 USH2AO75445 5202 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
TPM3-204ENST00000323144 GHRHP01286 108 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 MT1FP04733 61 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 CCKP06307 115 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 MPLKIPQ8TAP9 179 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
TPM3-204ENST00000323144 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
TPM3-204ENST00000323144 TRACP01848 142 aa6.16□□□□□ -1.42
TPM3-204ENST00000323144 PSMB2P49721 201 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms