RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 ORMDL1Q9P0S3 153 aa12.57□□□□□ -0.4
YBX1-201ENST00000321358 LINC01547P58512 204 aaPredicted RBP12.56□□□□□ -0.4
YBX1-201ENST00000321358 A0A087X002 238 aa12.55□□□□□ -0.4
YBX1-201ENST00000321358 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
YBX1-201ENST00000321358 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
YBX1-201ENST00000321358 IGLV9-49A0A0B4J1Y8 123 aa12.53□□□□□ -0.4
YBX1-201ENST00000321358 TYMSOSQ8TAI1 123 aa12.53□□□□□ -0.4
YBX1-201ENST00000321358 F8WEM9 126 aa12.52□□□□□ -0.41
YBX1-201ENST00000321358 SPCS1Q9Y6A9 102 aa12.52□□□□□ -0.41
YBX1-201ENST00000321358 HERC1Q15751 4861 aa12.51□□□□□ -0.41
YBX1-201ENST00000321358 TMEM256-PLSCR3K7ERE1 68 aa12.51□□□□□ -0.41
YBX1-201ENST00000321358 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
YBX1-201ENST00000321358 J3QL48 77 aa12.5□□□□□ -0.41
YBX1-201ENST00000321358 KRTAP13-2Q52LG2 175 aa12.49□□□□□ -0.41
YBX1-201ENST00000321358 C3orf22Q8N5N4 141 aa12.49□□□□□ -0.41
YBX1-201ENST00000321358 MOBPQ13875 183 aa12.48□□□□□ -0.41
YBX1-201ENST00000321358 KRTAP10-8P60410 259 aa12.47□□□□□ -0.41
YBX1-201ENST00000321358 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
YBX1-201ENST00000321358 BAALC-AS2P0C853 105 aa12.47□□□□□ -0.41
YBX1-201ENST00000321358 SSBP3-AS1Q7Z2R9 100 aa12.47□□□□□ -0.41
YBX1-201ENST00000321358 Q8NBF4 154 aa12.46□□□□□ -0.42
YBX1-201ENST00000321358 H3BMG7 143 aa12.45□□□□□ -0.42
YBX1-201ENST00000321358 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
YBX1-201ENST00000321358 LRP1Q07954 4544 aaKnown RBP12.45□□□□□ -0.42
YBX1-201ENST00000321358 C9JAW5 83 aa12.44□□□□□ -0.42
YBX1-201ENST00000321358 GTF2H5Q6ZYL4 71 aa12.42□□□□□ -0.42
YBX1-201ENST00000321358 FAT3Q8TDW7 4589 aa12.42□□□□□ -0.42
YBX1-201ENST00000321358 MT1HL1P0DM35 61 aa12.42□□□□□ -0.42
YBX1-201ENST00000321358 UBE2V1Q13404 147 aa12.42□□□□□ -0.42
YBX1-201ENST00000321358 K7EP34 96 aa12.41□□□□□ -0.42
YBX1-201ENST00000321358 C4orf48Q5BLP8 95 aa12.4□□□□□ -0.42
YBX1-201ENST00000321358 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
YBX1-201ENST00000321358 Q6JHZ5 121 aa12.37□□□□□ -0.43
YBX1-201ENST00000321358 LINC00304Q8N9R0 145 aa12.37□□□□□ -0.43
YBX1-201ENST00000321358 IGLV8-61A0A075B6I0 122 aa12.35□□□□□ -0.43
YBX1-201ENST00000321358 H3BT86 120 aa12.35□□□□□ -0.43
YBX1-201ENST00000321358 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
YBX1-201ENST00000321358 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
YBX1-201ENST00000321358 A0A1B0GV72 72 aa12.32□□□□□ -0.44
YBX1-201ENST00000321358 TNXBP22105 4242 aa12.3□□□□□ -0.44
YBX1-201ENST00000321358 JMJD7-PLA2G4BH0Y9G9 81 aa12.3□□□□□ -0.44
YBX1-201ENST00000321358 RBM3P98179 157 aaKnown RBP12.3□□□□□ -0.44
YBX1-201ENST00000321358 SPINK1P00995 79 aa12.28□□□□□ -0.44
YBX1-201ENST00000321358 IGFL1Q6UW32 110 aa12.28□□□□□ -0.44
YBX1-201ENST00000321358 DSCR8Q96T75 97 aa12.27□□□□□ -0.44
YBX1-201ENST00000321358 CD164Q04900 197 aa12.27□□□□□ -0.45
YBX1-201ENST00000321358 HRCT1Q6UXD1 115 aa12.27□□□□□ -0.45
YBX1-201ENST00000321358 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
YBX1-201ENST00000321358 F8W1H4 67 aa12.24□□□□□ -0.45
YBX1-201ENST00000321358 A0A1B0GV90 55 aa12.22□□□□□ -0.45
YBX1-201ENST00000321358 PRO0461Q9UI25 63 aa12.21□□□□□ -0.45
YBX1-201ENST00000321358 RPS29P62273 56 aaKnown RBP12.2□□□□□ -0.46
YBX1-201ENST00000321358 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
YBX1-201ENST00000321358 PDE6GP18545 87 aa12.19□□□□□ -0.46
YBX1-201ENST00000321358 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
YBX1-201ENST00000321358 LIMD2Q9BT23 127 aa12.19□□□□□ -0.46
YBX1-201ENST00000321358 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
YBX1-201ENST00000321358 OBSCN-AS1Q96MR7 158 aa12.17□□□□□ -0.46
YBX1-201ENST00000321358 CCKP06307 115 aa12.16□□□□□ -0.46
YBX1-201ENST00000321358 Q6Q795 121 aa12.16□□□□□ -0.46
YBX1-201ENST00000321358 C14orf132Q9NPU4 83 aa12.16□□□□□ -0.46
YBX1-201ENST00000321358 TRBV7-7A0A0K0K1E9 115 aa12.15□□□□□ -0.46
YBX1-201ENST00000321358 VPS25Q9BRG1 176 aa12.15□□□□□ -0.46
YBX1-201ENST00000321358 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
YBX1-201ENST00000321358 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
YBX1-201ENST00000321358 A0A1W2PNM2 257 aa12.12□□□□□ -0.47
YBX1-201ENST00000321358 Q6ZQT0 140 aa12.11□□□□□ -0.47
YBX1-201ENST00000321358 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
YBX1-201ENST00000321358 Q5XG85 94 aa12.09□□□□□ -0.47
YBX1-201ENST00000321358 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
YBX1-201ENST00000321358 A0A087WSZ3 146 aa12.07□□□□□ -0.48
YBX1-201ENST00000321358 ETDBQ3ZM63 59 aa12.07□□□□□ -0.48
YBX1-201ENST00000321358 A0A1B0GW54 56 aa12.04□□□□□ -0.48
YBX1-201ENST00000321358 RETNLBQ9BQ08 111 aa12.03□□□□□ -0.48
YBX1-201ENST00000321358 PRR4Q16378 134 aa12.01□□□□□ -0.49
YBX1-201ENST00000321358 ASB16-AS1Q495Z4 193 aa12.01□□□□□ -0.49
YBX1-201ENST00000321358 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
YBX1-201ENST00000321358 C1orf195Q5TG92 126 aa11.96□□□□□ -0.5
YBX1-201ENST00000321358 IGLV7-46A0A075B6I9 117 aa11.92□□□□□ -0.5
YBX1-201ENST00000321358 NREPQ16612 68 aa11.89□□□□□ -0.51
YBX1-201ENST00000321358 LINC00472Q9H8W2 130 aa11.84□□□□□ -0.51
YBX1-201ENST00000321358 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
YBX1-201ENST00000321358 Q96NJ1 140 aa11.83□□□□□ -0.52
YBX1-201ENST00000321358 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
YBX1-201ENST00000321358 J3KT08 172 aa11.81□□□□□ -0.52
YBX1-201ENST00000321358 DEFB116Q30KQ4 102 aa11.81□□□□□ -0.52
YBX1-201ENST00000321358 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
YBX1-201ENST00000321358 UBR4Q5T4S7 5183 aa11.81□□□□□ -0.52
YBX1-201ENST00000321358 ACYP1P07311 99 aa11.79□□□□□ -0.52
YBX1-201ENST00000321358 LINC00846Q9NV44 126 aa11.79□□□□□ -0.52
YBX1-201ENST00000321358 J3QR89 54 aa11.77□□□□□ -0.52
YBX1-201ENST00000321358 TPRXLQ17RH7 258 aa11.77□□□□□ -0.52
YBX1-201ENST00000321358 Q6ZVQ6 151 aa11.76□□□□□ -0.53
YBX1-201ENST00000321358 FAM240AA0A1B0GVK7 77 aa11.75□□□□□ -0.53
YBX1-201ENST00000321358 NDUFB1O75438 58 aa11.73□□□□□ -0.53
YBX1-201ENST00000321358 BPY2O14599 106 aa11.72□□□□□ -0.53
YBX1-201ENST00000321358 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
YBX1-201ENST00000321358 KRTAP13-3Q3SY46 172 aa11.71□□□□□ -0.53
YBX1-201ENST00000321358 LRP2P98164 4655 aa11.7□□□□□ -0.54
YBX1-201ENST00000321358 C9orf92A6NGG3 77 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms