RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
SCAMP4-201ENST00000316097 TGP01266 2768 aa10.97□□□□□ -0.65
SCAMP4-201ENST00000316097 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
SCAMP4-201ENST00000316097 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-201ENST00000316097 ZCCHC13Q8WW36 166 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-201ENST00000316097 F8WDY8 70 aa10.94□□□□□ -0.66
SCAMP4-201ENST00000316097 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
SCAMP4-201ENST00000316097 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.93□□□□□ -0.66
SCAMP4-201ENST00000316097 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
SCAMP4-201ENST00000316097 PRR4Q16378 134 aa10.93□□□□□ -0.66
SCAMP4-201ENST00000316097 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
SCAMP4-201ENST00000316097 SPRR1AP35321 89 aa10.91□□□□□ -0.66
SCAMP4-201ENST00000316097 UBE2BP63146 152 aa10.9□□□□□ -0.67
SCAMP4-201ENST00000316097 HCG22E2RYF7 251 aa10.89□□□□□ -0.67
SCAMP4-201ENST00000316097 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
SCAMP4-201ENST00000316097 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
SCAMP4-201ENST00000316097 Q1T7F1 81 aa10.89□□□□□ -0.67
SCAMP4-201ENST00000316097 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
SCAMP4-201ENST00000316097 TLX1NBP0CAT3 122 aa10.88□□□□□ -0.67
SCAMP4-201ENST00000316097 KRTAP7-1Q8IUC3 87 aa10.87□□□□□ -0.67
SCAMP4-201ENST00000316097 V9GYY9 64 aa10.87□□□□□ -0.67
SCAMP4-201ENST00000316097 PSCAO43653 123 aa10.87□□□□□ -0.67
SCAMP4-201ENST00000316097 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
SCAMP4-201ENST00000316097 PSPHP1O15172 72 aa10.86□□□□□ -0.67
SCAMP4-201ENST00000316097 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
SCAMP4-201ENST00000316097 LINC00476Q8WZB0 136 aa10.85□□□□□ -0.67
SCAMP4-201ENST00000316097 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
SCAMP4-201ENST00000316097 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
SCAMP4-201ENST00000316097 CYP4F30PQ9H0H9 118 aa10.83□□□□□ -0.68
SCAMP4-201ENST00000316097 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
SCAMP4-201ENST00000316097 PRR15Q8IV56 129 aa10.82□□□□□ -0.68
SCAMP4-201ENST00000316097 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
SCAMP4-201ENST00000316097 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
SCAMP4-201ENST00000316097 IGFL1Q6UW32 110 aa10.8□□□□□ -0.68
SCAMP4-201ENST00000316097 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
SCAMP4-201ENST00000316097 NDUFB1O75438 58 aa10.78□□□□□ -0.68
SCAMP4-201ENST00000316097 REG3GQ6UW15 175 aa10.78□□□□□ -0.68
SCAMP4-201ENST00000316097 MP68P56378 58 aa10.78□□□□□ -0.68
SCAMP4-201ENST00000316097 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.68
SCAMP4-201ENST00000316097 A0A087WSZ3 146 aa10.77□□□□□ -0.69
SCAMP4-201ENST00000316097 LINC00208Q96KT6 92 aa10.76□□□□□ -0.69
SCAMP4-201ENST00000316097 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-201ENST00000316097 A8MUN3 132 aa10.74□□□□□ -0.69
SCAMP4-201ENST00000316097 IGKV2-24A0A0C4DH68 120 aa10.74□□□□□ -0.69
SCAMP4-201ENST00000316097 SEC61GP60059 68 aa10.73□□□□□ -0.69
SCAMP4-201ENST00000316097 PRLHP81277 87 aa10.73□□□□□ -0.69
SCAMP4-201ENST00000316097 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
SCAMP4-201ENST00000316097 A0A096LNI7 61 aa10.7□□□□□ -0.7
SCAMP4-201ENST00000316097 PMAIP1Q13794 54 aa10.7□□□□□ -0.7
SCAMP4-201ENST00000316097 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
SCAMP4-201ENST00000316097 H0Y9P7 68 aa10.69□□□□□ -0.7
SCAMP4-201ENST00000316097 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
SCAMP4-201ENST00000316097 LY6G6CO95867 125 aa10.68□□□□□ -0.7
SCAMP4-201ENST00000316097 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-201ENST00000316097 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-201ENST00000316097 CASC2Q6XLA1 102 aa10.66□□□□□ -0.7
SCAMP4-201ENST00000316097 A8MU10 97 aa10.66□□□□□ -0.7
SCAMP4-201ENST00000316097 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
SCAMP4-201ENST00000316097 Q5VV11 94 aa10.65□□□□□ -0.7
SCAMP4-201ENST00000316097 UBE2AP49459 152 aa10.64□□□□□ -0.71
SCAMP4-201ENST00000316097 SPANXA2-OT1Q8N9U9 137 aa10.62□□□□□ -0.71
SCAMP4-201ENST00000316097 Q6ZR54 194 aa10.62□□□□□ -0.71
SCAMP4-201ENST00000316097 C16orf90A8MZG2 172 aa10.61□□□□□ -0.71
SCAMP4-201ENST00000316097 C14orf177Q52M58 125 aa10.61□□□□□ -0.71
SCAMP4-201ENST00000316097 PANO1I0J062 215 aa10.61□□□□□ -0.71
SCAMP4-201ENST00000316097 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
SCAMP4-201ENST00000316097 WWC2-AS2Q96NR7 200 aa10.6□□□□□ -0.71
SCAMP4-201ENST00000316097 H3BPC8 53 aa10.59□□□□□ -0.71
SCAMP4-201ENST00000316097 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
SCAMP4-201ENST00000316097 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
SCAMP4-201ENST00000316097 A0A087WTM6 91 aa10.59□□□□□ -0.71
SCAMP4-201ENST00000316097 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
SCAMP4-201ENST00000316097 A8MWP4 228 aa10.58□□□□□ -0.72
SCAMP4-201ENST00000316097 PRR15LQ9BU68 103 aa10.57□□□□□ -0.72
SCAMP4-201ENST00000316097 LIMD2Q9BT23 127 aa10.56□□□□□ -0.72
SCAMP4-201ENST00000316097 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-201ENST00000316097 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
SCAMP4-201ENST00000316097 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-201ENST00000316097 LINC00472Q9H8W2 130 aa10.55□□□□□ -0.72
SCAMP4-201ENST00000316097 C1orf134Q5TEV5 83 aa10.54□□□□□ -0.72
SCAMP4-201ENST00000316097 H0Y9J4 135 aa10.53□□□□□ -0.72
SCAMP4-201ENST00000316097 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
SCAMP4-201ENST00000316097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.73
SCAMP4-201ENST00000316097 COA5Q86WW8 74 aa10.5□□□□□ -0.73
SCAMP4-201ENST00000316097 MMP24-AS1A0A0U1RRL7 71 aa10.49□□□□□ -0.73
SCAMP4-201ENST00000316097 RTL8CO15255 209 aa10.49□□□□□ -0.73
SCAMP4-201ENST00000316097 SPRR1BP22528 89 aa10.47□□□□□ -0.73
SCAMP4-201ENST00000316097 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
SCAMP4-201ENST00000316097 PCOTHQ58A44 107 aa10.46□□□□□ -0.73
SCAMP4-201ENST00000316097 DNAH17Q9UFH2 4485 aa10.46□□□□□ -0.74
SCAMP4-201ENST00000316097 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
SCAMP4-201ENST00000316097 A6NED7 52 aa10.44□□□□□ -0.74
SCAMP4-201ENST00000316097 Q75L30 129 aa10.43□□□□□ -0.74
SCAMP4-201ENST00000316097 DNAH6Q9C0G6 4158 aa10.43□□□□□ -0.74
SCAMP4-201ENST00000316097 LCA10Q71F78 164 aa10.43□□□□□ -0.74
SCAMP4-201ENST00000316097 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
SCAMP4-201ENST00000316097 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
SCAMP4-201ENST00000316097 LOC101927531A0A1B0GV80 90 aa10.41□□□□□ -0.74
SCAMP4-201ENST00000316097 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
SCAMP4-201ENST00000316097 CD164Q04900 197 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms