RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 IMUPQ9GZP8 106 aa10.21□□□□□ -0.78
CLCF1-201ENST00000312438 Q6JHZ5 121 aa10.2□□□□□ -0.78
CLCF1-201ENST00000312438 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
CLCF1-201ENST00000312438 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
CLCF1-201ENST00000312438 ZNF706Q9Y5V0 76 aaPredicted RBP10.19□□□□□ -0.78
CLCF1-201ENST00000312438 A0A1W2PNM2 257 aa10.18□□□□□ -0.78
CLCF1-201ENST00000312438 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
CLCF1-201ENST00000312438 Q6ZVQ6 151 aa10.17□□□□□ -0.78
CLCF1-201ENST00000312438 Q8NBF4 154 aa10.17□□□□□ -0.78
CLCF1-201ENST00000312438 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
CLCF1-201ENST00000312438 ATP5EP2Q5VTU8 51 aa10.16□□□□□ -0.78
CLCF1-201ENST00000312438 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
CLCF1-201ENST00000312438 PCP4P48539 62 aa10.15□□□□□ -0.78
CLCF1-201ENST00000312438 LINC00483Q53H64 154 aa10.15□□□□□ -0.78
CLCF1-201ENST00000312438 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
CLCF1-201ENST00000312438 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
CLCF1-201ENST00000312438 A0A1B0GVY2 172 aa10.14□□□□□ -0.79
CLCF1-201ENST00000312438 HAMPP81172 84 aa10.14□□□□□ -0.79
CLCF1-201ENST00000312438 SACSQ9NZJ4 4579 aa10.13□□□□□ -0.79
CLCF1-201ENST00000312438 CRYGAP11844 174 aa10.12□□□□□ -0.79
CLCF1-201ENST00000312438 NREPQ16612 68 aa10.12□□□□□ -0.79
CLCF1-201ENST00000312438 DNAH5Q8TE73 4624 aa10.12□□□□□ -0.79
CLCF1-201ENST00000312438 PKD1P98161 4303 aa10.11□□□□□ -0.79
CLCF1-201ENST00000312438 A0A0G2JQZ4 141 aa10.1□□□□□ -0.79
CLCF1-201ENST00000312438 CXCL6P80162 114 aa10.08□□□□□ -0.8
CLCF1-201ENST00000312438 DNAH8Q96JB1 4490 aa10.07□□□□□ -0.8
CLCF1-201ENST00000312438 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
CLCF1-201ENST00000312438 IGLV9-49A0A0B4J1Y8 123 aa10.06□□□□□ -0.8
CLCF1-201ENST00000312438 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
CLCF1-201ENST00000312438 HIST1H4AP62805 103 aaKnown RBP10.05□□□□□ -0.8
CLCF1-201ENST00000312438 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
CLCF1-201ENST00000312438 ANAPC11Q9NYG5 84 aa10.03□□□□□ -0.8
CLCF1-201ENST00000312438 A0A087WSZ3 146 aa10.01□□□□□ -0.81
CLCF1-201ENST00000312438 BPY2O14599 106 aa10.01□□□□□ -0.81
CLCF1-201ENST00000312438 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
CLCF1-201ENST00000312438 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
CLCF1-201ENST00000312438 A0A087WVE0 104 aa10□□□□□ -0.81
CLCF1-201ENST00000312438 MOBPQ13875 183 aa9.98□□□□□ -0.81
CLCF1-201ENST00000312438 ANAPC13Q9BS18 74 aa9.96□□□□□ -0.81
CLCF1-201ENST00000312438 RYR2Q92736 4967 aa9.96□□□□□ -0.82
CLCF1-201ENST00000312438 LRP1BQ9NZR2 4599 aa9.94□□□□□ -0.82
CLCF1-201ENST00000312438 SSBP3-AS1Q7Z2R9 100 aa9.93□□□□□ -0.82
CLCF1-201ENST00000312438 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
CLCF1-201ENST00000312438 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
CLCF1-201ENST00000312438 SMR3BP02814 79 aaPredicted RBP9.91□□□□□ -0.82
CLCF1-201ENST00000312438 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
CLCF1-201ENST00000312438 ATOX1O00244 68 aa9.89□□□□□ -0.83
CLCF1-201ENST00000312438 HRCT1Q6UXD1 115 aa9.89□□□□□ -0.83
CLCF1-201ENST00000312438 Q8N9L7 120 aa9.89□□□□□ -0.83
CLCF1-201ENST00000312438 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
CLCF1-201ENST00000312438 DSCR10P59022 87 aa9.89□□□□□ -0.83
CLCF1-201ENST00000312438 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
CLCF1-201ENST00000312438 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
CLCF1-201ENST00000312438 A0A087X002 238 aa9.86□□□□□ -0.83
CLCF1-201ENST00000312438 DEFB116Q30KQ4 102 aa9.86□□□□□ -0.83
CLCF1-201ENST00000312438 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
CLCF1-201ENST00000312438 CD164Q04900 197 aa9.86□□□□□ -0.83
CLCF1-201ENST00000312438 PKHD1P08F94 4074 aa9.85□□□□□ -0.83
CLCF1-201ENST00000312438 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
CLCF1-201ENST00000312438 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
CLCF1-201ENST00000312438 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
CLCF1-201ENST00000312438 J3KT08 172 aa9.82□□□□□ -0.84
CLCF1-201ENST00000312438 K7EQZ3 153 aa9.82□□□□□ -0.84
CLCF1-201ENST00000312438 KRTAP10-4P60372 401 aaPredicted RBP9.79□□□□□ -0.84
CLCF1-201ENST00000312438 Q96NJ1 140 aa9.78□□□□□ -0.84
CLCF1-201ENST00000312438 A8MWP4 228 aa9.77□□□□□ -0.84
CLCF1-201ENST00000312438 SERP2Q8N6R1 65 aa9.77□□□□□ -0.84
CLCF1-201ENST00000312438 PRR15Q8IV56 129 aa9.76□□□□□ -0.85
CLCF1-201ENST00000312438 SMIM20Q8N5G0 67 aa9.76□□□□□ -0.85
CLCF1-201ENST00000312438 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
CLCF1-201ENST00000312438 COX7CP15954 63 aa9.75□□□□□ -0.85
CLCF1-201ENST00000312438 UQCRQO14949 82 aa9.75□□□□□ -0.85
CLCF1-201ENST00000312438 NDUFB1O75438 58 aa9.75□□□□□ -0.85
CLCF1-201ENST00000312438 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
CLCF1-201ENST00000312438 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
CLCF1-201ENST00000312438 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
CLCF1-201ENST00000312438 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
CLCF1-201ENST00000312438 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
CLCF1-201ENST00000312438 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
CLCF1-201ENST00000312438 Q5XG85 94 aa9.72□□□□□ -0.85
CLCF1-201ENST00000312438 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.85
CLCF1-201ENST00000312438 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
CLCF1-201ENST00000312438 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
CLCF1-201ENST00000312438 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
CLCF1-201ENST00000312438 RYR3Q15413 4870 aa9.68□□□□□ -0.86
CLCF1-201ENST00000312438 SPINK1P00995 79 aa9.66□□□□□ -0.86
CLCF1-201ENST00000312438 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
CLCF1-201ENST00000312438 KRTAP29-1A8MX34 341 aaPredicted RBP9.65□□□□□ -0.86
CLCF1-201ENST00000312438 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
CLCF1-201ENST00000312438 OCR1Q9BZK8 76 aa9.65□□□□□ -0.86
CLCF1-201ENST00000312438 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
CLCF1-201ENST00000312438 A0A1B0GVX0 72 aa9.63□□□□□ -0.87
CLCF1-201ENST00000312438 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
CLCF1-201ENST00000312438 Q5VSD8 79 aa9.62□□□□□ -0.87
CLCF1-201ENST00000312438 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
CLCF1-201ENST00000312438 LINC00304Q8N9R0 145 aa9.61□□□□□ -0.87
CLCF1-201ENST00000312438 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
CLCF1-201ENST00000312438 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
CLCF1-201ENST00000312438 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
CLCF1-201ENST00000312438 C8orf17Q9NRJ1 99 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms