RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PHF5AQ7RTV0 110 aaKnown RBP15.94■□□□□ 0.14
HOXB3-201ENST00000311626 A0A0U1RQV1 116 aa15.91■□□□□ 0.14
HOXB3-201ENST00000311626 NDUFC1O43677 76 aa15.87■□□□□ 0.13
HOXB3-201ENST00000311626 SEC61GP60059 68 aa15.87■□□□□ 0.13
HOXB3-201ENST00000311626 CNBPP62633 177 aaKnown RBP15.86■□□□□ 0.13
HOXB3-201ENST00000311626 A0A087WSZ3 146 aa15.85■□□□□ 0.13
HOXB3-201ENST00000311626 A0A1B0GW54 56 aa15.85■□□□□ 0.13
HOXB3-201ENST00000311626 APLNQ9ULZ1 77 aa15.84■□□□□ 0.13
HOXB3-201ENST00000311626 LINC00474Q9P2X8 69 aa15.84■□□□□ 0.13
HOXB3-201ENST00000311626 UBE2AP49459 152 aa15.82■□□□□ 0.12
HOXB3-201ENST00000311626 RPL37AP61513 92 aaKnown RBP15.82■□□□□ 0.12
HOXB3-201ENST00000311626 FP248Q71RG6 208 aaPredicted RBP15.79■□□□□ 0.12
HOXB3-201ENST00000311626 PLECQ15149 4684 aaKnown RBP15.78■□□□□ 0.12
HOXB3-201ENST00000311626 WFDC13Q8IUB5 93 aa15.78■□□□□ 0.12
HOXB3-201ENST00000311626 PANO1I0J062 215 aa15.77■□□□□ 0.12
HOXB3-201ENST00000311626 FAM229BQ4G0N7 80 aa15.77■□□□□ 0.11
HOXB3-201ENST00000311626 HCG22E2RYF7 251 aa15.73■□□□□ 0.11
HOXB3-201ENST00000311626 SMIM26A0A096LP01 95 aa15.7■□□□□ 0.1
HOXB3-201ENST00000311626 LRCOL1A6NCL2 159 aa15.68■□□□□ 0.1
HOXB3-201ENST00000311626 IGLV8-61A0A075B6I0 122 aa15.67■□□□□ 0.1
HOXB3-201ENST00000311626 ATP5EP56381 51 aaPredicted RBP15.67■□□□□ 0.1
HOXB3-201ENST00000311626 C9orf163Q8N9P6 203 aa15.67■□□□□ 0.1
HOXB3-201ENST00000311626 C14orf177Q52M58 125 aa15.66■□□□□ 0.1
HOXB3-201ENST00000311626 LCE6AA0A183 80 aa15.64■□□□□ 0.1
HOXB3-201ENST00000311626 MPLKIPQ8TAP9 179 aa15.64■□□□□ 0.1
HOXB3-201ENST00000311626 DYNC2H1Q8NCM8 4307 aaKnown RBP15.64■□□□□ 0.09
HOXB3-201ENST00000311626 PRR4Q16378 134 aa15.64■□□□□ 0.09
HOXB3-201ENST00000311626 MDFIQ99750 246 aa15.64■□□□□ 0.09
HOXB3-201ENST00000311626 NBDYA0A0U1RRE5 68 aa15.63■□□□□ 0.09
HOXB3-201ENST00000311626 ZCCHC13Q8WW36 166 aaKnown RBP15.58■□□□□ 0.08
HOXB3-201ENST00000311626 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.58■□□□□ 0.08
HOXB3-201ENST00000311626 LINC00336Q6ZUF6 198 aa15.57■□□□□ 0.08
HOXB3-201ENST00000311626 Q6ZRN7 208 aaPredicted RBP15.56■□□□□ 0.08
HOXB3-201ENST00000311626 B9D2Q9BPU9 175 aa15.56■□□□□ 0.08
HOXB3-201ENST00000311626 SPRR1BP22528 89 aa15.54■□□□□ 0.08
HOXB3-201ENST00000311626 STARD9Q9P2P6 4700 aa15.54■□□□□ 0.08
HOXB3-201ENST00000311626 H0Y9J4 135 aa15.53■□□□□ 0.08
HOXB3-201ENST00000311626 IGLV9-49A0A0B4J1Y8 123 aa15.52■□□□□ 0.07
HOXB3-201ENST00000311626 LINC00472Q9H8W2 130 aa15.49■□□□□ 0.07
HOXB3-201ENST00000311626 KRTAP29-1A8MX34 341 aaPredicted RBP15.49■□□□□ 0.07
HOXB3-201ENST00000311626 CASC2Q6XLA1 102 aa15.49■□□□□ 0.07
HOXB3-201ENST00000311626 PRR15Q8IV56 129 aa15.48■□□□□ 0.07
HOXB3-201ENST00000311626 C1orf64Q8NEQ6 169 aa15.47■□□□□ 0.07
HOXB3-201ENST00000311626 LINC00208Q96KT6 92 aa15.47■□□□□ 0.07
HOXB3-201ENST00000311626 KRTAP13-1Q8IUC0 172 aa15.47■□□□□ 0.07
HOXB3-201ENST00000311626 hDV103S1A0JD37 113 aa15.44■□□□□ 0.06
HOXB3-201ENST00000311626 A8MWP4 228 aa15.43■□□□□ 0.06
HOXB3-201ENST00000311626 ANAPC11Q9NYG5 84 aa15.43■□□□□ 0.06
HOXB3-201ENST00000311626 NUPR2A6NF83 97 aa15.42■□□□□ 0.06
HOXB3-201ENST00000311626 SPACA4Q8TDM5 124 aa15.42■□□□□ 0.06
HOXB3-201ENST00000311626 MP68P56378 58 aa15.41■□□□□ 0.06
HOXB3-201ENST00000311626 FRAS1Q86XX4 4008 aa15.4■□□□□ 0.06
HOXB3-201ENST00000311626 KMT2AQ03164 3969 aa15.4■□□□□ 0.06
HOXB3-201ENST00000311626 VPS13DQ5THJ4 4388 aa15.39■□□□□ 0.05
HOXB3-201ENST00000311626 HECTD4Q9Y4D8 3996 aa15.38■□□□□ 0.05
HOXB3-201ENST00000311626 PRKDCP78527 4128 aaKnown RBP15.38■□□□□ 0.05
HOXB3-201ENST00000311626 H0Y9P7 68 aa15.38■□□□□ 0.05
HOXB3-201ENST00000311626 A0A087WTM6 91 aa15.36■□□□□ 0.05
HOXB3-201ENST00000311626 V9GYY9 64 aa15.36■□□□□ 0.05
HOXB3-201ENST00000311626 TRAV22A0A0B4J277 110 aa15.35■□□□□ 0.05
HOXB3-201ENST00000311626 MMP24-AS1A0A0U1RRL7 71 aa15.31■□□□□ 0.04
HOXB3-201ENST00000311626 BRK1Q8WUW1 75 aa15.31■□□□□ 0.04
HOXB3-201ENST00000311626 PSORS1C2Q9UIG4 136 aa15.3■□□□□ 0.04
HOXB3-201ENST00000311626 PKIGQ9Y2B9 76 aa15.3■□□□□ 0.04
HOXB3-201ENST00000311626 DNAH2Q9P225 4427 aa15.3■□□□□ 0.04
HOXB3-201ENST00000311626 RTL8CO15255 209 aa15.3■□□□□ 0.04
HOXB3-201ENST00000311626 MOBPQ13875 183 aa15.29■□□□□ 0.04
HOXB3-201ENST00000311626 Q96NJ1 140 aa15.29■□□□□ 0.04
HOXB3-201ENST00000311626 TGP01266 2768 aa15.29■□□□□ 0.04
HOXB3-201ENST00000311626 DNAH8Q96JB1 4490 aa15.28■□□□□ 0.04
HOXB3-201ENST00000311626 PRO0628Q9UI54 55 aa15.26■□□□□ 0.03
HOXB3-201ENST00000311626 NDUFB1O75438 58 aa15.24■□□□□ 0.03
HOXB3-201ENST00000311626 CYP4F30PQ9H0H9 118 aa15.24■□□□□ 0.03
HOXB3-201ENST00000311626 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
HOXB3-201ENST00000311626 C4orf48Q5BLP8 95 aa15.2■□□□□ 0.02
HOXB3-201ENST00000311626 WWC2-AS2Q96NR7 200 aa15.2■□□□□ 0.02
HOXB3-201ENST00000311626 IGLV5-52A0A0A0MRZ9 124 aa15.2■□□□□ 0.02
HOXB3-201ENST00000311626 PSPHP1O15172 72 aa15.2■□□□□ 0.02
HOXB3-201ENST00000311626 MEGF8Q7Z7M0 2845 aa15.2■□□□□ 0.02
HOXB3-201ENST00000311626 IGHV6-1A0A0B4J1U7 121 aa15.19■□□□□ 0.02
HOXB3-201ENST00000311626 LINC00483Q53H64 154 aa15.19■□□□□ 0.02
HOXB3-201ENST00000311626 DNAH17Q9UFH2 4485 aa15.18■□□□□ 0.02
HOXB3-201ENST00000311626 PCOTHQ58A44 107 aa15.14■□□□□ 0.01
HOXB3-201ENST00000311626 A0A087X002 238 aa15.14■□□□□ 0.01
HOXB3-201ENST00000311626 NOTCH2NLQ7Z3S9 236 aa15.14■□□□□ 0.01
HOXB3-201ENST00000311626 C8orf17Q9NRJ1 99 aa15.13■□□□□ 0.01
HOXB3-201ENST00000311626 NDUFS5O43920 106 aa15.13■□□□□ 0.01
HOXB3-201ENST00000311626 ZNF861PO60384 105 aa15.12■□□□□ 0.01
HOXB3-201ENST00000311626 Q6ZR54 194 aa15.12■□□□□ 0.01
HOXB3-201ENST00000311626 Q1T7F1 81 aa15.11■□□□□ 0.01
HOXB3-201ENST00000311626 PLAC8Q9NZF1 115 aa15.11■□□□□ 0.01
HOXB3-201ENST00000311626 ZNF706Q9Y5V0 76 aaPredicted RBP15.1■□□□□ 0.01
HOXB3-201ENST00000311626 H3BPC8 53 aa15.09■□□□□ 0.01
HOXB3-201ENST00000311626 SPINK6Q6UWN8 80 aa15.08■□□□□ 0
HOXB3-201ENST00000311626 A0A1B0GVX0 72 aa15.06■□□□□ 0
HOXB3-201ENST00000311626 DNAH6Q9C0G6 4158 aa15.04■□□□□ -0
HOXB3-201ENST00000311626 CDK2AP2O75956 126 aa15.04■□□□□ -0
HOXB3-201ENST00000311626 SPANXA2-OT1Q8N9U9 137 aa15.04■□□□□ -0
HOXB3-201ENST00000311626 ASB16-AS1Q495Z4 193 aa15.03■□□□□ -0
HOXB3-201ENST00000311626 A8MUN3 132 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms