RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
NPAS4-201ENST00000311034 LINC00208Q96KT6 92 aa8.67□□□□□ -1.02
NPAS4-201ENST00000311034 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
NPAS4-201ENST00000311034 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
NPAS4-201ENST00000311034 REG3GQ6UW15 175 aa8.66□□□□□ -1.02
NPAS4-201ENST00000311034 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
NPAS4-201ENST00000311034 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
NPAS4-201ENST00000311034 H3BNG1 76 aa8.64□□□□□ -1.03
NPAS4-201ENST00000311034 MP68P56378 58 aa8.64□□□□□ -1.03
NPAS4-201ENST00000311034 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
NPAS4-201ENST00000311034 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
NPAS4-201ENST00000311034 IGFL1Q6UW32 110 aa8.63□□□□□ -1.03
NPAS4-201ENST00000311034 TNP2Q05952 138 aa8.62□□□□□ -1.03
NPAS4-201ENST00000311034 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
NPAS4-201ENST00000311034 V9GYY9 64 aa8.6□□□□□ -1.03
NPAS4-201ENST00000311034 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
NPAS4-201ENST00000311034 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
NPAS4-201ENST00000311034 A8MUN3 132 aa8.59□□□□□ -1.04
NPAS4-201ENST00000311034 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
NPAS4-201ENST00000311034 F8WDY8 70 aa8.58□□□□□ -1.04
NPAS4-201ENST00000311034 SPRR1AP35321 89 aa8.58□□□□□ -1.04
NPAS4-201ENST00000311034 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
NPAS4-201ENST00000311034 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
NPAS4-201ENST00000311034 H0Y9P7 68 aa8.56□□□□□ -1.04
NPAS4-201ENST00000311034 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
NPAS4-201ENST00000311034 A0A1B0GW54 56 aa8.55□□□□□ -1.04
NPAS4-201ENST00000311034 PLA2G2DQ9UNK4 145 aa8.55□□□□□ -1.04
NPAS4-201ENST00000311034 ANK2Q01484 3957 aa8.55□□□□□ -1.04
NPAS4-201ENST00000311034 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
NPAS4-201ENST00000311034 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
NPAS4-201ENST00000311034 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
NPAS4-201ENST00000311034 K7EIL1 84 aa8.53□□□□□ -1.04
NPAS4-201ENST00000311034 NDUFB1O75438 58 aa8.52□□□□□ -1.04
NPAS4-201ENST00000311034 A8MU10 97 aa8.52□□□□□ -1.05
NPAS4-201ENST00000311034 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
NPAS4-201ENST00000311034 LCE6AA0A183 80 aa8.51□□□□□ -1.05
NPAS4-201ENST00000311034 IGHV6-1A0A0B4J1U7 121 aa8.51□□□□□ -1.05
NPAS4-201ENST00000311034 CHKB-CPT1BH3BT56 60 aa8.51□□□□□ -1.05
NPAS4-201ENST00000311034 Q1T7F1 81 aa8.5□□□□□ -1.05
NPAS4-201ENST00000311034 FBN3Q75N90 2809 aa8.5□□□□□ -1.05
NPAS4-201ENST00000311034 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
NPAS4-201ENST00000311034 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
NPAS4-201ENST00000311034 SEC61GP60059 68 aa8.47□□□□□ -1.05
NPAS4-201ENST00000311034 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.05
NPAS4-201ENST00000311034 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
NPAS4-201ENST00000311034 CYP4F30PQ9H0H9 118 aa8.45□□□□□ -1.06
NPAS4-201ENST00000311034 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
NPAS4-201ENST00000311034 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
NPAS4-201ENST00000311034 PANO1I0J062 215 aa8.43□□□□□ -1.06
NPAS4-201ENST00000311034 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
NPAS4-201ENST00000311034 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
NPAS4-201ENST00000311034 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
NPAS4-201ENST00000311034 MDFIQ99750 246 aa8.42□□□□□ -1.06
NPAS4-201ENST00000311034 LYSTQ99698 3801 aa8.42□□□□□ -1.06
NPAS4-201ENST00000311034 A6NED7 52 aa8.41□□□□□ -1.06
NPAS4-201ENST00000311034 A8MWP4 228 aa8.4□□□□□ -1.06
NPAS4-201ENST00000311034 MOBPQ13875 183 aa8.4□□□□□ -1.06
NPAS4-201ENST00000311034 Q5VV11 94 aa8.39□□□□□ -1.07
NPAS4-201ENST00000311034 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
NPAS4-201ENST00000311034 LY6G6CO95867 125 aa8.38□□□□□ -1.07
NPAS4-201ENST00000311034 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
NPAS4-201ENST00000311034 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
NPAS4-201ENST00000311034 COA5Q86WW8 74 aa8.37□□□□□ -1.07
NPAS4-201ENST00000311034 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
NPAS4-201ENST00000311034 LINC00472Q9H8W2 130 aa8.34□□□□□ -1.07
NPAS4-201ENST00000311034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
NPAS4-201ENST00000311034 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
NPAS4-201ENST00000311034 LIMD2Q9BT23 127 aa8.33□□□□□ -1.08
NPAS4-201ENST00000311034 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
NPAS4-201ENST00000311034 SPANXA2-OT1Q8N9U9 137 aa8.3□□□□□ -1.08
NPAS4-201ENST00000311034 H3BPC8 53 aa8.29□□□□□ -1.08
NPAS4-201ENST00000311034 CD164Q04900 197 aa8.28□□□□□ -1.08
NPAS4-201ENST00000311034 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.09
NPAS4-201ENST00000311034 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
NPAS4-201ENST00000311034 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
NPAS4-201ENST00000311034 LCA10Q71F78 164 aa8.24□□□□□ -1.09
NPAS4-201ENST00000311034 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
NPAS4-201ENST00000311034 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
NPAS4-201ENST00000311034 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
NPAS4-201ENST00000311034 SPINK1P00995 79 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 A0A087X002 238 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 SPRR1BP22528 89 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
NPAS4-201ENST00000311034 APLNQ9ULZ1 77 aa8.21□□□□□ -1.1
NPAS4-201ENST00000311034 RTL8CO15255 209 aa8.2□□□□□ -1.1
NPAS4-201ENST00000311034 FLG2Q5D862 2391 aaPredicted RBP8.2□□□□□ -1.1
NPAS4-201ENST00000311034 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
NPAS4-201ENST00000311034 CMYA5Q8N3K9 4069 aa8.19□□□□□ -1.1
NPAS4-201ENST00000311034 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
NPAS4-201ENST00000311034 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
NPAS4-201ENST00000311034 DNAH1Q9P2D7 4330 aa8.18□□□□□ -1.1
NPAS4-201ENST00000311034 Q75L30 129 aa8.18□□□□□ -1.1
NPAS4-201ENST00000311034 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
NPAS4-201ENST00000311034 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
NPAS4-201ENST00000311034 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
NPAS4-201ENST00000311034 Q96NJ1 140 aa8.16□□□□□ -1.1
NPAS4-201ENST00000311034 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.1
NPAS4-201ENST00000311034 IGKV2-30P06310 120 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms