RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 Q8NBF4 154 aa14.47□□□□□ -0.09
SNCB-201ENST00000310112 CIRBP-AS1Q8TBR5 109 aa14.47□□□□□ -0.09
SNCB-201ENST00000310112 KRTAP10-1P60331 282 aa14.46□□□□□ -0.1
SNCB-201ENST00000310112 FAM30AQ9NZY2 134 aa14.46□□□□□ -0.1
SNCB-201ENST00000310112 Q6ZVQ6 151 aa14.45□□□□□ -0.1
SNCB-201ENST00000310112 SPRR4Q96PI1 79 aa14.44□□□□□ -0.1
SNCB-201ENST00000310112 FRAS1Q86XX4 4008 aa14.43□□□□□ -0.1
SNCB-201ENST00000310112 A0A1W2PNM2 257 aa14.42□□□□□ -0.1
SNCB-201ENST00000310112 SCXQ7RTU7 201 aa14.42□□□□□ -0.1
SNCB-201ENST00000310112 LINC00483Q53H64 154 aa14.41□□□□□ -0.1
SNCB-201ENST00000310112 IGLV7-43P04211 117 aa14.4□□□□□ -0.1
SNCB-201ENST00000310112 IGKV3D-7A0A0C4DH55 119 aa14.39□□□□□ -0.11
SNCB-201ENST00000310112 CXCL6P80162 114 aa14.39□□□□□ -0.11
SNCB-201ENST00000310112 IGFL1Q6UW32 110 aa14.38□□□□□ -0.11
SNCB-201ENST00000310112 CRYGAP11844 174 aa14.37□□□□□ -0.11
SNCB-201ENST00000310112 RPL37AP61513 92 aaKnown RBP14.36□□□□□ -0.11
SNCB-201ENST00000310112 NREPQ16612 68 aa14.36□□□□□ -0.11
SNCB-201ENST00000310112 HAMPP81172 84 aa14.34□□□□□ -0.11
SNCB-201ENST00000310112 DNAH11Q96DT5 4516 aa14.3□□□□□ -0.12
SNCB-201ENST00000310112 A0A1B0GVY2 172 aa14.27□□□□□ -0.12
SNCB-201ENST00000310112 HYDINQ4G0P3 5121 aa14.27□□□□□ -0.13
SNCB-201ENST00000310112 FAM236AA0A1B0GUQ0 79 aa14.26□□□□□ -0.13
SNCB-201ENST00000310112 FAM236BA0A1B0GV22 79 aa14.26□□□□□ -0.13
SNCB-201ENST00000310112 HIST1H4AP62805 103 aaKnown RBP14.25□□□□□ -0.13
SNCB-201ENST00000310112 DNAH8Q96JB1 4490 aa14.25□□□□□ -0.13
SNCB-201ENST00000310112 FAT2Q9NYQ8 4349 aa14.24□□□□□ -0.13
SNCB-201ENST00000310112 BPY2O14599 106 aa14.22□□□□□ -0.13
SNCB-201ENST00000310112 ANAPC13Q9BS18 74 aa14.22□□□□□ -0.13
SNCB-201ENST00000310112 C9orf153Q5TBE3 101 aa14.21□□□□□ -0.14
SNCB-201ENST00000310112 DNAH5Q8TE73 4624 aa14.21□□□□□ -0.14
SNCB-201ENST00000310112 PKD1P98161 4303 aa14.2□□□□□ -0.14
SNCB-201ENST00000310112 SACSQ9NZJ4 4579 aa14.2□□□□□ -0.14
SNCB-201ENST00000310112 IGLV9-49A0A0B4J1Y8 123 aa14.19□□□□□ -0.14
SNCB-201ENST00000310112 ATOX1O00244 68 aa14.17□□□□□ -0.14
SNCB-201ENST00000310112 A0A087WSZ3 146 aa14.16□□□□□ -0.14
SNCB-201ENST00000310112 A0A0G2JQZ4 141 aa14.16□□□□□ -0.14
SNCB-201ENST00000310112 A0A087WVE0 104 aa14.15□□□□□ -0.14
SNCB-201ENST00000310112 MOBPQ13875 183 aa14.11□□□□□ -0.15
SNCB-201ENST00000310112 FAM229BQ4G0N7 80 aa14.1□□□□□ -0.15
SNCB-201ENST00000310112 SSBP3-AS1Q7Z2R9 100 aa14.1□□□□□ -0.15
SNCB-201ENST00000310112 IGKV4-1P06312 121 aa14.08□□□□□ -0.16
SNCB-201ENST00000310112 SS18L2Q9UHA2 77 aa14.08□□□□□ -0.16
SNCB-201ENST00000310112 ANAPC11Q9NYG5 84 aa14.06□□□□□ -0.16
SNCB-201ENST00000310112 CD164Q04900 197 aa14.04□□□□□ -0.16
SNCB-201ENST00000310112 J3KT08 172 aa14.02□□□□□ -0.17
SNCB-201ENST00000310112 SMIM20Q8N5G0 67 aa14.02□□□□□ -0.17
SNCB-201ENST00000310112 DSCR10P59022 87 aa14.01□□□□□ -0.17
SNCB-201ENST00000310112 SPINK6Q6UWN8 80 aa14.01□□□□□ -0.17
SNCB-201ENST00000310112 LINC00472Q9H8W2 130 aa14□□□□□ -0.17
SNCB-201ENST00000310112 SRRM2Q9UQ35 2752 aaKnown RBP13.99□□□□□ -0.17
SNCB-201ENST00000310112 SERP2Q8N6R1 65 aa13.96□□□□□ -0.17
SNCB-201ENST00000310112 Q8N9L7 120 aa13.96□□□□□ -0.17
SNCB-201ENST00000310112 COX7CP15954 63 aa13.95□□□□□ -0.18
SNCB-201ENST00000310112 UQCRQO14949 82 aa13.94□□□□□ -0.18
SNCB-201ENST00000310112 RYR2Q92736 4967 aa13.93□□□□□ -0.18
SNCB-201ENST00000310112 KRTAP1-4P0C5Y4 121 aa13.93□□□□□ -0.18
SNCB-201ENST00000310112 K7EQZ3 153 aa13.91□□□□□ -0.18
SNCB-201ENST00000310112 HRCT1Q6UXD1 115 aa13.91□□□□□ -0.18
SNCB-201ENST00000310112 A8MWP4 228 aa13.9□□□□□ -0.18
SNCB-201ENST00000310112 TRAV7A0A075B6U4 112 aa13.89□□□□□ -0.19
SNCB-201ENST00000310112 A0A087X002 238 aa13.88□□□□□ -0.19
SNCB-201ENST00000310112 KRTAP13-2Q52LG2 175 aa13.88□□□□□ -0.19
SNCB-201ENST00000310112 DEFB116Q30KQ4 102 aa13.87□□□□□ -0.19
SNCB-201ENST00000310112 NDUFB1O75438 58 aa13.86□□□□□ -0.19
SNCB-201ENST00000310112 ASB16-AS1Q495Z4 193 aa13.86□□□□□ -0.19
SNCB-201ENST00000310112 PRR15Q8IV56 129 aa13.86□□□□□ -0.19
SNCB-201ENST00000310112 CCDC179H3BU77 68 aa13.85□□□□□ -0.19
SNCB-201ENST00000310112 Q96NJ1 140 aa13.85□□□□□ -0.19
SNCB-201ENST00000310112 LRP1BQ9NZR2 4599 aa13.85□□□□□ -0.19
SNCB-201ENST00000310112 SMR3BP02814 79 aaPredicted RBP13.84□□□□□ -0.19
SNCB-201ENST00000310112 PLA2G1BP04054 148 aaKnown RBP13.84□□□□□ -0.19
SNCB-201ENST00000310112 HCG22E2RYF7 251 aa13.83□□□□□ -0.19
SNCB-201ENST00000310112 Q5XG85 94 aa13.83□□□□□ -0.2
SNCB-201ENST00000310112 DYNC1H1Q14204 4646 aaKnown RBP13.8□□□□□ -0.2
SNCB-201ENST00000310112 KRTAP10-4P60372 401 aaPredicted RBP13.79□□□□□ -0.2
SNCB-201ENST00000310112 PKHD1P08F94 4074 aa13.78□□□□□ -0.2
SNCB-201ENST00000310112 CDK2AP2O75956 126 aa13.77□□□□□ -0.21
SNCB-201ENST00000310112 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.21
SNCB-201ENST00000310112 LIMD2Q9BT23 127 aa13.75□□□□□ -0.21
SNCB-201ENST00000310112 OCR1Q9BZK8 76 aa13.74□□□□□ -0.21
SNCB-201ENST00000310112 FAM229AH3BQW9 127 aa13.72□□□□□ -0.21
SNCB-201ENST00000310112 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
SNCB-201ENST00000310112 VPS13BQ7Z7G8 4022 aa13.72□□□□□ -0.21
SNCB-201ENST00000310112 KMT2CQ8NEZ4 4911 aaKnown RBP13.71□□□□□ -0.21
SNCB-201ENST00000310112 KRTAP29-1A8MX34 341 aaPredicted RBP13.71□□□□□ -0.22
SNCB-201ENST00000310112 A0A1B0GVX0 72 aa13.7□□□□□ -0.22
SNCB-201ENST00000310112 CASC2Q6XLA1 102 aa13.7□□□□□ -0.22
SNCB-201ENST00000310112 SPINK1P00995 79 aa13.69□□□□□ -0.22
SNCB-201ENST00000310112 SPAG11AQ6PDA7 123 aa13.69□□□□□ -0.22
SNCB-201ENST00000310112 RPS29P62273 56 aaKnown RBP13.68□□□□□ -0.22
SNCB-201ENST00000310112 MMP24-AS1A0A0U1RRL7 71 aa13.66□□□□□ -0.22
SNCB-201ENST00000310112 WFDC13Q8IUB5 93 aa13.66□□□□□ -0.22
SNCB-201ENST00000310112 PRR26Q8N8Z3 221 aa13.63□□□□□ -0.23
SNCB-201ENST00000310112 C8orf17Q9NRJ1 99 aa13.63□□□□□ -0.23
SNCB-201ENST00000310112 APOBP04114 4563 aaKnown RBP13.63□□□□□ -0.23
SNCB-201ENST00000310112 hDV103S1A0JD37 113 aa13.61□□□□□ -0.23
SNCB-201ENST00000310112 C20orf197Q8N268 126 aa13.6□□□□□ -0.23
SNCB-201ENST00000310112 LINC00304Q8N9R0 145 aa13.6□□□□□ -0.23
SNCB-201ENST00000310112 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
SNCB-201ENST00000310112 IGHV6-1A0A0B4J1U7 121 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms