RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 HAMPP81172 84 aa8.59□□□□□ -1.03
EIF3F-201ENST00000309828 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
EIF3F-201ENST00000309828 Q6ZQT0 140 aa8.59□□□□□ -1.03
EIF3F-201ENST00000309828 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
EIF3F-201ENST00000309828 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
EIF3F-201ENST00000309828 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
EIF3F-201ENST00000309828 IGLV8-61A0A075B6I0 122 aa8.56□□□□□ -1.04
EIF3F-201ENST00000309828 XGP55808 180 aa8.56□□□□□ -1.04
EIF3F-201ENST00000309828 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
EIF3F-201ENST00000309828 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
EIF3F-201ENST00000309828 A0A1B0GW54 56 aa8.52□□□□□ -1.05
EIF3F-201ENST00000309828 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
EIF3F-201ENST00000309828 Q6JHZ5 121 aa8.52□□□□□ -1.05
EIF3F-201ENST00000309828 Q8NBF4 154 aa8.48□□□□□ -1.05
EIF3F-201ENST00000309828 LINC00846Q9NV44 126 aa8.48□□□□□ -1.05
EIF3F-201ENST00000309828 HERC2O95714 4834 aa8.48□□□□□ -1.05
EIF3F-201ENST00000309828 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
EIF3F-201ENST00000309828 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
EIF3F-201ENST00000309828 A0A1W2PNM2 257 aa8.46□□□□□ -1.06
EIF3F-201ENST00000309828 CDK2AP2O75956 126 aa8.46□□□□□ -1.06
EIF3F-201ENST00000309828 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
EIF3F-201ENST00000309828 LINC00643Q86TS7 51 aa8.46□□□□□ -1.06
EIF3F-201ENST00000309828 LRP1BQ9NZR2 4599 aa8.46□□□□□ -1.06
EIF3F-201ENST00000309828 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
EIF3F-201ENST00000309828 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
EIF3F-201ENST00000309828 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
EIF3F-201ENST00000309828 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
EIF3F-201ENST00000309828 Q6Q795 121 aa8.44□□□□□ -1.06
EIF3F-201ENST00000309828 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
EIF3F-201ENST00000309828 PKHD1P08F94 4074 aa8.43□□□□□ -1.06
EIF3F-201ENST00000309828 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
EIF3F-201ENST00000309828 CRYGAP11844 174 aa8.43□□□□□ -1.06
EIF3F-201ENST00000309828 SIGMAR1Q99720 223 aa8.43□□□□□ -1.06
EIF3F-201ENST00000309828 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
EIF3F-201ENST00000309828 MOBPQ13875 183 aa8.4□□□□□ -1.06
EIF3F-201ENST00000309828 ATP5EP2Q5VTU8 51 aa8.4□□□□□ -1.06
EIF3F-201ENST00000309828 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
EIF3F-201ENST00000309828 TRBV7-7A0A0K0K1E9 115 aa8.39□□□□□ -1.07
EIF3F-201ENST00000309828 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
EIF3F-201ENST00000309828 Q6ZVQ6 151 aa8.39□□□□□ -1.07
EIF3F-201ENST00000309828 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
EIF3F-201ENST00000309828 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
EIF3F-201ENST00000309828 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
EIF3F-201ENST00000309828 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
EIF3F-201ENST00000309828 A0A0G2JQZ4 141 aa8.37□□□□□ -1.07
EIF3F-201ENST00000309828 NREPQ16612 68 aa8.37□□□□□ -1.07
EIF3F-201ENST00000309828 KIAA1109Q2LD37 5005 aa8.37□□□□□ -1.07
EIF3F-201ENST00000309828 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
EIF3F-201ENST00000309828 CD164Q04900 197 aa8.34□□□□□ -1.07
EIF3F-201ENST00000309828 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
EIF3F-201ENST00000309828 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
EIF3F-201ENST00000309828 A0A087WSZ3 146 aa8.33□□□□□ -1.08
EIF3F-201ENST00000309828 A0A087X002 238 aa8.33□□□□□ -1.08
EIF3F-201ENST00000309828 CXCL6P80162 114 aa8.33□□□□□ -1.08
EIF3F-201ENST00000309828 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
EIF3F-201ENST00000309828 IGKV3D-7A0A0C4DH55 119 aa8.3□□□□□ -1.08
EIF3F-201ENST00000309828 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
EIF3F-201ENST00000309828 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
EIF3F-201ENST00000309828 Q5VSD8 79 aa8.29□□□□□ -1.08
EIF3F-201ENST00000309828 BPY2O14599 106 aa8.28□□□□□ -1.08
EIF3F-201ENST00000309828 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
EIF3F-201ENST00000309828 TYMSOSQ8TAI1 123 aa8.27□□□□□ -1.09
EIF3F-201ENST00000309828 HRCT1Q6UXD1 115 aa8.26□□□□□ -1.09
EIF3F-201ENST00000309828 RYR1P21817 5038 aa8.26□□□□□ -1.09
EIF3F-201ENST00000309828 Q8N1X5 172 aa8.24□□□□□ -1.09
EIF3F-201ENST00000309828 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
EIF3F-201ENST00000309828 J3KT08 172 aa8.22□□□□□ -1.09
EIF3F-201ENST00000309828 ASB16-AS1Q495Z4 193 aa8.22□□□□□ -1.09
EIF3F-201ENST00000309828 Q5XG85 94 aa8.22□□□□□ -1.09
EIF3F-201ENST00000309828 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
EIF3F-201ENST00000309828 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.1
EIF3F-201ENST00000309828 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
EIF3F-201ENST00000309828 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
EIF3F-201ENST00000309828 SPINK1P00995 79 aa8.19□□□□□ -1.1
EIF3F-201ENST00000309828 DSCR10P59022 87 aa8.19□□□□□ -1.1
EIF3F-201ENST00000309828 LIMD2Q9BT23 127 aa8.19□□□□□ -1.1
EIF3F-201ENST00000309828 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
EIF3F-201ENST00000309828 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
EIF3F-201ENST00000309828 Q96NJ1 140 aa8.18□□□□□ -1.1
EIF3F-201ENST00000309828 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
EIF3F-201ENST00000309828 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
EIF3F-201ENST00000309828 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
EIF3F-201ENST00000309828 HSPG2P98160 4391 aa8.16□□□□□ -1.1
EIF3F-201ENST00000309828 ABCA13Q86UQ4 5058 aa8.15□□□□□ -1.1
EIF3F-201ENST00000309828 A0A087WVE0 104 aa8.15□□□□□ -1.1
EIF3F-201ENST00000309828 A8MWP4 228 aa8.15□□□□□ -1.1
EIF3F-201ENST00000309828 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
EIF3F-201ENST00000309828 FAT1Q14517 4588 aa8.14□□□□□ -1.11
EIF3F-201ENST00000309828 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
EIF3F-201ENST00000309828 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
EIF3F-201ENST00000309828 NDUFB1O75438 58 aa8.13□□□□□ -1.11
EIF3F-201ENST00000309828 Q8N9L7 120 aa8.13□□□□□ -1.11
EIF3F-201ENST00000309828 K7EQZ3 153 aa8.12□□□□□ -1.11
EIF3F-201ENST00000309828 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
EIF3F-201ENST00000309828 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
EIF3F-201ENST00000309828 ATOX1O00244 68 aa8.08□□□□□ -1.12
EIF3F-201ENST00000309828 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
EIF3F-201ENST00000309828 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
EIF3F-201ENST00000309828 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
EIF3F-201ENST00000309828 OXTP01178 125 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms