RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CFC1P0CG37 223 aa10.92□□□□□ -0.66
PDZRN3-202ENST00000308537 HRCT1Q6UXD1 115 aa10.92□□□□□ -0.66
PDZRN3-202ENST00000308537 LINC00575Q6W349 94 aa10.92□□□□□ -0.66
PDZRN3-202ENST00000308537 hADV29S1A0JD25 119 aa10.91□□□□□ -0.66
PDZRN3-202ENST00000308537 H7C2G1 150 aa10.9□□□□□ -0.66
PDZRN3-202ENST00000308537 CD164Q04900 197 aa10.9□□□□□ -0.66
PDZRN3-202ENST00000308537 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
PDZRN3-202ENST00000308537 A0A0G2JQZ4 141 aa10.88□□□□□ -0.67
PDZRN3-202ENST00000308537 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
PDZRN3-202ENST00000308537 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
PDZRN3-202ENST00000308537 HSD52Q0P140 79 aa10.87□□□□□ -0.67
PDZRN3-202ENST00000308537 Q5XG85 94 aa10.87□□□□□ -0.67
PDZRN3-202ENST00000308537 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
PDZRN3-202ENST00000308537 H0YGX0 51 aa10.86□□□□□ -0.67
PDZRN3-202ENST00000308537 F8WEM9 126 aa10.85□□□□□ -0.67
PDZRN3-202ENST00000308537 SEC61BP60468 96 aaKnown RBP10.85□□□□□ -0.67
PDZRN3-202ENST00000308537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-202ENST00000308537 Q6ZQY7 126 aa10.84□□□□□ -0.67
PDZRN3-202ENST00000308537 FXYD2P54710 66 aa10.82□□□□□ -0.68
PDZRN3-202ENST00000308537 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
PDZRN3-202ENST00000308537 GHRHP01286 108 aa10.8□□□□□ -0.68
PDZRN3-202ENST00000308537 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
PDZRN3-202ENST00000308537 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
PDZRN3-202ENST00000308537 A0A1B0GX51 115 aa10.76□□□□□ -0.69
PDZRN3-202ENST00000308537 SNHG12Q9BXW3 62 aa10.76□□□□□ -0.69
PDZRN3-202ENST00000308537 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
PDZRN3-202ENST00000308537 COX6CP09669 75 aa10.75□□□□□ -0.69
PDZRN3-202ENST00000308537 Q6JHZ5 121 aa10.75□□□□□ -0.69
PDZRN3-202ENST00000308537 KRTAP9-2Q9BYQ4 174 aa10.75□□□□□ -0.69
PDZRN3-202ENST00000308537 IGLV8-61A0A075B6I0 122 aa10.74□□□□□ -0.69
PDZRN3-202ENST00000308537 SMIM6P0DI80 62 aa10.74□□□□□ -0.69
PDZRN3-202ENST00000308537 KRTAP19-2Q3LHN2 52 aa10.74□□□□□ -0.69
PDZRN3-202ENST00000308537 PSMB2P49721 201 aa10.73□□□□□ -0.69
PDZRN3-202ENST00000308537 LCE2CQ5TA81 110 aa10.73□□□□□ -0.69
PDZRN3-202ENST00000308537 TRIAP1O43715 76 aa10.7□□□□□ -0.7
PDZRN3-202ENST00000308537 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
PDZRN3-202ENST00000308537 IGFL1Q6UW32 110 aa10.68□□□□□ -0.7
PDZRN3-202ENST00000308537 FAM218AQ96MZ4 157 aa10.68□□□□□ -0.7
PDZRN3-202ENST00000308537 H3BQ85 93 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 K7ERJ3 54 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 M0R143 59 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 TCL1BO95988 128 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 DNAL4O96015 105 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
PDZRN3-202ENST00000308537 TRBV7-7A0A0K0K1E9 115 aa10.63□□□□□ -0.71
PDZRN3-202ENST00000308537 TSTD3H0UI37 97 aa10.62□□□□□ -0.71
PDZRN3-202ENST00000308537 SCGB1C2P0DMR2 95 aa10.62□□□□□ -0.71
PDZRN3-202ENST00000308537 FABP2P12104 132 aa10.62□□□□□ -0.71
PDZRN3-202ENST00000308537 NDUFV3P56181 108 aaKnown RBP10.62□□□□□ -0.71
PDZRN3-202ENST00000308537 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
PDZRN3-202ENST00000308537 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-202ENST00000308537 H3BUT2 72 aa10.58□□□□□ -0.72
PDZRN3-202ENST00000308537 H3BMG7 143 aa10.57□□□□□ -0.72
PDZRN3-202ENST00000308537 TMEM256-PLSCR3K7ERE1 68 aa10.57□□□□□ -0.72
PDZRN3-202ENST00000308537 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
PDZRN3-202ENST00000308537 TRACP01848 142 aa10.53□□□□□ -0.72
PDZRN3-202ENST00000308537 MT1HP80294 61 aa10.53□□□□□ -0.72
PDZRN3-202ENST00000308537 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
PDZRN3-202ENST00000308537 Q6Q795 121 aa10.52□□□□□ -0.73
PDZRN3-202ENST00000308537 SS18L2Q9UHA2 77 aa10.52□□□□□ -0.73
PDZRN3-202ENST00000308537 LST1O00453 97 aa10.5□□□□□ -0.73
PDZRN3-202ENST00000308537 UBE2V1Q13404 147 aa10.48□□□□□ -0.73
PDZRN3-202ENST00000308537 FLGP20930 4061 aaPredicted RBP10.48□□□□□ -0.73
PDZRN3-202ENST00000308537 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
PDZRN3-202ENST00000308537 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
PDZRN3-202ENST00000308537 ATXN8Q156A1 80 aa10.44□□□□□ -0.74
PDZRN3-202ENST00000308537 BATFQ16520 125 aa10.43□□□□□ -0.74
PDZRN3-202ENST00000308537 Q96NJ1 140 aa10.43□□□□□ -0.74
PDZRN3-202ENST00000308537 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
PDZRN3-202ENST00000308537 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
PDZRN3-202ENST00000308537 A0A087WSZ3 146 aa10.41□□□□□ -0.74
PDZRN3-202ENST00000308537 BAALC-AS2P0C853 105 aa10.4□□□□□ -0.74
PDZRN3-202ENST00000308537 Q75L30 129 aa10.4□□□□□ -0.74
PDZRN3-202ENST00000308537 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
PDZRN3-202ENST00000308537 A0A1W2PNM2 257 aa10.39□□□□□ -0.75
PDZRN3-202ENST00000308537 RBM3P98179 157 aaKnown RBP10.39□□□□□ -0.75
PDZRN3-202ENST00000308537 A0A1B0GV72 72 aa10.38□□□□□ -0.75
PDZRN3-202ENST00000308537 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
PDZRN3-202ENST00000308537 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
PDZRN3-202ENST00000308537 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
PDZRN3-202ENST00000308537 KRTAP9-6A0A140TA67 174 aa10.36□□□□□ -0.75
PDZRN3-202ENST00000308537 CCKP06307 115 aa10.35□□□□□ -0.75
PDZRN3-202ENST00000308537 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
PDZRN3-202ENST00000308537 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
PDZRN3-202ENST00000308537 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
PDZRN3-202ENST00000308537 C9JAW5 83 aa10.31□□□□□ -0.76
PDZRN3-202ENST00000308537 JMJD7-PLA2G4BH0Y9G9 81 aa10.31□□□□□ -0.76
PDZRN3-202ENST00000308537 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
PDZRN3-202ENST00000308537 A8MUU9 505 aa10.3□□□□□ -0.76
PDZRN3-202ENST00000308537 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
PDZRN3-202ENST00000308537 C9orf118A6NHY6 69 aa10.29□□□□□ -0.76
PDZRN3-202ENST00000308537 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.77
PDZRN3-202ENST00000308537 PDE6GP18545 87 aa10.26□□□□□ -0.77
PDZRN3-202ENST00000308537 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
PDZRN3-202ENST00000308537 TAX1BP3O14907 124 aa10.24□□□□□ -0.77
PDZRN3-202ENST00000308537 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
PDZRN3-202ENST00000308537 DSCR10P59022 87 aa10.23□□□□□ -0.77
PDZRN3-202ENST00000308537 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
PDZRN3-202ENST00000308537 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
PDZRN3-202ENST00000308537 COX6B2Q6YFQ2 88 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms