RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.3□□□□□ -1.72
PTCD2-201ENST00000308077 DHRS4-AS1Q9P1J3 65 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
PTCD2-201ENST00000308077 A0A1B0GV72 72 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 VPS25Q9BRG1 176 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 BCE1O60756 84 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
PTCD2-201ENST00000308077 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
PTCD2-201ENST00000308077 CDK2AP2O75956 126 aa4.28□□□□□ -1.72
PTCD2-201ENST00000308077 ST20-AS1Q8NBB2 130 aa4.28□□□□□ -1.72
PTCD2-201ENST00000308077 H0Y9J4 135 aa4.27□□□□□ -1.73
PTCD2-201ENST00000308077 TMEM256-PLSCR3K7ERE1 68 aa4.27□□□□□ -1.73
PTCD2-201ENST00000308077 UBE2AP49459 152 aa4.27□□□□□ -1.73
PTCD2-201ENST00000308077 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
PTCD2-201ENST00000308077 HIGD2AQ9BW72 106 aa4.27□□□□□ -1.73
PTCD2-201ENST00000308077 HSPG2P98160 4391 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 C1orf137Q5JT78 98 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 Q8N377 158 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 IGLV5-48A0A075B6I7 105 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 C14orf132Q9NPU4 83 aa4.26□□□□□ -1.73
PTCD2-201ENST00000308077 J3QR89 54 aa4.25□□□□□ -1.73
PTCD2-201ENST00000308077 H3BQ85 93 aa4.24□□□□□ -1.73
PTCD2-201ENST00000308077 C3orf22Q8N5N4 141 aa4.24□□□□□ -1.73
PTCD2-201ENST00000308077 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
PTCD2-201ENST00000308077 XGP55808 180 aa4.24□□□□□ -1.73
PTCD2-201ENST00000308077 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
PTCD2-201ENST00000308077 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
PTCD2-201ENST00000308077 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
PTCD2-201ENST00000308077 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
PTCD2-201ENST00000308077 JMJD7-PLA2G4BH0Y9G9 81 aa4.23□□□□□ -1.73
PTCD2-201ENST00000308077 ZNF861PO60384 105 aa4.23□□□□□ -1.73
PTCD2-201ENST00000308077 IGLV7-43P04211 117 aa4.23□□□□□ -1.73
PTCD2-201ENST00000308077 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
PTCD2-201ENST00000308077 SPRR1BP22528 89 aa4.21□□□□□ -1.73
PTCD2-201ENST00000308077 RBM3P98179 157 aaKnown RBP4.21□□□□□ -1.73
PTCD2-201ENST00000308077 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.73
PTCD2-201ENST00000308077 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.74
PTCD2-201ENST00000308077 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
PTCD2-201ENST00000308077 TRBV7-4A0A0J9YYF1 115 aa4.2□□□□□ -1.74
PTCD2-201ENST00000308077 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
PTCD2-201ENST00000308077 SIGMAR1Q99720 223 aa4.2□□□□□ -1.74
PTCD2-201ENST00000308077 LOC110117498A0A087WWA1 95 aa4.2□□□□□ -1.74
PTCD2-201ENST00000308077 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
PTCD2-201ENST00000308077 Q6ZQT0 140 aa4.2□□□□□ -1.74
PTCD2-201ENST00000308077 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
PTCD2-201ENST00000308077 CCKP06307 115 aa4.19□□□□□ -1.74
PTCD2-201ENST00000308077 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
PTCD2-201ENST00000308077 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
PTCD2-201ENST00000308077 LINC00846Q9NV44 126 aa4.19□□□□□ -1.74
PTCD2-201ENST00000308077 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
PTCD2-201ENST00000308077 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
PTCD2-201ENST00000308077 RPL37AP61513 92 aaKnown RBP4.17□□□□□ -1.74
PTCD2-201ENST00000308077 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
PTCD2-201ENST00000308077 ZNF706Q9Y5V0 76 aaPredicted RBP4.17□□□□□ -1.74
PTCD2-201ENST00000308077 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
PTCD2-201ENST00000308077 IGLV8-61A0A075B6I0 122 aa4.17□□□□□ -1.74
PTCD2-201ENST00000308077 A0A0G2JQZ4 141 aa4.17□□□□□ -1.74
PTCD2-201ENST00000308077 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
PTCD2-201ENST00000308077 F8WEM9 126 aa4.16□□□□□ -1.74
PTCD2-201ENST00000308077 FAT1Q14517 4588 aa4.16□□□□□ -1.74
PTCD2-201ENST00000308077 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
PTCD2-201ENST00000308077 PDE6GP18545 87 aa4.16□□□□□ -1.74
PTCD2-201ENST00000308077 IGFL1Q6UW32 110 aa4.16□□□□□ -1.74
PTCD2-201ENST00000308077 ACYP1P07311 99 aa4.15□□□□□ -1.75
PTCD2-201ENST00000308077 IGLV9-49A0A0B4J1Y8 123 aa4.14□□□□□ -1.75
PTCD2-201ENST00000308077 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
PTCD2-201ENST00000308077 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
PTCD2-201ENST00000308077 PCP4P48539 62 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 Q8NBF4 154 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 IGKV3D-7A0A0C4DH55 119 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 MOBPQ13875 183 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 C9orf153Q5TBE3 101 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
PTCD2-201ENST00000308077 A0A087X002 238 aa4.12□□□□□ -1.75
PTCD2-201ENST00000308077 Q6JHZ5 121 aa4.12□□□□□ -1.75
PTCD2-201ENST00000308077 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
PTCD2-201ENST00000308077 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
PTCD2-201ENST00000308077 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
PTCD2-201ENST00000308077 TRBV7-7A0A0K0K1E9 115 aa4.11□□□□□ -1.75
PTCD2-201ENST00000308077 CRYGAP11844 174 aa4.1□□□□□ -1.75
PTCD2-201ENST00000308077 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
PTCD2-201ENST00000308077 FAM229BQ4G0N7 80 aa4.1□□□□□ -1.75
PTCD2-201ENST00000308077 Q6Q795 121 aa4.1□□□□□ -1.75
PTCD2-201ENST00000308077 Q6ZVQ6 151 aa4.1□□□□□ -1.75
PTCD2-201ENST00000308077 SCGB1A1P11684 91 aa4.09□□□□□ -1.75
PTCD2-201ENST00000308077 Q5VSD8 79 aa4.09□□□□□ -1.75
PTCD2-201ENST00000308077 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.76
PTCD2-201ENST00000308077 UBL5Q9BZL1 73 aa4.09□□□□□ -1.76
PTCD2-201ENST00000308077 A0A087WSZ3 146 aa4.08□□□□□ -1.76
PTCD2-201ENST00000308077 A0A087WVE0 104 aa4.08□□□□□ -1.76
PTCD2-201ENST00000308077 A0A1B0GW54 56 aa4.08□□□□□ -1.76
PTCD2-201ENST00000308077 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
PTCD2-201ENST00000308077 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
PTCD2-201ENST00000308077 SSBP3-AS1Q7Z2R9 100 aa4.07□□□□□ -1.76
PTCD2-201ENST00000308077 NREPQ16612 68 aa4.06□□□□□ -1.76
PTCD2-201ENST00000308077 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms