RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
DDX54-201ENST00000306014 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
DDX54-201ENST00000306014 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
DDX54-201ENST00000306014 TP53AIP1Q9HCN2 124 aa8.56□□□□□ -1.04
DDX54-201ENST00000306014 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
DDX54-201ENST00000306014 DCHS2Q6V1P9 2916 aa8.55□□□□□ -1.04
DDX54-201ENST00000306014 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
DDX54-201ENST00000306014 FBN2P35556 2912 aa8.54□□□□□ -1.04
DDX54-201ENST00000306014 NF1P21359 2839 aa8.54□□□□□ -1.04
DDX54-201ENST00000306014 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
DDX54-201ENST00000306014 Q5XG85 94 aa8.53□□□□□ -1.04
DDX54-201ENST00000306014 NBEAL1Q6ZS30 2694 aa8.52□□□□□ -1.05
DDX54-201ENST00000306014 BSNQ9UPA5 3926 aa8.52□□□□□ -1.05
DDX54-201ENST00000306014 OXTP01178 125 aa8.52□□□□□ -1.05
DDX54-201ENST00000306014 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
DDX54-201ENST00000306014 DSCR10P59022 87 aa8.5□□□□□ -1.05
DDX54-201ENST00000306014 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
DDX54-201ENST00000306014 COA5Q86WW8 74 aa8.47□□□□□ -1.05
DDX54-201ENST00000306014 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
DDX54-201ENST00000306014 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.06
DDX54-201ENST00000306014 SPINK1P00995 79 aa8.46□□□□□ -1.06
DDX54-201ENST00000306014 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
DDX54-201ENST00000306014 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
DDX54-201ENST00000306014 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
DDX54-201ENST00000306014 WIPF1O43516 503 aa8.44□□□□□ -1.06
DDX54-201ENST00000306014 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
DDX54-201ENST00000306014 RTL8CO15255 209 aa8.44□□□□□ -1.06
DDX54-201ENST00000306014 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
DDX54-201ENST00000306014 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
DDX54-201ENST00000306014 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
DDX54-201ENST00000306014 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
DDX54-201ENST00000306014 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
DDX54-201ENST00000306014 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
DDX54-201ENST00000306014 ACYP2P14621 99 aa8.41□□□□□ -1.06
DDX54-201ENST00000306014 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
DDX54-201ENST00000306014 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
DDX54-201ENST00000306014 MXRA5Q9NR99 2828 aa8.4□□□□□ -1.06
DDX54-201ENST00000306014 KMT2BQ9UMN6 2715 aaPredicted RBP8.39□□□□□ -1.07
DDX54-201ENST00000306014 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
DDX54-201ENST00000306014 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
DDX54-201ENST00000306014 A0A1B0GU69 56 aa8.38□□□□□ -1.07
DDX54-201ENST00000306014 SPRR1AP35321 89 aa8.38□□□□□ -1.07
DDX54-201ENST00000306014 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
DDX54-201ENST00000306014 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
DDX54-201ENST00000306014 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
DDX54-201ENST00000306014 LINC00313P59037 77 aa8.35□□□□□ -1.07
DDX54-201ENST00000306014 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.08
DDX54-201ENST00000306014 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
DDX54-201ENST00000306014 K7ERS5 55 aa8.33□□□□□ -1.08
DDX54-201ENST00000306014 C7orf65Q6ZTY9 151 aa8.32□□□□□ -1.08
DDX54-201ENST00000306014 Q1T7F1 81 aa8.32□□□□□ -1.08
DDX54-201ENST00000306014 ZNF861PO60384 105 aa8.31□□□□□ -1.08
DDX54-201ENST00000306014 TENM4Q6N022 2769 aa8.3□□□□□ -1.08
DDX54-201ENST00000306014 APLNQ9ULZ1 77 aa8.3□□□□□ -1.08
DDX54-201ENST00000306014 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
DDX54-201ENST00000306014 A0A087WTM6 91 aa8.29□□□□□ -1.08
DDX54-201ENST00000306014 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
DDX54-201ENST00000306014 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
DDX54-201ENST00000306014 TNP2Q05952 138 aa8.26□□□□□ -1.09
DDX54-201ENST00000306014 ATP11AUNQ6ZP68 121 aa8.25□□□□□ -1.09
DDX54-201ENST00000306014 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
DDX54-201ENST00000306014 KRTAP4-16G5E9R7 235 aaPredicted RBP8.24□□□□□ -1.09
DDX54-201ENST00000306014 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
DDX54-201ENST00000306014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.22□□□□□ -1.09
DDX54-201ENST00000306014 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.09
DDX54-201ENST00000306014 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
DDX54-201ENST00000306014 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
DDX54-201ENST00000306014 SSBP3-AS1Q7Z2R9 100 aa8.2□□□□□ -1.1
DDX54-201ENST00000306014 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
DDX54-201ENST00000306014 Q96NJ1 140 aa8.2□□□□□ -1.1
DDX54-201ENST00000306014 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
DDX54-201ENST00000306014 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
DDX54-201ENST00000306014 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
DDX54-201ENST00000306014 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
DDX54-201ENST00000306014 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
DDX54-201ENST00000306014 CUBNO60494 3623 aa8.17□□□□□ -1.1
DDX54-201ENST00000306014 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
DDX54-201ENST00000306014 SPRR1BP22528 89 aa8.15□□□□□ -1.1
DDX54-201ENST00000306014 CD164Q04900 197 aa8.15□□□□□ -1.11
DDX54-201ENST00000306014 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
DDX54-201ENST00000306014 UQCR11O14957 56 aa8.14□□□□□ -1.11
DDX54-201ENST00000306014 Q5VV11 94 aa8.13□□□□□ -1.11
DDX54-201ENST00000306014 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
DDX54-201ENST00000306014 VPS13CQ709C8 3753 aa8.12□□□□□ -1.11
DDX54-201ENST00000306014 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
DDX54-201ENST00000306014 PDZD2O15018 2839 aa8.11□□□□□ -1.11
DDX54-201ENST00000306014 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
DDX54-201ENST00000306014 KRTAP7-1Q8IUC3 87 aa8.1□□□□□ -1.11
DDX54-201ENST00000306014 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
DDX54-201ENST00000306014 Q75L30 129 aa8.09□□□□□ -1.11
DDX54-201ENST00000306014 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
DDX54-201ENST00000306014 HRES1P13985 223 aa8.06□□□□□ -1.12
DDX54-201ENST00000306014 PANO1I0J062 215 aa8.05□□□□□ -1.12
DDX54-201ENST00000306014 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
DDX54-201ENST00000306014 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
DDX54-201ENST00000306014 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
DDX54-201ENST00000306014 Q8N1X5 172 aa8.01□□□□□ -1.13
DDX54-201ENST00000306014 LCE6AA0A183 80 aa7.99□□□□□ -1.13
DDX54-201ENST00000306014 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
DDX54-201ENST00000306014 LCA10Q71F78 164 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms