RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TRBV20-1A0A075B6N2 111 aa16.04■□□□□ 0.16
HDAC3-201ENST00000305264 OCIAD2Q56VL3 154 aa16.03■□□□□ 0.16
HDAC3-201ENST00000305264 SMIM29Q86T20 159 aa16.03■□□□□ 0.16
HDAC3-201ENST00000305264 OXTP01178 125 aa16.02■□□□□ 0.16
HDAC3-201ENST00000305264 ORMDL1Q9P0S3 153 aa16.01■□□□□ 0.15
HDAC3-201ENST00000305264 IGLV9-49A0A0B4J1Y8 123 aa16■□□□□ 0.15
HDAC3-201ENST00000305264 SPCS1Q9Y6A9 102 aa16■□□□□ 0.15
HDAC3-201ENST00000305264 KRTAP29-1A8MX34 341 aaPredicted RBP15.99■□□□□ 0.15
HDAC3-201ENST00000305264 PPDPFLQ8WWR9 84 aa15.98■□□□□ 0.15
HDAC3-201ENST00000305264 LAMTOR3Q9UHA4 124 aa15.98■□□□□ 0.15
HDAC3-201ENST00000305264 MT1HL1P0DM35 61 aa15.97■□□□□ 0.15
HDAC3-201ENST00000305264 KRTAP10-8P60410 259 aa15.96■□□□□ 0.15
HDAC3-201ENST00000305264 H3BMG7 143 aa15.95■□□□□ 0.14
HDAC3-201ENST00000305264 MOBPQ13875 183 aa15.95■□□□□ 0.14
HDAC3-201ENST00000305264 TYMSOSQ8TAI1 123 aa15.95■□□□□ 0.14
HDAC3-201ENST00000305264 C9orf153Q5TBE3 101 aa15.93■□□□□ 0.14
HDAC3-201ENST00000305264 GHRHP01286 108 aa15.93■□□□□ 0.14
HDAC3-201ENST00000305264 C9JAW5 83 aa15.91■□□□□ 0.14
HDAC3-201ENST00000305264 K7EP34 96 aa15.91■□□□□ 0.14
HDAC3-201ENST00000305264 TMEM256-PLSCR3K7ERE1 68 aa15.89■□□□□ 0.13
HDAC3-201ENST00000305264 BAALC-AS2P0C853 105 aa15.89■□□□□ 0.13
HDAC3-201ENST00000305264 MTURNQ8N3F0 131 aa15.89■□□□□ 0.13
HDAC3-201ENST00000305264 Q8NBF4 154 aa15.89■□□□□ 0.13
HDAC3-201ENST00000305264 H3BQ85 93 aa15.87■□□□□ 0.13
HDAC3-201ENST00000305264 NDUFV3P56181 108 aaKnown RBP15.87■□□□□ 0.13
HDAC3-201ENST00000305264 F8WEM9 126 aa15.87■□□□□ 0.13
HDAC3-201ENST00000305264 J3QL48 77 aa15.84■□□□□ 0.13
HDAC3-201ENST00000305264 DMBT1Q9UGM3 2413 aaPredicted RBP15.83■□□□□ 0.13
HDAC3-201ENST00000305264 UBE2V1Q13404 147 aa15.82■□□□□ 0.12
HDAC3-201ENST00000305264 SSBP3-AS1Q7Z2R9 100 aa15.82■□□□□ 0.12
HDAC3-201ENST00000305264 A0A1B0GV72 72 aa15.82■□□□□ 0.12
HDAC3-201ENST00000305264 A0A0G2JQZ4 141 aa15.8■□□□□ 0.12
HDAC3-201ENST00000305264 GTF2H5Q6ZYL4 71 aa15.8■□□□□ 0.12
HDAC3-201ENST00000305264 IGLV8-61A0A075B6I0 122 aa15.8■□□□□ 0.12
HDAC3-201ENST00000305264 ANKRD29Q8N6D5 301 aa15.8■□□□□ 0.12
HDAC3-201ENST00000305264 LINC00304Q8N9R0 145 aa15.77■□□□□ 0.12
HDAC3-201ENST00000305264 H3BT86 120 aa15.76■□□□□ 0.11
HDAC3-201ENST00000305264 A0A1B0GV90 55 aa15.75■□□□□ 0.11
HDAC3-201ENST00000305264 IGFL1Q6UW32 110 aa15.74■□□□□ 0.11
HDAC3-201ENST00000305264 PRO0461Q9UI25 63 aa15.74■□□□□ 0.11
HDAC3-201ENST00000305264 SMCPP49901 116 aaPredicted RBP15.73■□□□□ 0.11
HDAC3-201ENST00000305264 Q6JHZ5 121 aa15.72■□□□□ 0.11
HDAC3-201ENST00000305264 HRCT1Q6UXD1 115 aa15.68■□□□□ 0.1
HDAC3-201ENST00000305264 RBM3P98179 157 aaKnown RBP15.66■□□□□ 0.1
HDAC3-201ENST00000305264 C4orf48Q5BLP8 95 aa15.66■□□□□ 0.1
HDAC3-201ENST00000305264 SPAG11AQ6PDA7 123 aa15.64■□□□□ 0.09
HDAC3-201ENST00000305264 JMJD7-PLA2G4BH0Y9G9 81 aa15.62■□□□□ 0.09
HDAC3-201ENST00000305264 TRBV7-4A0A0J9YYF1 115 aa15.62■□□□□ 0.09
HDAC3-201ENST00000305264 OBSCN-AS1Q96MR7 158 aa15.61■□□□□ 0.09
HDAC3-201ENST00000305264 SPINK1P00995 79 aa15.6■□□□□ 0.09
HDAC3-201ENST00000305264 CD164Q04900 197 aa15.6■□□□□ 0.09
HDAC3-201ENST00000305264 HERC1Q15751 4861 aa15.6■□□□□ 0.09
HDAC3-201ENST00000305264 F8W1H4 67 aa15.59■□□□□ 0.09
HDAC3-201ENST00000305264 DSCR8Q96T75 97 aa15.59■□□□□ 0.09
HDAC3-201ENST00000305264 C14orf132Q9NPU4 83 aa15.58■□□□□ 0.08
HDAC3-201ENST00000305264 A0A1W2PNM2 257 aa15.56■□□□□ 0.08
HDAC3-201ENST00000305264 CCKP06307 115 aa15.53■□□□□ 0.08
HDAC3-201ENST00000305264 Q6Q795 121 aa15.53■□□□□ 0.08
HDAC3-201ENST00000305264 TEN1Q86WV5 123 aa15.53■□□□□ 0.08
HDAC3-201ENST00000305264 TRBV7-7A0A0K0K1E9 115 aa15.52■□□□□ 0.07
HDAC3-201ENST00000305264 RPS29P62273 56 aaKnown RBP15.52■□□□□ 0.07
HDAC3-201ENST00000305264 LOC110117498A0A087WWA1 95 aa15.51■□□□□ 0.07
HDAC3-201ENST00000305264 Q6ZQT0 140 aa15.5■□□□□ 0.07
HDAC3-201ENST00000305264 VPS25Q9BRG1 176 aa15.49■□□□□ 0.07
HDAC3-201ENST00000305264 ETDBQ3ZM63 59 aa15.47■□□□□ 0.07
HDAC3-201ENST00000305264 LIMD2Q9BT23 127 aa15.46■□□□□ 0.07
HDAC3-201ENST00000305264 RETNLBQ9BQ08 111 aa15.44■□□□□ 0.06
HDAC3-201ENST00000305264 A0A087WSZ3 146 aa15.44■□□□□ 0.06
HDAC3-201ENST00000305264 PDE6GP18545 87 aa15.44■□□□□ 0.06
HDAC3-201ENST00000305264 Q5XG85 94 aa15.42■□□□□ 0.06
HDAC3-201ENST00000305264 SS18L2Q9UHA2 77 aa15.33■□□□□ 0.05
HDAC3-201ENST00000305264 ASB16-AS1Q495Z4 193 aa15.31■□□□□ 0.04
HDAC3-201ENST00000305264 C21orf62-AS1Q17RA5 79 aa15.3■□□□□ 0.04
HDAC3-201ENST00000305264 C1orf195Q5TG92 126 aa15.3■□□□□ 0.04
HDAC3-201ENST00000305264 PRR4Q16378 134 aa15.27■□□□□ 0.03
HDAC3-201ENST00000305264 HMCN2Q8NDA2 5059 aa15.26■□□□□ 0.03
HDAC3-201ENST00000305264 A0A1B0GW54 56 aa15.25■□□□□ 0.03
HDAC3-201ENST00000305264 Q96NJ1 140 aa15.23■□□□□ 0.03
HDAC3-201ENST00000305264 FP248Q71RG6 208 aaPredicted RBP15.2■□□□□ 0.02
HDAC3-201ENST00000305264 IGLV7-46A0A075B6I9 117 aa15.16■□□□□ 0.02
HDAC3-201ENST00000305264 LINC00472Q9H8W2 130 aa15.16■□□□□ 0.02
HDAC3-201ENST00000305264 DEFB116Q30KQ4 102 aa15.15■□□□□ 0.02
HDAC3-201ENST00000305264 LINC00846Q9NV44 126 aa15.11■□□□□ 0.01
HDAC3-201ENST00000305264 LPAP08519 4548 aa15.11■□□□□ 0.01
HDAC3-201ENST00000305264 NREPQ16612 68 aa15.1■□□□□ 0.01
HDAC3-201ENST00000305264 IGKV4-1P06312 121 aa15.07■□□□□ 0
HDAC3-201ENST00000305264 SIGMAR1Q99720 223 aa15.07■□□□□ 0
HDAC3-201ENST00000305264 Q6ZVQ6 151 aa15.05■□□□□ 0
HDAC3-201ENST00000305264 KRTAP13-3Q3SY46 172 aa15.02□□□□□ -0.01
HDAC3-201ENST00000305264 TPRXLQ17RH7 258 aa15.01□□□□□ -0.01
HDAC3-201ENST00000305264 FAM240AA0A1B0GVK7 77 aa15□□□□□ -0.01
HDAC3-201ENST00000305264 UBL5Q9BZL1 73 aa15□□□□□ -0.01
HDAC3-201ENST00000305264 LRP2P98164 4655 aa15□□□□□ -0.01
HDAC3-201ENST00000305264 J3KT08 172 aa14.98□□□□□ -0.01
HDAC3-201ENST00000305264 ACYP1P07311 99 aa14.97□□□□□ -0.01
HDAC3-201ENST00000305264 C9orf92A6NGG3 77 aa14.96□□□□□ -0.01
HDAC3-201ENST00000305264 BPY2O14599 106 aa14.91□□□□□ -0.02
HDAC3-201ENST00000305264 J3QR89 54 aa14.9□□□□□ -0.02
HDAC3-201ENST00000305264 DSCR10P59022 87 aa14.89□□□□□ -0.03
HDAC3-201ENST00000305264 A8MWP4 228 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms