RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
ZNF558-201ENST00000301475 UBE2BP63146 152 aa6.91□□□□□ -1.3
ZNF558-201ENST00000301475 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
ZNF558-201ENST00000301475 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
ZNF558-201ENST00000301475 LINC01556Q5JQF7 62 aa6.9□□□□□ -1.3
ZNF558-201ENST00000301475 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
ZNF558-201ENST00000301475 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
ZNF558-201ENST00000301475 H3BNG1 76 aa6.9□□□□□ -1.3
ZNF558-201ENST00000301475 MP68P56378 58 aa6.9□□□□□ -1.31
ZNF558-201ENST00000301475 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.31
ZNF558-201ENST00000301475 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
ZNF558-201ENST00000301475 A0A087WSZ3 146 aa6.88□□□□□ -1.31
ZNF558-201ENST00000301475 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
ZNF558-201ENST00000301475 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
ZNF558-201ENST00000301475 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
ZNF558-201ENST00000301475 H0Y9P7 68 aa6.86□□□□□ -1.31
ZNF558-201ENST00000301475 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
ZNF558-201ENST00000301475 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
ZNF558-201ENST00000301475 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
ZNF558-201ENST00000301475 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
ZNF558-201ENST00000301475 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
ZNF558-201ENST00000301475 DNAH10Q8IVF4 4471 aa6.84□□□□□ -1.31
ZNF558-201ENST00000301475 PRLHP81277 87 aa6.83□□□□□ -1.32
ZNF558-201ENST00000301475 UBE2AP49459 152 aa6.83□□□□□ -1.32
ZNF558-201ENST00000301475 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
ZNF558-201ENST00000301475 CASC2Q6XLA1 102 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 CD164Q04900 197 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
ZNF558-201ENST00000301475 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
ZNF558-201ENST00000301475 STAB2Q8WWQ8 2551 aa6.81□□□□□ -1.32
ZNF558-201ENST00000301475 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
ZNF558-201ENST00000301475 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
ZNF558-201ENST00000301475 LCA10Q71F78 164 aa6.81□□□□□ -1.32
ZNF558-201ENST00000301475 DEFB131BA0A096LNP1 70 aa6.8□□□□□ -1.32
ZNF558-201ENST00000301475 H3BPC8 53 aa6.79□□□□□ -1.32
ZNF558-201ENST00000301475 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
ZNF558-201ENST00000301475 KTN1-AS1Q86SY8 53 aa6.78□□□□□ -1.32
ZNF558-201ENST00000301475 COA5Q86WW8 74 aa6.78□□□□□ -1.32
ZNF558-201ENST00000301475 TENM2Q9NT68 2774 aa6.77□□□□□ -1.33
ZNF558-201ENST00000301475 Q75L30 129 aa6.77□□□□□ -1.33
ZNF558-201ENST00000301475 A8MWP4 228 aa6.76□□□□□ -1.33
ZNF558-201ENST00000301475 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
ZNF558-201ENST00000301475 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
ZNF558-201ENST00000301475 A6NED7 52 aa6.75□□□□□ -1.33
ZNF558-201ENST00000301475 LYSTQ99698 3801 aa6.74□□□□□ -1.33
ZNF558-201ENST00000301475 A0A096LNI7 61 aa6.74□□□□□ -1.33
ZNF558-201ENST00000301475 IGKV2-24A0A0C4DH68 120 aa6.74□□□□□ -1.33
ZNF558-201ENST00000301475 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
ZNF558-201ENST00000301475 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
ZNF558-201ENST00000301475 IGLV7-46A0A075B6I9 117 aa6.73□□□□□ -1.33
ZNF558-201ENST00000301475 ATP11AUNQ6ZP68 121 aa6.73□□□□□ -1.33
ZNF558-201ENST00000301475 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
ZNF558-201ENST00000301475 A6NN06 94 aa6.73□□□□□ -1.33
ZNF558-201ENST00000301475 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
ZNF558-201ENST00000301475 COL7A1Q02388 2944 aa6.72□□□□□ -1.33
ZNF558-201ENST00000301475 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
ZNF558-201ENST00000301475 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
ZNF558-201ENST00000301475 MDFIQ99750 246 aa6.71□□□□□ -1.33
ZNF558-201ENST00000301475 H0Y9J4 135 aa6.71□□□□□ -1.34
ZNF558-201ENST00000301475 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
ZNF558-201ENST00000301475 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
ZNF558-201ENST00000301475 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
ZNF558-201ENST00000301475 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
ZNF558-201ENST00000301475 DNHD1Q96M86 4753 aa6.68□□□□□ -1.34
ZNF558-201ENST00000301475 SPRR1BP22528 89 aa6.68□□□□□ -1.34
ZNF558-201ENST00000301475 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
ZNF558-201ENST00000301475 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
ZNF558-201ENST00000301475 MOBPQ13875 183 aa6.66□□□□□ -1.34
ZNF558-201ENST00000301475 CHTF8P0CG12 524 aa6.65□□□□□ -1.34
ZNF558-201ENST00000301475 HUWE1Q7Z6Z7 4374 aaKnown RBP6.65□□□□□ -1.34
ZNF558-201ENST00000301475 NDUFS5O43920 106 aa6.65□□□□□ -1.35
ZNF558-201ENST00000301475 SPINK7P58062 85 aa6.65□□□□□ -1.35
ZNF558-201ENST00000301475 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
ZNF558-201ENST00000301475 Q96NJ1 140 aa6.64□□□□□ -1.35
ZNF558-201ENST00000301475 K7EIL1 84 aa6.63□□□□□ -1.35
ZNF558-201ENST00000301475 KRTAP1-5Q9BYS1 174 aa6.63□□□□□ -1.35
ZNF558-201ENST00000301475 HRES1P13985 223 aa6.62□□□□□ -1.35
ZNF558-201ENST00000301475 Q6ZR54 194 aa6.62□□□□□ -1.35
ZNF558-201ENST00000301475 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
ZNF558-201ENST00000301475 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
ZNF558-201ENST00000301475 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
ZNF558-201ENST00000301475 TGP01266 2768 aa6.59□□□□□ -1.35
ZNF558-201ENST00000301475 MEGF8Q7Z7M0 2845 aa6.58□□□□□ -1.36
ZNF558-201ENST00000301475 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
ZNF558-201ENST00000301475 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
ZNF558-201ENST00000301475 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
ZNF558-201ENST00000301475 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
ZNF558-201ENST00000301475 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
ZNF558-201ENST00000301475 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
ZNF558-201ENST00000301475 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
ZNF558-201ENST00000301475 A0A087X002 238 aa6.54□□□□□ -1.36
ZNF558-201ENST00000301475 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
ZNF558-201ENST00000301475 PRR26Q8N8Z3 221 aa6.54□□□□□ -1.36
ZNF558-201ENST00000301475 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
ZNF558-201ENST00000301475 PANO1I0J062 215 aa6.53□□□□□ -1.36
ZNF558-201ENST00000301475 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms