RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 LCE6AA0A183 80 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 SPINK7P58062 85 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 NDUFB1O75438 58 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 KRTAP10-3P60369 221 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
CDT1-201ENST00000301019 LELP1Q5T871 98 aa9.23□□□□□ -0.93
CDT1-201ENST00000301019 EGFEM1PQ0D2K5 195 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 MOBPQ13875 183 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 PRLHP81277 87 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 A6NN06 94 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 H0Y9J4 135 aa9.22□□□□□ -0.93
CDT1-201ENST00000301019 CASC2Q6XLA1 102 aa9.21□□□□□ -0.94
CDT1-201ENST00000301019 Q6ZRX8 168 aa9.2□□□□□ -0.94
CDT1-201ENST00000301019 PRR34Q9NV39 138 aa9.2□□□□□ -0.94
CDT1-201ENST00000301019 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
CDT1-201ENST00000301019 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
CDT1-201ENST00000301019 MDFIQ99750 246 aa9.19□□□□□ -0.94
CDT1-201ENST00000301019 H3BS24 57 aa9.18□□□□□ -0.94
CDT1-201ENST00000301019 C8orf87E5RJ46 101 aa9.18□□□□□ -0.94
CDT1-201ENST00000301019 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
CDT1-201ENST00000301019 CMC4P56277 68 aaPredicted RBP9.16□□□□□ -0.94
CDT1-201ENST00000301019 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
CDT1-201ENST00000301019 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
CDT1-201ENST00000301019 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
CDT1-201ENST00000301019 NDUFS5O43920 106 aa9.16□□□□□ -0.94
CDT1-201ENST00000301019 LOC101927531A0A1B0GV80 90 aa9.15□□□□□ -0.94
CDT1-201ENST00000301019 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
CDT1-201ENST00000301019 DHRS4-AS1Q9P1J3 65 aa9.13□□□□□ -0.95
CDT1-201ENST00000301019 LINC00313P59037 77 aa9.13□□□□□ -0.95
CDT1-201ENST00000301019 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
CDT1-201ENST00000301019 TNP2Q05952 138 aa9.12□□□□□ -0.95
CDT1-201ENST00000301019 Q75L30 129 aa9.12□□□□□ -0.95
CDT1-201ENST00000301019 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
CDT1-201ENST00000301019 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
CDT1-201ENST00000301019 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
CDT1-201ENST00000301019 PRR26Q8N8Z3 221 aa9.1□□□□□ -0.95
CDT1-201ENST00000301019 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.96
CDT1-201ENST00000301019 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
CDT1-201ENST00000301019 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
CDT1-201ENST00000301019 Q8NAQ8 132 aa9.07□□□□□ -0.96
CDT1-201ENST00000301019 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
CDT1-201ENST00000301019 J3QL48 77 aa9.06□□□□□ -0.96
CDT1-201ENST00000301019 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
CDT1-201ENST00000301019 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
CDT1-201ENST00000301019 KRTAP29-1A8MX34 341 aaPredicted RBP9.02□□□□□ -0.97
CDT1-201ENST00000301019 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
CDT1-201ENST00000301019 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
CDT1-201ENST00000301019 REG3GQ6UW15 175 aa9□□□□□ -0.97
CDT1-201ENST00000301019 SPANXA2-OT1Q8N9U9 137 aa9□□□□□ -0.97
CDT1-201ENST00000301019 STAB1Q9NY15 2570 aa8.99□□□□□ -0.97
CDT1-201ENST00000301019 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
CDT1-201ENST00000301019 K7EIL1 84 aa8.99□□□□□ -0.97
CDT1-201ENST00000301019 HRES1P13985 223 aa8.97□□□□□ -0.97
CDT1-201ENST00000301019 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.98
CDT1-201ENST00000301019 IGHV6-1A0A0B4J1U7 121 aa8.95□□□□□ -0.98
CDT1-201ENST00000301019 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
CDT1-201ENST00000301019 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
CDT1-201ENST00000301019 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
CDT1-201ENST00000301019 A8MWP4 228 aa8.93□□□□□ -0.98
CDT1-201ENST00000301019 LYSTQ99698 3801 aa8.93□□□□□ -0.98
CDT1-201ENST00000301019 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
CDT1-201ENST00000301019 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
CDT1-201ENST00000301019 A0A1B0GW54 56 aa8.91□□□□□ -0.98
CDT1-201ENST00000301019 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
CDT1-201ENST00000301019 SPRR1AP35321 89 aa8.91□□□□□ -0.98
CDT1-201ENST00000301019 DNAH10Q8IVF4 4471 aa8.91□□□□□ -0.98
CDT1-201ENST00000301019 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
CDT1-201ENST00000301019 ANK2Q01484 3957 aa8.9□□□□□ -0.99
CDT1-201ENST00000301019 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.99
CDT1-201ENST00000301019 KRTAP11-1Q8IUC1 163 aa8.88□□□□□ -0.99
CDT1-201ENST00000301019 SPINK6Q6UWN8 80 aa8.87□□□□□ -0.99
CDT1-201ENST00000301019 DEFB131BA0A096LNP1 70 aa8.86□□□□□ -0.99
CDT1-201ENST00000301019 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
CDT1-201ENST00000301019 A0A087X002 238 aa8.86□□□□□ -0.99
CDT1-201ENST00000301019 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
CDT1-201ENST00000301019 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
CDT1-201ENST00000301019 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
CDT1-201ENST00000301019 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
CDT1-201ENST00000301019 H3BPC8 53 aa8.84□□□□□ -0.99
CDT1-201ENST00000301019 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
CDT1-201ENST00000301019 STAB2Q8WWQ8 2551 aa8.8□□□□□ -1
CDT1-201ENST00000301019 LINC01556Q5JQF7 62 aa8.8□□□□□ -1
CDT1-201ENST00000301019 CMYA5Q8N3K9 4069 aa8.78□□□□□ -1
CDT1-201ENST00000301019 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
CDT1-201ENST00000301019 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
CDT1-201ENST00000301019 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
CDT1-201ENST00000301019 A0A1B0GU69 56 aa8.75□□□□□ -1.01
CDT1-201ENST00000301019 Q5W150 140 aa8.73□□□□□ -1.01
CDT1-201ENST00000301019 Q6ZR54 194 aa8.73□□□□□ -1.01
CDT1-201ENST00000301019 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
CDT1-201ENST00000301019 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
CDT1-201ENST00000301019 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
CDT1-201ENST00000301019 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
CDT1-201ENST00000301019 SPINK1P00995 79 aa8.69□□□□□ -1.02
CDT1-201ENST00000301019 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
CDT1-201ENST00000301019 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
CDT1-201ENST00000301019 RTL8CO15255 209 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 452.5 ms