RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 FAM30AQ9NZY2 134 aa13.97□□□□□ -0.17
VSTM4-201ENST00000298454 PKD1P98161 4303 aa13.97□□□□□ -0.17
VSTM4-201ENST00000298454 SACSQ9NZJ4 4579 aa13.97□□□□□ -0.17
VSTM4-201ENST00000298454 F8WEM9 126 aa13.96□□□□□ -0.17
VSTM4-201ENST00000298454 FAM236AA0A1B0GUQ0 79 aa13.95□□□□□ -0.18
VSTM4-201ENST00000298454 FAM236BA0A1B0GV22 79 aa13.95□□□□□ -0.18
VSTM4-201ENST00000298454 ATP5EP2Q5VTU8 51 aa13.95□□□□□ -0.18
VSTM4-201ENST00000298454 A0A0G2JQZ4 141 aa13.94□□□□□ -0.18
VSTM4-201ENST00000298454 HAMPP81172 84 aa13.94□□□□□ -0.18
VSTM4-201ENST00000298454 SPRR1BP22528 89 aa13.93□□□□□ -0.18
VSTM4-201ENST00000298454 A0A087WVE0 104 aa13.93□□□□□ -0.18
VSTM4-201ENST00000298454 Q8NBF4 154 aa13.92□□□□□ -0.18
VSTM4-201ENST00000298454 ANAPC13Q9BS18 74 aa13.92□□□□□ -0.18
VSTM4-201ENST00000298454 HIST1H4AP62805 103 aaKnown RBP13.9□□□□□ -0.18
VSTM4-201ENST00000298454 IGFL1Q6UW32 110 aa13.9□□□□□ -0.18
VSTM4-201ENST00000298454 CIRBP-AS1Q8TBR5 109 aa13.9□□□□□ -0.18
VSTM4-201ENST00000298454 KRTAP10-1P60331 282 aa13.89□□□□□ -0.19
VSTM4-201ENST00000298454 IGLV8-61A0A075B6I0 122 aa13.88□□□□□ -0.19
VSTM4-201ENST00000298454 SPRR4Q96PI1 79 aa13.86□□□□□ -0.19
VSTM4-201ENST00000298454 NREPQ16612 68 aa13.86□□□□□ -0.19
VSTM4-201ENST00000298454 SCXQ7RTU7 201 aa13.86□□□□□ -0.19
VSTM4-201ENST00000298454 Q6ZSA8 131 aa13.84□□□□□ -0.19
VSTM4-201ENST00000298454 LCE6AA0A183 80 aa13.83□□□□□ -0.19
VSTM4-201ENST00000298454 A0A1B0GW54 56 aa13.83□□□□□ -0.19
VSTM4-201ENST00000298454 ZNF861PO60384 105 aa13.83□□□□□ -0.19
VSTM4-201ENST00000298454 CXCL6P80162 114 aa13.83□□□□□ -0.19
VSTM4-201ENST00000298454 SVIPQ8NHG7 77 aa13.83□□□□□ -0.19
VSTM4-201ENST00000298454 CRYGAP11844 174 aa13.82□□□□□ -0.2
VSTM4-201ENST00000298454 IGLV7-43P04211 117 aa13.78□□□□□ -0.2
VSTM4-201ENST00000298454 LINC00483Q53H64 154 aa13.77□□□□□ -0.21
VSTM4-201ENST00000298454 ZNF706Q9Y5V0 76 aaPredicted RBP13.75□□□□□ -0.21
VSTM4-201ENST00000298454 LRP1BQ9NZR2 4599 aa13.74□□□□□ -0.21
VSTM4-201ENST00000298454 IGLV9-49A0A0B4J1Y8 123 aa13.73□□□□□ -0.21
VSTM4-201ENST00000298454 BPY2O14599 106 aa13.73□□□□□ -0.21
VSTM4-201ENST00000298454 ANAPC11Q9NYG5 84 aa13.73□□□□□ -0.21
VSTM4-201ENST00000298454 Q8N9L7 120 aa13.72□□□□□ -0.21
VSTM4-201ENST00000298454 A0A087WSZ3 146 aa13.72□□□□□ -0.21
VSTM4-201ENST00000298454 C9orf153Q5TBE3 101 aa13.7□□□□□ -0.22
VSTM4-201ENST00000298454 ATOX1O00244 68 aa13.69□□□□□ -0.22
VSTM4-201ENST00000298454 PKHD1P08F94 4074 aa13.68□□□□□ -0.22
VSTM4-201ENST00000298454 CCDC179H3BU77 68 aa13.67□□□□□ -0.22
VSTM4-201ENST00000298454 LINC00336Q6ZUF6 198 aa13.67□□□□□ -0.22
VSTM4-201ENST00000298454 IGKV4-1P06312 121 aa13.65□□□□□ -0.22
VSTM4-201ENST00000298454 RYR2Q92736 4967 aa13.65□□□□□ -0.22
VSTM4-201ENST00000298454 MOBPQ13875 183 aa13.62□□□□□ -0.23
VSTM4-201ENST00000298454 KMT2CQ8NEZ4 4911 aaKnown RBP13.62□□□□□ -0.23
VSTM4-201ENST00000298454 DEFB116Q30KQ4 102 aa13.61□□□□□ -0.23
VSTM4-201ENST00000298454 DSCR10P59022 87 aa13.61□□□□□ -0.23
VSTM4-201ENST00000298454 A0A1B0GVY2 172 aa13.59□□□□□ -0.23
VSTM4-201ENST00000298454 RPL37AP61513 92 aaKnown RBP13.57□□□□□ -0.24
VSTM4-201ENST00000298454 HRCT1Q6UXD1 115 aa13.56□□□□□ -0.24
VSTM4-201ENST00000298454 COX7CP15954 63 aa13.55□□□□□ -0.24
VSTM4-201ENST00000298454 DYNC1H1Q14204 4646 aaKnown RBP13.55□□□□□ -0.24
VSTM4-201ENST00000298454 K7EQZ3 153 aa13.54□□□□□ -0.24
VSTM4-201ENST00000298454 SERP2Q8N6R1 65 aa13.54□□□□□ -0.24
VSTM4-201ENST00000298454 VPS13BQ7Z7G8 4022 aa13.53□□□□□ -0.24
VSTM4-201ENST00000298454 UQCRQO14949 82 aa13.52□□□□□ -0.24
VSTM4-201ENST00000298454 LINC00472Q9H8W2 130 aa13.5□□□□□ -0.25
VSTM4-201ENST00000298454 A0A087X002 238 aa13.44□□□□□ -0.26
VSTM4-201ENST00000298454 TRAV7A0A075B6U4 112 aa13.41□□□□□ -0.26
VSTM4-201ENST00000298454 Q96NJ1 140 aa13.4□□□□□ -0.26
VSTM4-201ENST00000298454 SMR3BP02814 79 aaPredicted RBP13.39□□□□□ -0.27
VSTM4-201ENST00000298454 SMIM20Q8N5G0 67 aa13.39□□□□□ -0.27
VSTM4-201ENST00000298454 APOBP04114 4563 aaKnown RBP13.39□□□□□ -0.27
VSTM4-201ENST00000298454 KRTAP1-4P0C5Y4 121 aa13.38□□□□□ -0.27
VSTM4-201ENST00000298454 KRTAP13-2Q52LG2 175 aa13.38□□□□□ -0.27
VSTM4-201ENST00000298454 SSBP3-AS1Q7Z2R9 100 aa13.38□□□□□ -0.27
VSTM4-201ENST00000298454 SS18L2Q9UHA2 77 aa13.38□□□□□ -0.27
VSTM4-201ENST00000298454 A8MWP4 228 aa13.37□□□□□ -0.27
VSTM4-201ENST00000298454 HCG22E2RYF7 251 aa13.36□□□□□ -0.27
VSTM4-201ENST00000298454 FAM229BQ4G0N7 80 aa13.35□□□□□ -0.27
VSTM4-201ENST00000298454 PRR15Q8IV56 129 aa13.35□□□□□ -0.27
VSTM4-201ENST00000298454 CYSTM1Q9H1C7 97 aa13.34□□□□□ -0.27
VSTM4-201ENST00000298454 J3KT08 172 aa13.33□□□□□ -0.28
VSTM4-201ENST00000298454 OCR1Q9BZK8 76 aa13.33□□□□□ -0.28
VSTM4-201ENST00000298454 WFDC13Q8IUB5 93 aa13.31□□□□□ -0.28
VSTM4-201ENST00000298454 CD164Q04900 197 aa13.3□□□□□ -0.28
VSTM4-201ENST00000298454 C20orf197Q8N268 126 aa13.3□□□□□ -0.28
VSTM4-201ENST00000298454 RYR3Q15413 4870 aa13.3□□□□□ -0.28
VSTM4-201ENST00000298454 FAT1Q14517 4588 aa13.28□□□□□ -0.28
VSTM4-201ENST00000298454 PLA2G1BP04054 148 aaKnown RBP13.28□□□□□ -0.28
VSTM4-201ENST00000298454 SPINK6Q6UWN8 80 aa13.28□□□□□ -0.28
VSTM4-201ENST00000298454 NDUFB1O75438 58 aa13.25□□□□□ -0.29
VSTM4-201ENST00000298454 KRTAP29-1A8MX34 341 aaPredicted RBP13.24□□□□□ -0.29
VSTM4-201ENST00000298454 CASC2Q6XLA1 102 aa13.22□□□□□ -0.29
VSTM4-201ENST00000298454 KRTAP10-4P60372 401 aaPredicted RBP13.21□□□□□ -0.29
VSTM4-201ENST00000298454 SNURFQ9Y675 71 aa13.2□□□□□ -0.3
VSTM4-201ENST00000298454 MMP24-AS1A0A0U1RRL7 71 aa13.2□□□□□ -0.3
VSTM4-201ENST00000298454 TYMSOSQ8TAI1 123 aa13.17□□□□□ -0.3
VSTM4-201ENST00000298454 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
VSTM4-201ENST00000298454 IGHV6-1A0A0B4J1U7 121 aa13.16□□□□□ -0.3
VSTM4-201ENST00000298454 A0A1B0GVX0 72 aa13.16□□□□□ -0.3
VSTM4-201ENST00000298454 KLKP1Q107X0 134 aa13.16□□□□□ -0.3
VSTM4-201ENST00000298454 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
VSTM4-201ENST00000298454 ASB16-AS1Q495Z4 193 aa13.14□□□□□ -0.31
VSTM4-201ENST00000298454 PRR26Q8N8Z3 221 aa13.14□□□□□ -0.31
VSTM4-201ENST00000298454 C8orf17Q9NRJ1 99 aa13.13□□□□□ -0.31
VSTM4-201ENST00000298454 hDV103S1A0JD37 113 aa13.12□□□□□ -0.31
VSTM4-201ENST00000298454 Q5XG85 94 aa13.1□□□□□ -0.31
VSTM4-201ENST00000298454 NOTCH2NLQ7Z3S9 236 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms