RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FAT2Q9NYQ8 4349 aa13.34□□□□□ -0.27
SOX17-201ENST00000297316 PRLHP81277 87 aa13.34□□□□□ -0.27
SOX17-201ENST00000297316 PDE6GP18545 87 aa13.31□□□□□ -0.28
SOX17-201ENST00000297316 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
SOX17-201ENST00000297316 IGLV5-48A0A075B6I7 105 aa13.31□□□□□ -0.28
SOX17-201ENST00000297316 Q6ZVQ6 151 aa13.31□□□□□ -0.28
SOX17-201ENST00000297316 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
SOX17-201ENST00000297316 HAMPP81172 84 aa13.29□□□□□ -0.28
SOX17-201ENST00000297316 PKD1P98161 4303 aa13.29□□□□□ -0.28
SOX17-201ENST00000297316 SRRM2Q9UQ35 2752 aaKnown RBP13.27□□□□□ -0.28
SOX17-201ENST00000297316 TMEM258P61165 79 aa13.27□□□□□ -0.29
SOX17-201ENST00000297316 J3KT08 172 aa13.25□□□□□ -0.29
SOX17-201ENST00000297316 HIGD2AQ9BW72 106 aa13.24□□□□□ -0.29
SOX17-201ENST00000297316 EPM2AB3EWF7 344 aa13.23□□□□□ -0.29
SOX17-201ENST00000297316 SMIM29Q86T20 159 aa13.22□□□□□ -0.29
SOX17-201ENST00000297316 CXCL6P80162 114 aa13.21□□□□□ -0.3
SOX17-201ENST00000297316 RPS28P62857 69 aaKnown RBP13.19□□□□□ -0.3
SOX17-201ENST00000297316 FAM30AQ9NZY2 134 aa13.18□□□□□ -0.3
SOX17-201ENST00000297316 C20orf197Q8N268 126 aa13.18□□□□□ -0.3
SOX17-201ENST00000297316 PLAC8Q9NZF1 115 aa13.18□□□□□ -0.3
SOX17-201ENST00000297316 SCXQ7RTU7 201 aa13.16□□□□□ -0.3
SOX17-201ENST00000297316 A0A1W2PNM2 257 aa13.16□□□□□ -0.3
SOX17-201ENST00000297316 C1orf137Q5JT78 98 aa13.16□□□□□ -0.3
SOX17-201ENST00000297316 BCE1O60756 84 aa13.15□□□□□ -0.3
SOX17-201ENST00000297316 LCE6AA0A183 80 aa13.14□□□□□ -0.31
SOX17-201ENST00000297316 TRAV7A0A075B6U4 112 aa13.14□□□□□ -0.31
SOX17-201ENST00000297316 H0Y9J4 135 aa13.14□□□□□ -0.31
SOX17-201ENST00000297316 UBE2AP49459 152 aa13.13□□□□□ -0.31
SOX17-201ENST00000297316 A0A0G2JQZ4 141 aa13.13□□□□□ -0.31
SOX17-201ENST00000297316 KRTAP13-1Q8IUC0 172 aa13.12□□□□□ -0.31
SOX17-201ENST00000297316 KRTAP10-1P60331 282 aa13.12□□□□□ -0.31
SOX17-201ENST00000297316 KMT2CQ8NEZ4 4911 aaKnown RBP13.11□□□□□ -0.31
SOX17-201ENST00000297316 PSORS1C2Q9UIG4 136 aa13.1□□□□□ -0.31
SOX17-201ENST00000297316 OXTP01178 125 aa13.08□□□□□ -0.32
SOX17-201ENST00000297316 Q8NBF4 154 aa13.08□□□□□ -0.32
SOX17-201ENST00000297316 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
SOX17-201ENST00000297316 CIRBP-AS1Q8TBR5 109 aa13.07□□□□□ -0.32
SOX17-201ENST00000297316 RYR2Q92736 4967 aa13.07□□□□□ -0.32
SOX17-201ENST00000297316 F8WEM9 126 aa13.05□□□□□ -0.32
SOX17-201ENST00000297316 IGFL1Q6UW32 110 aa13.05□□□□□ -0.32
SOX17-201ENST00000297316 SPRR1BP22528 89 aa13.04□□□□□ -0.32
SOX17-201ENST00000297316 H7BZZ5 65 aa13.03□□□□□ -0.32
SOX17-201ENST00000297316 NREPQ16612 68 aa13.03□□□□□ -0.32
SOX17-201ENST00000297316 SPRR4Q96PI1 79 aa13.03□□□□□ -0.32
SOX17-201ENST00000297316 KLKP1Q107X0 134 aa13.02□□□□□ -0.33
SOX17-201ENST00000297316 IGLV8-61A0A075B6I0 122 aa13.01□□□□□ -0.33
SOX17-201ENST00000297316 Q6ZSA8 131 aa13.01□□□□□ -0.33
SOX17-201ENST00000297316 Q8N9L7 120 aa13.01□□□□□ -0.33
SOX17-201ENST00000297316 SNURFQ9Y675 71 aa13.01□□□□□ -0.33
SOX17-201ENST00000297316 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
SOX17-201ENST00000297316 FAM236DA0A1B0GTK5 79 aa13□□□□□ -0.33
SOX17-201ENST00000297316 FAM236CP0DP71 79 aa13□□□□□ -0.33
SOX17-201ENST00000297316 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
SOX17-201ENST00000297316 BPY2O14599 106 aa12.96□□□□□ -0.33
SOX17-201ENST00000297316 A0A1B0GW54 56 aa12.96□□□□□ -0.34
SOX17-201ENST00000297316 ZNF861PO60384 105 aa12.92□□□□□ -0.34
SOX17-201ENST00000297316 LINC00336Q6ZUF6 198 aa12.91□□□□□ -0.34
SOX17-201ENST00000297316 DYNC1H1Q14204 4646 aaKnown RBP12.91□□□□□ -0.34
SOX17-201ENST00000297316 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
SOX17-201ENST00000297316 A0A1B0GVY2 172 aa12.88□□□□□ -0.35
SOX17-201ENST00000297316 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
SOX17-201ENST00000297316 A0A087WSZ3 146 aa12.88□□□□□ -0.35
SOX17-201ENST00000297316 Q5XG85 94 aa12.87□□□□□ -0.35
SOX17-201ENST00000297316 SERP1Q9Y6X1 66 aa12.86□□□□□ -0.35
SOX17-201ENST00000297316 LINC00483Q53H64 154 aa12.85□□□□□ -0.35
SOX17-201ENST00000297316 TMEM254Q8TBM7 123 aa12.85□□□□□ -0.35
SOX17-201ENST00000297316 C4orf26Q17RF5 130 aa12.84□□□□□ -0.35
SOX17-201ENST00000297316 OCR1Q9BZK8 76 aa12.84□□□□□ -0.35
SOX17-201ENST00000297316 VPS13BQ7Z7G8 4022 aa12.84□□□□□ -0.35
SOX17-201ENST00000297316 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
SOX17-201ENST00000297316 NDUFC1O43677 76 aa12.84□□□□□ -0.35
SOX17-201ENST00000297316 DSCR10P59022 87 aa12.83□□□□□ -0.36
SOX17-201ENST00000297316 HRCT1Q6UXD1 115 aa12.82□□□□□ -0.36
SOX17-201ENST00000297316 DEFB116Q30KQ4 102 aa12.82□□□□□ -0.36
SOX17-201ENST00000297316 RYR3Q15413 4870 aa12.8□□□□□ -0.36
SOX17-201ENST00000297316 ZNF706Q9Y5V0 76 aaPredicted RBP12.78□□□□□ -0.36
SOX17-201ENST00000297316 K7EQZ3 153 aa12.77□□□□□ -0.37
SOX17-201ENST00000297316 A0A0U1RQV1 116 aa12.75□□□□□ -0.37
SOX17-201ENST00000297316 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
SOX17-201ENST00000297316 MOBPQ13875 183 aa12.72□□□□□ -0.37
SOX17-201ENST00000297316 ATP5EP56381 51 aaPredicted RBP12.72□□□□□ -0.37
SOX17-201ENST00000297316 RPL37AP61513 92 aaKnown RBP12.7□□□□□ -0.38
SOX17-201ENST00000297316 SMR3BP02814 79 aaPredicted RBP12.7□□□□□ -0.38
SOX17-201ENST00000297316 LINC00472Q9H8W2 130 aa12.68□□□□□ -0.38
SOX17-201ENST00000297316 FAT1Q14517 4588 aa12.66□□□□□ -0.38
SOX17-201ENST00000297316 SMIM26A0A096LP01 95 aa12.65□□□□□ -0.38
SOX17-201ENST00000297316 PRO0628Q9UI54 55 aa12.65□□□□□ -0.38
SOX17-201ENST00000297316 FP248Q71RG6 208 aaPredicted RBP12.64□□□□□ -0.39
SOX17-201ENST00000297316 A0A087X002 238 aa12.6□□□□□ -0.39
SOX17-201ENST00000297316 Q96NJ1 140 aa12.6□□□□□ -0.39
SOX17-201ENST00000297316 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
SOX17-201ENST00000297316 KRTAP1-4P0C5Y4 121 aa12.56□□□□□ -0.4
SOX17-201ENST00000297316 A8MWP4 228 aa12.55□□□□□ -0.4
SOX17-201ENST00000297316 KRTAP13-2Q52LG2 175 aa12.55□□□□□ -0.4
SOX17-201ENST00000297316 WFDC13Q8IUB5 93 aa12.55□□□□□ -0.4
SOX17-201ENST00000297316 PRR15Q8IV56 129 aa12.55□□□□□ -0.4
SOX17-201ENST00000297316 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
SOX17-201ENST00000297316 ZCCHC13Q8WW36 166 aaKnown RBP12.51□□□□□ -0.41
SOX17-201ENST00000297316 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
SOX17-201ENST00000297316 KRTAP10-4P60372 401 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms