RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 A8MUN3 132 aa8.85□□□□□ -0.99
HPS3-201ENST00000296051 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
HPS3-201ENST00000296051 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
HPS3-201ENST00000296051 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
HPS3-201ENST00000296051 IGKV2-30P06310 120 aa8.82□□□□□ -1
HPS3-201ENST00000296051 Q8N377 158 aa8.82□□□□□ -1
HPS3-201ENST00000296051 Q8NDZ9 215 aa8.82□□□□□ -1
HPS3-201ENST00000296051 hDV103S1A0JD37 113 aa8.81□□□□□ -1
HPS3-201ENST00000296051 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
HPS3-201ENST00000296051 GVQW2A0A096LPI5 108 aaPredicted RBP8.81□□□□□ -1
HPS3-201ENST00000296051 A0A087WTM6 91 aa8.79□□□□□ -1
HPS3-201ENST00000296051 CSMD2Q7Z408 3487 aa8.79□□□□□ -1
HPS3-201ENST00000296051 OXTP01178 125 aa8.78□□□□□ -1
HPS3-201ENST00000296051 PRR34Q9NV39 138 aa8.78□□□□□ -1
HPS3-201ENST00000296051 HIVEP1P15822 2718 aa8.77□□□□□ -1
HPS3-201ENST00000296051 HRNRQ86YZ3 2850 aaPredicted RBP8.77□□□□□ -1.01
HPS3-201ENST00000296051 C15orf56Q8N910 161 aa8.77□□□□□ -1.01
HPS3-201ENST00000296051 Q5XG85 94 aa8.75□□□□□ -1.01
HPS3-201ENST00000296051 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
HPS3-201ENST00000296051 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
HPS3-201ENST00000296051 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
HPS3-201ENST00000296051 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
HPS3-201ENST00000296051 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
HPS3-201ENST00000296051 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
HPS3-201ENST00000296051 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
HPS3-201ENST00000296051 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
HPS3-201ENST00000296051 C9orf163Q8N9P6 203 aa8.7□□□□□ -1.02
HPS3-201ENST00000296051 APCP25054 2843 aa8.7□□□□□ -1.02
HPS3-201ENST00000296051 IGFL1Q6UW32 110 aa8.69□□□□□ -1.02
HPS3-201ENST00000296051 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
HPS3-201ENST00000296051 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
HPS3-201ENST00000296051 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
HPS3-201ENST00000296051 TNP2Q05952 138 aa8.67□□□□□ -1.02
HPS3-201ENST00000296051 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
HPS3-201ENST00000296051 A0A1B0GW54 56 aa8.67□□□□□ -1.02
HPS3-201ENST00000296051 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
HPS3-201ENST00000296051 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
HPS3-201ENST00000296051 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
HPS3-201ENST00000296051 BSNQ9UPA5 3926 aa8.63□□□□□ -1.03
HPS3-201ENST00000296051 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
HPS3-201ENST00000296051 Q96NJ1 140 aa8.63□□□□□ -1.03
HPS3-201ENST00000296051 COA5Q86WW8 74 aa8.62□□□□□ -1.03
HPS3-201ENST00000296051 ZNF861PO60384 105 aa8.62□□□□□ -1.03
HPS3-201ENST00000296051 LINC00313P59037 77 aa8.62□□□□□ -1.03
HPS3-201ENST00000296051 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
HPS3-201ENST00000296051 WIPF1O43516 503 aa8.61□□□□□ -1.03
HPS3-201ENST00000296051 ZFHX3Q15911 3703 aa8.6□□□□□ -1.03
HPS3-201ENST00000296051 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
HPS3-201ENST00000296051 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
HPS3-201ENST00000296051 VPS13CQ709C8 3753 aa8.59□□□□□ -1.03
HPS3-201ENST00000296051 A8MWP4 228 aa8.59□□□□□ -1.03
HPS3-201ENST00000296051 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.04
HPS3-201ENST00000296051 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
HPS3-201ENST00000296051 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
HPS3-201ENST00000296051 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
HPS3-201ENST00000296051 DSCR10P59022 87 aa8.58□□□□□ -1.04
HPS3-201ENST00000296051 A0A1B0GU69 56 aa8.56□□□□□ -1.04
HPS3-201ENST00000296051 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
HPS3-201ENST00000296051 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
HPS3-201ENST00000296051 H3BPC8 53 aa8.54□□□□□ -1.04
HPS3-201ENST00000296051 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
HPS3-201ENST00000296051 ACYP2P14621 99 aa8.51□□□□□ -1.05
HPS3-201ENST00000296051 SSBP3-AS1Q7Z2R9 100 aa8.51□□□□□ -1.05
HPS3-201ENST00000296051 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
HPS3-201ENST00000296051 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
HPS3-201ENST00000296051 MRPL34Q9BQ48 92 aaKnown RBP8.46□□□□□ -1.05
HPS3-201ENST00000296051 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.05
HPS3-201ENST00000296051 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
HPS3-201ENST00000296051 CYP4F30PQ9H0H9 118 aa8.45□□□□□ -1.06
HPS3-201ENST00000296051 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
HPS3-201ENST00000296051 SPRR4Q96PI1 79 aa8.44□□□□□ -1.06
HPS3-201ENST00000296051 Q1T7F1 81 aa8.42□□□□□ -1.06
HPS3-201ENST00000296051 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
HPS3-201ENST00000296051 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
HPS3-201ENST00000296051 CD164Q04900 197 aa8.4□□□□□ -1.06
HPS3-201ENST00000296051 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
HPS3-201ENST00000296051 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
HPS3-201ENST00000296051 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
HPS3-201ENST00000296051 A0A1B0GVX0 72 aa8.38□□□□□ -1.07
HPS3-201ENST00000296051 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
HPS3-201ENST00000296051 SPANXA2-OT1Q8N9U9 137 aa8.35□□□□□ -1.07
HPS3-201ENST00000296051 LCE6AA0A183 80 aa8.34□□□□□ -1.07
HPS3-201ENST00000296051 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
HPS3-201ENST00000296051 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
HPS3-201ENST00000296051 Q5VV11 94 aa8.31□□□□□ -1.08
HPS3-201ENST00000296051 SPRR1AP35321 89 aa8.3□□□□□ -1.08
HPS3-201ENST00000296051 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
HPS3-201ENST00000296051 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
HPS3-201ENST00000296051 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
HPS3-201ENST00000296051 UQCR11O14957 56 aa8.28□□□□□ -1.08
HPS3-201ENST00000296051 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
HPS3-201ENST00000296051 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
HPS3-201ENST00000296051 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
HPS3-201ENST00000296051 Q6ZSA8 131 aa8.24□□□□□ -1.09
HPS3-201ENST00000296051 M0R2T5 61 aa8.24□□□□□ -1.09
HPS3-201ENST00000296051 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
HPS3-201ENST00000296051 Q5VSD8 79 aa8.22□□□□□ -1.09
HPS3-201ENST00000296051 A8MU10 97 aa8.22□□□□□ -1.09
HPS3-201ENST00000296051 LCA10Q71F78 164 aa8.21□□□□□ -1.09
HPS3-201ENST00000296051 KRTAP10-2P60368 255 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms