RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 M0R2T5 61 aa10.4□□□□□ -0.74
CXCL3-201ENST00000296026 COX6B2Q6YFQ2 88 aa10.4□□□□□ -0.74
CXCL3-201ENST00000296026 VAMP3Q15836 100 aa10.38□□□□□ -0.75
CXCL3-201ENST00000296026 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
CXCL3-201ENST00000296026 SNRPEP62304 92 aaKnown RBP10.35□□□□□ -0.75
CXCL3-201ENST00000296026 Q6ZQY7 126 aa10.35□□□□□ -0.75
CXCL3-201ENST00000296026 hADV29S1A0JD25 119 aa10.33□□□□□ -0.76
CXCL3-201ENST00000296026 Q6JHZ5 121 aa10.33□□□□□ -0.76
CXCL3-201ENST00000296026 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
CXCL3-201ENST00000296026 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
CXCL3-201ENST00000296026 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
CXCL3-201ENST00000296026 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
CXCL3-201ENST00000296026 OBSCN-AS1Q96MR7 158 aa10.26□□□□□ -0.77
CXCL3-201ENST00000296026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
CXCL3-201ENST00000296026 ATP11AUNQ6ZP68 121 aa10.25□□□□□ -0.77
CXCL3-201ENST00000296026 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
CXCL3-201ENST00000296026 Q75L30 129 aa10.23□□□□□ -0.77
CXCL3-201ENST00000296026 BVES-AS1Q5T3Y7 98 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 Q6Q795 121 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 HIST3H2BBQ8N257 126 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 PPDPFLQ8WWR9 84 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 C12orf57Q99622 126 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 HIST1H2BLQ99880 126 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 SNHG12Q9BXW3 62 aa10.21□□□□□ -0.77
CXCL3-201ENST00000296026 FLGP20930 4061 aaPredicted RBP10.21□□□□□ -0.78
CXCL3-201ENST00000296026 S100A2P29034 98 aa10.2□□□□□ -0.78
CXCL3-201ENST00000296026 H3BUT2 72 aa10.19□□□□□ -0.78
CXCL3-201ENST00000296026 LST1O00453 97 aa10.19□□□□□ -0.78
CXCL3-201ENST00000296026 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
CXCL3-201ENST00000296026 SCGB1D1O95968 90 aa10.16□□□□□ -0.78
CXCL3-201ENST00000296026 Q96NJ1 140 aa10.16□□□□□ -0.78
CXCL3-201ENST00000296026 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
CXCL3-201ENST00000296026 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
CXCL3-201ENST00000296026 COX8AP10176 69 aa10.08□□□□□ -0.8
CXCL3-201ENST00000296026 C20orf166-AS1Q96NR2 134 aa10.08□□□□□ -0.8
CXCL3-201ENST00000296026 TEN1Q86WV5 123 aa10.07□□□□□ -0.8
CXCL3-201ENST00000296026 A8MUU9 505 aa10.06□□□□□ -0.8
CXCL3-201ENST00000296026 SNCGO76070 127 aa10.06□□□□□ -0.8
CXCL3-201ENST00000296026 S100A6P06703 90 aa10.06□□□□□ -0.8
CXCL3-201ENST00000296026 CFC1P0CG37 223 aa10.06□□□□□ -0.8
CXCL3-201ENST00000296026 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
CXCL3-201ENST00000296026 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
CXCL3-201ENST00000296026 A0A087WSZ3 146 aa10.04□□□□□ -0.8
CXCL3-201ENST00000296026 H0YGX0 51 aa10.04□□□□□ -0.8
CXCL3-201ENST00000296026 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
CXCL3-201ENST00000296026 DLEU1O43261 78 aa10.03□□□□□ -0.8
CXCL3-201ENST00000296026 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
CXCL3-201ENST00000296026 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
CXCL3-201ENST00000296026 H3BMG7 143 aa9.99□□□□□ -0.81
CXCL3-201ENST00000296026 DSCR10P59022 87 aa9.99□□□□□ -0.81
CXCL3-201ENST00000296026 C14orf144Q96I85 54 aa9.99□□□□□ -0.81
CXCL3-201ENST00000296026 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
CXCL3-201ENST00000296026 HIGD1BQ9P298 99 aa9.97□□□□□ -0.81
CXCL3-201ENST00000296026 FABP2P12104 132 aa9.96□□□□□ -0.82
CXCL3-201ENST00000296026 GHRHP01286 108 aa9.95□□□□□ -0.82
CXCL3-201ENST00000296026 A0A1B0GX51 115 aa9.94□□□□□ -0.82
CXCL3-201ENST00000296026 SIGMAR1Q99720 223 aa9.94□□□□□ -0.82
CXCL3-201ENST00000296026 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
CXCL3-201ENST00000296026 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
CXCL3-201ENST00000296026 PAM16Q9Y3D7 125 aa9.92□□□□□ -0.82
CXCL3-201ENST00000296026 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
CXCL3-201ENST00000296026 KRTAP16-1A8MUX0 517 aa9.9□□□□□ -0.82
CXCL3-201ENST00000296026 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.82
CXCL3-201ENST00000296026 LINC00313P59037 77 aa9.89□□□□□ -0.83
CXCL3-201ENST00000296026 CEND1Q8N111 149 aa9.89□□□□□ -0.83
CXCL3-201ENST00000296026 S100A1P23297 94 aa9.88□□□□□ -0.83
CXCL3-201ENST00000296026 IGKV4-1P06312 121 aa9.87□□□□□ -0.83
CXCL3-201ENST00000296026 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
CXCL3-201ENST00000296026 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
CXCL3-201ENST00000296026 A6NJY4 79 aa9.86□□□□□ -0.83
CXCL3-201ENST00000296026 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
CXCL3-201ENST00000296026 TRIAP1O43715 76 aa9.85□□□□□ -0.83
CXCL3-201ENST00000296026 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
CXCL3-201ENST00000296026 VAMP8Q9BV40 100 aa9.85□□□□□ -0.83
CXCL3-201ENST00000296026 TRBV7-4A0A0J9YYF1 115 aa9.84□□□□□ -0.83
CXCL3-201ENST00000296026 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.84□□□□□ -0.83
CXCL3-201ENST00000296026 A0A1B0GV72 72 aa9.83□□□□□ -0.84
CXCL3-201ENST00000296026 FXYD2P54710 66 aa9.83□□□□□ -0.84
CXCL3-201ENST00000296026 MT2AP02795 61 aa9.82□□□□□ -0.84
CXCL3-201ENST00000296026 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
CXCL3-201ENST00000296026 DNAL4O96015 105 aa9.81□□□□□ -0.84
CXCL3-201ENST00000296026 DEFB116Q30KQ4 102 aa9.81□□□□□ -0.84
CXCL3-201ENST00000296026 ORMDL1Q9P0S3 153 aa9.81□□□□□ -0.84
CXCL3-201ENST00000296026 USH2AO75445 5202 aa9.8□□□□□ -0.84
CXCL3-201ENST00000296026 KRTAP9-7A8MTY7 169 aa9.8□□□□□ -0.84
CXCL3-201ENST00000296026 HRES1P13985 223 aa9.79□□□□□ -0.84
CXCL3-201ENST00000296026 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
CXCL3-201ENST00000296026 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
CXCL3-201ENST00000296026 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
CXCL3-201ENST00000296026 H3BQ85 93 aa9.77□□□□□ -0.85
CXCL3-201ENST00000296026 IGHV6-1A0A0B4J1U7 121 aa9.76□□□□□ -0.85
CXCL3-201ENST00000296026 CCKP06307 115 aa9.76□□□□□ -0.85
CXCL3-201ENST00000296026 SSPOA2VEC9 5147 aa9.76□□□□□ -0.85
CXCL3-201ENST00000296026 TMEM256-PLSCR3K7ERE1 68 aa9.75□□□□□ -0.85
CXCL3-201ENST00000296026 TRACP01848 142 aa9.75□□□□□ -0.85
CXCL3-201ENST00000296026 PSMB2P49721 201 aa9.75□□□□□ -0.85
CXCL3-201ENST00000296026 MT1FP04733 61 aa9.74□□□□□ -0.85
CXCL3-201ENST00000296026 K7ERJ3 54 aa9.71□□□□□ -0.86
CXCL3-201ENST00000296026 COX6CP09669 75 aa9.7□□□□□ -0.86
CXCL3-201ENST00000296026 KRTAP10-10P60014 251 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms