RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
CNOT9-202ENST00000295701 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
CNOT9-202ENST00000295701 TIMM17BO60830 172 aa4.86□□□□□ -1.63
CNOT9-202ENST00000295701 USH2AO75445 5202 aa4.86□□□□□ -1.63
CNOT9-202ENST00000295701 ZNF815PA8K554 130 aa4.85□□□□□ -1.63
CNOT9-202ENST00000295701 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
CNOT9-202ENST00000295701 IGLV5-48A0A075B6I7 105 aa4.84□□□□□ -1.63
CNOT9-202ENST00000295701 SYS1-DBNDD2H3BUS1 97 aa4.84□□□□□ -1.63
CNOT9-202ENST00000295701 Q6Q795 121 aa4.84□□□□□ -1.63
CNOT9-202ENST00000295701 LINC00518Q8N0U6 118 aa4.84□□□□□ -1.63
CNOT9-202ENST00000295701 COLCA2A8K830 154 aa4.83□□□□□ -1.64
CNOT9-202ENST00000295701 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
CNOT9-202ENST00000295701 LINC01545Q5VT33 79 aa4.82□□□□□ -1.64
CNOT9-202ENST00000295701 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
CNOT9-202ENST00000295701 IGKV2D-30A0A075B6S6 120 aa4.81□□□□□ -1.64
CNOT9-202ENST00000295701 A0A1B0GWB2 263 aa4.81□□□□□ -1.64
CNOT9-202ENST00000295701 A6NDN8 102 aa4.8□□□□□ -1.64
CNOT9-202ENST00000295701 PCP2Q8IVA1 136 aa4.8□□□□□ -1.64
CNOT9-202ENST00000295701 TCL1BO95988 128 aa4.79□□□□□ -1.64
CNOT9-202ENST00000295701 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
CNOT9-202ENST00000295701 SMIM11BQ8TCY0 68 aa4.79□□□□□ -1.64
CNOT9-202ENST00000295701 OBSCN-AS1Q96MR7 158 aa4.79□□□□□ -1.64
CNOT9-202ENST00000295701 C3orf79P0CE67 100 aa4.78□□□□□ -1.64
CNOT9-202ENST00000295701 PET117Q6UWS5 81 aa4.78□□□□□ -1.64
CNOT9-202ENST00000295701 HIST1H2BKO60814 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BJP06899 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BOP23527 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BBP33778 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BDP58876 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BCP62807 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST2H2BEQ16778 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.77□□□□□ -1.65
CNOT9-202ENST00000295701 SCGB1D4Q6XE38 83 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 SLC7A5P1Q8MH63 180 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BHQ93079 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BNQ99877 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 HIST1H2BMQ99879 126 aa4.77□□□□□ -1.65
CNOT9-202ENST00000295701 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
CNOT9-202ENST00000295701 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
CNOT9-202ENST00000295701 Q75L30 129 aa4.76□□□□□ -1.65
CNOT9-202ENST00000295701 TRBV7-7A0A0K0K1E9 115 aa4.75□□□□□ -1.65
CNOT9-202ENST00000295701 A4D1N5 150 aa4.75□□□□□ -1.65
CNOT9-202ENST00000295701 IFITM1P13164 125 aa4.75□□□□□ -1.65
CNOT9-202ENST00000295701 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
CNOT9-202ENST00000295701 ATOH7Q8N100 152 aa4.75□□□□□ -1.65
CNOT9-202ENST00000295701 F8WEM9 126 aa4.74□□□□□ -1.65
CNOT9-202ENST00000295701 KRTDAPP60985 99 aa4.74□□□□□ -1.65
CNOT9-202ENST00000295701 TRAV13-2A0A0B4J235 113 aa4.73□□□□□ -1.65
CNOT9-202ENST00000295701 LINC00575Q6W349 94 aa4.73□□□□□ -1.65
CNOT9-202ENST00000295701 Q6ZQY7 126 aa4.73□□□□□ -1.65
CNOT9-202ENST00000295701 Q96NJ1 140 aa4.73□□□□□ -1.65
CNOT9-202ENST00000295701 NHP2Q9NX24 153 aaKnown RBP4.73□□□□□ -1.65
CNOT9-202ENST00000295701 OCIAD2Q56VL3 154 aa4.72□□□□□ -1.65
CNOT9-202ENST00000295701 COPS9Q8WXC6 57 aa4.72□□□□□ -1.65
CNOT9-202ENST00000295701 CLEC2BQ92478 149 aa4.72□□□□□ -1.65
CNOT9-202ENST00000295701 hADV29S1A0JD25 119 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 C20orf202A1L168 122 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 CFC1P0CG37 223 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 Q6JHZ5 121 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 Q6ZVH6 145 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
CNOT9-202ENST00000295701 H3BUT2 72 aa4.7□□□□□ -1.66
CNOT9-202ENST00000295701 MT2AP02795 61 aa4.7□□□□□ -1.66
CNOT9-202ENST00000295701 LST1O00453 97 aa4.69□□□□□ -1.66
CNOT9-202ENST00000295701 VAMP3Q15836 100 aa4.69□□□□□ -1.66
CNOT9-202ENST00000295701 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
CNOT9-202ENST00000295701 A8MUU9 505 aa4.68□□□□□ -1.66
CNOT9-202ENST00000295701 KRTAP16-1A8MUX0 517 aa4.68□□□□□ -1.66
CNOT9-202ENST00000295701 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
CNOT9-202ENST00000295701 MT1FP04733 61 aa4.67□□□□□ -1.66
CNOT9-202ENST00000295701 COA6Q5JTJ3 125 aaKnown RBP4.66□□□□□ -1.66
CNOT9-202ENST00000295701 TRBV20-1A0A075B6N2 111 aa4.65□□□□□ -1.67
CNOT9-202ENST00000295701 DSCR10P59022 87 aa4.65□□□□□ -1.67
CNOT9-202ENST00000295701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.65□□□□□ -1.67
CNOT9-202ENST00000295701 C12orf57Q99622 126 aa4.65□□□□□ -1.67
CNOT9-202ENST00000295701 SNHG12Q9BXW3 62 aa4.65□□□□□ -1.67
CNOT9-202ENST00000295701 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
CNOT9-202ENST00000295701 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
CNOT9-202ENST00000295701 A0A087WSZ3 146 aa4.61□□□□□ -1.67
CNOT9-202ENST00000295701 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
CNOT9-202ENST00000295701 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
CNOT9-202ENST00000295701 PCP4P48539 62 aa4.61□□□□□ -1.67
CNOT9-202ENST00000295701 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
CNOT9-202ENST00000295701 HRES1P13985 223 aa4.6□□□□□ -1.67
CNOT9-202ENST00000295701 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
CNOT9-202ENST00000295701 PPDPFLQ8WWR9 84 aa4.6□□□□□ -1.67
CNOT9-202ENST00000295701 BVES-AS1Q5T3Y7 98 aa4.59□□□□□ -1.67
CNOT9-202ENST00000295701 NOTCH2NLQ7Z3S9 236 aa4.59□□□□□ -1.67
CNOT9-202ENST00000295701 FAM218AQ96MZ4 157 aa4.59□□□□□ -1.67
CNOT9-202ENST00000295701 SS18L2Q9UHA2 77 aa4.59□□□□□ -1.67
CNOT9-202ENST00000295701 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
CNOT9-202ENST00000295701 NDUFV3P56181 108 aaKnown RBP4.58□□□□□ -1.68
CNOT9-202ENST00000295701 SNRPEP62304 92 aaKnown RBP4.58□□□□□ -1.68
CNOT9-202ENST00000295701 SIGMAR1Q99720 223 aa4.57□□□□□ -1.68
CNOT9-202ENST00000295701 A0A1W2PNM2 257 aa4.56□□□□□ -1.68
CNOT9-202ENST00000295701 H3BMG7 143 aa4.56□□□□□ -1.68
CNOT9-202ENST00000295701 LINC00313P59037 77 aa4.56□□□□□ -1.68
CNOT9-202ENST00000295701 HIST1H4GQ99525 98 aa4.56□□□□□ -1.68
CNOT9-202ENST00000295701 DEFB116Q30KQ4 102 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms