RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
CCDC140-201ENST00000295226 PRLHP81277 87 aa9.28□□□□□ -0.92
CCDC140-201ENST00000295226 Q5VSD8 79 aa9.28□□□□□ -0.92
CCDC140-201ENST00000295226 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
CCDC140-201ENST00000295226 Q6ZQY7 126 aa9.27□□□□□ -0.93
CCDC140-201ENST00000295226 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
CCDC140-201ENST00000295226 RBM3P98179 157 aaKnown RBP9.26□□□□□ -0.93
CCDC140-201ENST00000295226 UBE2AP49459 152 aa9.26□□□□□ -0.93
CCDC140-201ENST00000295226 Q8N1X5 172 aa9.26□□□□□ -0.93
CCDC140-201ENST00000295226 LOC110117498A0A087WWA1 95 aa9.25□□□□□ -0.93
CCDC140-201ENST00000295226 B5MCH6 92 aa9.25□□□□□ -0.93
CCDC140-201ENST00000295226 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
CCDC140-201ENST00000295226 LAMTOR3Q9UHA4 124 aa9.25□□□□□ -0.93
CCDC140-201ENST00000295226 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
CCDC140-201ENST00000295226 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
CCDC140-201ENST00000295226 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
CCDC140-201ENST00000295226 Q6JHZ5 121 aa9.22□□□□□ -0.93
CCDC140-201ENST00000295226 Q6ZRX8 168 aa9.22□□□□□ -0.93
CCDC140-201ENST00000295226 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
CCDC140-201ENST00000295226 Q9BRP9 147 aa9.22□□□□□ -0.93
CCDC140-201ENST00000295226 ZNF861PO60384 105 aa9.21□□□□□ -0.93
CCDC140-201ENST00000295226 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.93
CCDC140-201ENST00000295226 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.93
CCDC140-201ENST00000295226 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.93
CCDC140-201ENST00000295226 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.93
CCDC140-201ENST00000295226 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
CCDC140-201ENST00000295226 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
CCDC140-201ENST00000295226 ATP5EP2Q5VTU8 51 aa9.2□□□□□ -0.94
CCDC140-201ENST00000295226 HERC2O95714 4834 aa9.19□□□□□ -0.94
CCDC140-201ENST00000295226 Q6ZQT0 140 aa9.19□□□□□ -0.94
CCDC140-201ENST00000295226 H0Y9J4 135 aa9.17□□□□□ -0.94
CCDC140-201ENST00000295226 UBL5Q9BZL1 73 aa9.17□□□□□ -0.94
CCDC140-201ENST00000295226 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
CCDC140-201ENST00000295226 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.94
CCDC140-201ENST00000295226 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
CCDC140-201ENST00000295226 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
CCDC140-201ENST00000295226 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
CCDC140-201ENST00000295226 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
CCDC140-201ENST00000295226 FAM236AA0A1B0GUQ0 79 aa9.1□□□□□ -0.95
CCDC140-201ENST00000295226 FAM236BA0A1B0GV22 79 aa9.1□□□□□ -0.95
CCDC140-201ENST00000295226 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
CCDC140-201ENST00000295226 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
CCDC140-201ENST00000295226 A0A1B0GW54 56 aa9.08□□□□□ -0.96
CCDC140-201ENST00000295226 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
CCDC140-201ENST00000295226 HIST1H4AP62805 103 aaKnown RBP9.07□□□□□ -0.96
CCDC140-201ENST00000295226 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
CCDC140-201ENST00000295226 Q8N377 158 aa9.07□□□□□ -0.96
CCDC140-201ENST00000295226 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
CCDC140-201ENST00000295226 ATOX1O00244 68 aa9.06□□□□□ -0.96
CCDC140-201ENST00000295226 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
CCDC140-201ENST00000295226 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
CCDC140-201ENST00000295226 CXCL6P80162 114 aa9.04□□□□□ -0.96
CCDC140-201ENST00000295226 Q6ZVQ6 151 aa9.04□□□□□ -0.96
CCDC140-201ENST00000295226 LRP1Q07954 4544 aaKnown RBP9.03□□□□□ -0.96
CCDC140-201ENST00000295226 ZNF706Q9Y5V0 76 aaPredicted RBP9.02□□□□□ -0.97
CCDC140-201ENST00000295226 C3orf22Q8N5N4 141 aa9.01□□□□□ -0.97
CCDC140-201ENST00000295226 MYCBP2O75592 4640 aa9.01□□□□□ -0.97
CCDC140-201ENST00000295226 A0A087X002 238 aa9□□□□□ -0.97
CCDC140-201ENST00000295226 LINC00483Q53H64 154 aa8.99□□□□□ -0.97
CCDC140-201ENST00000295226 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
CCDC140-201ENST00000295226 FAT3Q8TDW7 4589 aa8.98□□□□□ -0.97
CCDC140-201ENST00000295226 UQCRQO14949 82 aa8.97□□□□□ -0.97
CCDC140-201ENST00000295226 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
CCDC140-201ENST00000295226 F8WEM9 126 aa8.97□□□□□ -0.97
CCDC140-201ENST00000295226 SPRR1BP22528 89 aa8.97□□□□□ -0.97
CCDC140-201ENST00000295226 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
CCDC140-201ENST00000295226 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
CCDC140-201ENST00000295226 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
CCDC140-201ENST00000295226 A0A087WVE0 104 aa8.94□□□□□ -0.98
CCDC140-201ENST00000295226 CRYGAP11844 174 aa8.94□□□□□ -0.98
CCDC140-201ENST00000295226 COX7CP15954 63 aa8.94□□□□□ -0.98
CCDC140-201ENST00000295226 NREPQ16612 68 aa8.94□□□□□ -0.98
CCDC140-201ENST00000295226 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
CCDC140-201ENST00000295226 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
CCDC140-201ENST00000295226 Q8NBF4 154 aa8.93□□□□□ -0.98
CCDC140-201ENST00000295226 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
CCDC140-201ENST00000295226 MOBPQ13875 183 aa8.91□□□□□ -0.98
CCDC140-201ENST00000295226 IGLV8-61A0A075B6I0 122 aa8.91□□□□□ -0.98
CCDC140-201ENST00000295226 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
CCDC140-201ENST00000295226 C9orf153Q5TBE3 101 aa8.91□□□□□ -0.98
CCDC140-201ENST00000295226 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
CCDC140-201ENST00000295226 TNXBP22105 4242 aa8.9□□□□□ -0.98
CCDC140-201ENST00000295226 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
CCDC140-201ENST00000295226 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
CCDC140-201ENST00000295226 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
CCDC140-201ENST00000295226 SVIPQ8NHG7 77 aa8.88□□□□□ -0.99
CCDC140-201ENST00000295226 MT1HL1P0DM35 61 aa8.88□□□□□ -0.99
CCDC140-201ENST00000295226 BPY2O14599 106 aa8.87□□□□□ -0.99
CCDC140-201ENST00000295226 OXTP01178 125 aa8.87□□□□□ -0.99
CCDC140-201ENST00000295226 KRTAP29-1A8MX34 341 aaPredicted RBP8.85□□□□□ -0.99
CCDC140-201ENST00000295226 LCE2BO14633 110 aa8.85□□□□□ -0.99
CCDC140-201ENST00000295226 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
CCDC140-201ENST00000295226 IGFL1Q6UW32 110 aa8.81□□□□□ -1
CCDC140-201ENST00000295226 HRCT1Q6UXD1 115 aa8.81□□□□□ -1
CCDC140-201ENST00000295226 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CCDC140-201ENST00000295226 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
CCDC140-201ENST00000295226 J3QL48 77 aa8.8□□□□□ -1
CCDC140-201ENST00000295226 IGKV4-1P06312 121 aa8.78□□□□□ -1
CCDC140-201ENST00000295226 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
CCDC140-201ENST00000295226 SS18L2Q9UHA2 77 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms