RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HIST1H4AP62805 103 aaKnown RBP5.72□□□□□ -1.49
PDPN-201ENST00000294489 C3orf22Q8N5N4 141 aa5.72□□□□□ -1.49
PDPN-201ENST00000294489 HIGD2AQ9BW72 106 aa5.72□□□□□ -1.49
PDPN-201ENST00000294489 PANO1I0J062 215 aa5.72□□□□□ -1.49
PDPN-201ENST00000294489 RTL8CO15255 209 aa5.72□□□□□ -1.49
PDPN-201ENST00000294489 HAMPP81172 84 aa5.72□□□□□ -1.49
PDPN-201ENST00000294489 H0Y9J4 135 aa5.71□□□□□ -1.5
PDPN-201ENST00000294489 OXTP01178 125 aa5.71□□□□□ -1.5
PDPN-201ENST00000294489 F8WEM9 126 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 FUSP35637 526 aaKnown RBP eCLIP5.7□□□□□ -1.5
PDPN-201ENST00000294489 DNAH11Q96DT5 4516 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 UBE2AP49459 152 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 TNP2Q05952 138 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 A0A1B0GW54 56 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 KRTAP11-1Q8IUC1 163 aa5.7□□□□□ -1.5
PDPN-201ENST00000294489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
PDPN-201ENST00000294489 A0A087WVE0 104 aa5.69□□□□□ -1.5
PDPN-201ENST00000294489 CXCL6P80162 114 aa5.69□□□□□ -1.5
PDPN-201ENST00000294489 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
PDPN-201ENST00000294489 PKD1P98161 4303 aa5.69□□□□□ -1.5
PDPN-201ENST00000294489 ATOX1O00244 68 aa5.69□□□□□ -1.5
PDPN-201ENST00000294489 Q5XG85 94 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 IGLV5-52A0A0A0MRZ9 124 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 BCE1O60756 84 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 NREPQ16612 68 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
PDPN-201ENST00000294489 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
PDPN-201ENST00000294489 CD164Q04900 197 aa5.66□□□□□ -1.5
PDPN-201ENST00000294489 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
PDPN-201ENST00000294489 Q8NBF4 154 aa5.66□□□□□ -1.5
PDPN-201ENST00000294489 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
PDPN-201ENST00000294489 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
PDPN-201ENST00000294489 LCE6AA0A183 80 aa5.65□□□□□ -1.51
PDPN-201ENST00000294489 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.51
PDPN-201ENST00000294489 SACSQ9NZJ4 4579 aa5.65□□□□□ -1.51
PDPN-201ENST00000294489 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
PDPN-201ENST00000294489 SPRR4Q96PI1 79 aa5.64□□□□□ -1.51
PDPN-201ENST00000294489 SPRR1BP22528 89 aa5.64□□□□□ -1.51
PDPN-201ENST00000294489 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
PDPN-201ENST00000294489 SCXQ7RTU7 201 aa5.63□□□□□ -1.51
PDPN-201ENST00000294489 Q6ZSA8 131 aa5.63□□□□□ -1.51
PDPN-201ENST00000294489 BPY2O14599 106 aa5.63□□□□□ -1.51
PDPN-201ENST00000294489 UQCRQO14949 82 aa5.63□□□□□ -1.51
PDPN-201ENST00000294489 CRYGAP11844 174 aa5.62□□□□□ -1.51
PDPN-201ENST00000294489 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
PDPN-201ENST00000294489 COX7CP15954 63 aa5.62□□□□□ -1.51
PDPN-201ENST00000294489 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
PDPN-201ENST00000294489 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
PDPN-201ENST00000294489 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
PDPN-201ENST00000294489 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
PDPN-201ENST00000294489 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
PDPN-201ENST00000294489 KRTAP10-1P60331 282 aa5.58□□□□□ -1.52
PDPN-201ENST00000294489 TMEM258P61165 79 aa5.57□□□□□ -1.52
PDPN-201ENST00000294489 Q8N9L7 120 aa5.57□□□□□ -1.52
PDPN-201ENST00000294489 ZNF861PO60384 105 aa5.57□□□□□ -1.52
PDPN-201ENST00000294489 A0A087WSZ3 146 aa5.57□□□□□ -1.52
PDPN-201ENST00000294489 IGKV4-1P06312 121 aa5.57□□□□□ -1.52
PDPN-201ENST00000294489 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
PDPN-201ENST00000294489 CIRBP-AS1Q8TBR5 109 aa5.56□□□□□ -1.52
PDPN-201ENST00000294489 RYR2Q92736 4967 aa5.55□□□□□ -1.52
PDPN-201ENST00000294489 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
PDPN-201ENST00000294489 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
PDPN-201ENST00000294489 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
PDPN-201ENST00000294489 RPL37AP61513 92 aaKnown RBP5.53□□□□□ -1.52
PDPN-201ENST00000294489 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
PDPN-201ENST00000294489 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
PDPN-201ENST00000294489 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
PDPN-201ENST00000294489 DSCR10P59022 87 aa5.52□□□□□ -1.53
PDPN-201ENST00000294489 SRRM2Q9UQ35 2752 aaKnown RBP5.52□□□□□ -1.53
PDPN-201ENST00000294489 CYSTM1Q9H1C7 97 aa5.51□□□□□ -1.53
PDPN-201ENST00000294489 PRR26Q8N8Z3 221 aa5.51□□□□□ -1.53
PDPN-201ENST00000294489 K7EQZ3 153 aa5.5□□□□□ -1.53
PDPN-201ENST00000294489 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
PDPN-201ENST00000294489 MOBPQ13875 183 aa5.49□□□□□ -1.53
PDPN-201ENST00000294489 C20orf197Q8N268 126 aa5.49□□□□□ -1.53
PDPN-201ENST00000294489 ANAPC11Q9NYG5 84 aa5.48□□□□□ -1.53
PDPN-201ENST00000294489 PKHD1P08F94 4074 aa5.48□□□□□ -1.53
PDPN-201ENST00000294489 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
PDPN-201ENST00000294489 HCG22E2RYF7 251 aa5.47□□□□□ -1.53
PDPN-201ENST00000294489 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
PDPN-201ENST00000294489 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
PDPN-201ENST00000294489 RBM12B-AS1Q9P1G2 102 aa5.46□□□□□ -1.53
PDPN-201ENST00000294489 OCR1Q9BZK8 76 aa5.46□□□□□ -1.54
PDPN-201ENST00000294489 DYNC1H1Q14204 4646 aaKnown RBP5.46□□□□□ -1.54
PDPN-201ENST00000294489 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
PDPN-201ENST00000294489 A8MWP4 228 aa5.45□□□□□ -1.54
PDPN-201ENST00000294489 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
PDPN-201ENST00000294489 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
PDPN-201ENST00000294489 NDUFB1O75438 58 aa5.43□□□□□ -1.54
PDPN-201ENST00000294489 SSBP3-AS1Q7Z2R9 100 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 WFDC13Q8IUB5 93 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
PDPN-201ENST00000294489 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms