RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 COX7CP15954 63 aa10.97□□□□□ -0.65
CCDC78-201ENST00000293889 PDE6GP18545 87 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 Q6ZQT0 140 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
CCDC78-201ENST00000293889 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 GHRHP01286 108 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 RBM3P98179 157 aaKnown RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-201ENST00000293889 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
CCDC78-201ENST00000293889 BCE1O60756 84 aa10.94□□□□□ -0.66
CCDC78-201ENST00000293889 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
CCDC78-201ENST00000293889 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
CCDC78-201ENST00000293889 VPS13BQ7Z7G8 4022 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 ETDCA0A1B0GVM5 59 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 CRYGAP11844 174 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 COX7BP24311 80 aa10.92□□□□□ -0.66
CCDC78-201ENST00000293889 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
CCDC78-201ENST00000293889 Q5VSD8 79 aa10.91□□□□□ -0.66
CCDC78-201ENST00000293889 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
CCDC78-201ENST00000293889 C9orf153Q5TBE3 101 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 Q6ZQY7 126 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 UBL5Q9BZL1 73 aa10.9□□□□□ -0.66
CCDC78-201ENST00000293889 PRLHP81277 87 aa10.89□□□□□ -0.67
CCDC78-201ENST00000293889 UBE2AP49459 152 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 Q6ZRX8 168 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 SERP2Q8N6R1 65 aa10.88□□□□□ -0.67
CCDC78-201ENST00000293889 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
CCDC78-201ENST00000293889 SRRM2Q9UQ35 2752 aaKnown RBP10.86□□□□□ -0.67
CCDC78-201ENST00000293889 TRBV7-4A0A0J9YYF1 115 aa10.86□□□□□ -0.67
CCDC78-201ENST00000293889 H0Y9J4 135 aa10.86□□□□□ -0.67
CCDC78-201ENST00000293889 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-201ENST00000293889 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
CCDC78-201ENST00000293889 Q9BRP9 147 aa10.85□□□□□ -0.67
CCDC78-201ENST00000293889 A0A087WVE0 104 aa10.84□□□□□ -0.67
CCDC78-201ENST00000293889 ZNF861PO60384 105 aa10.84□□□□□ -0.67
CCDC78-201ENST00000293889 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
CCDC78-201ENST00000293889 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
CCDC78-201ENST00000293889 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 ABCA13Q86UQ4 5058 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 ERC2-IT1O76042 136 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 CXCL6P80162 114 aa10.8□□□□□ -0.68
CCDC78-201ENST00000293889 Q6ZVQ6 151 aa10.79□□□□□ -0.68
CCDC78-201ENST00000293889 LINC01547P58512 204 aaPredicted RBP10.77□□□□□ -0.68
CCDC78-201ENST00000293889 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
CCDC78-201ENST00000293889 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
CCDC78-201ENST00000293889 TMEM258P61165 79 aa10.72□□□□□ -0.69
CCDC78-201ENST00000293889 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
CCDC78-201ENST00000293889 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-201ENST00000293889 A0A1B0GW54 56 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 SVIPQ8NHG7 77 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
CCDC78-201ENST00000293889 TRAV7A0A075B6U4 112 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
CCDC78-201ENST00000293889 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
CCDC78-201ENST00000293889 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
CCDC78-201ENST00000293889 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
CCDC78-201ENST00000293889 Q8N377 158 aa10.65□□□□□ -0.7
CCDC78-201ENST00000293889 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
CCDC78-201ENST00000293889 J3KT08 172 aa10.63□□□□□ -0.71
CCDC78-201ENST00000293889 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
CCDC78-201ENST00000293889 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 SPRR1BP22528 89 aa10.62□□□□□ -0.71
CCDC78-201ENST00000293889 KLKP1Q107X0 134 aa10.58□□□□□ -0.72
CCDC78-201ENST00000293889 LRP1Q07954 4544 aaKnown RBP10.57□□□□□ -0.72
CCDC78-201ENST00000293889 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
CCDC78-201ENST00000293889 NREPQ16612 68 aa10.55□□□□□ -0.72
CCDC78-201ENST00000293889 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
CCDC78-201ENST00000293889 A0A087X002 238 aa10.54□□□□□ -0.72
CCDC78-201ENST00000293889 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
CCDC78-201ENST00000293889 IGKV4-1P06312 121 aa10.53□□□□□ -0.72
CCDC78-201ENST00000293889 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.72
CCDC78-201ENST00000293889 IGLV9-49A0A0B4J1Y8 123 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 Q8NBF4 154 aa10.51□□□□□ -0.73
CCDC78-201ENST00000293889 KRTAP29-1A8MX34 341 aaPredicted RBP10.5□□□□□ -0.73
CCDC78-201ENST00000293889 H7BZZ5 65 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 KRTAP13-2Q52LG2 175 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
CCDC78-201ENST00000293889 BPY2O14599 106 aa10.48□□□□□ -0.73
CCDC78-201ENST00000293889 F8WEM9 126 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 NDUFC1O43677 76 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 OXTP01178 125 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 MOBPQ13875 183 aa10.47□□□□□ -0.73
CCDC78-201ENST00000293889 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-201ENST00000293889 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
CCDC78-201ENST00000293889 TYMSOSQ8TAI1 123 aa10.43□□□□□ -0.74
CCDC78-201ENST00000293889 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
CCDC78-201ENST00000293889 J3QL48 77 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms