RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
CPNE2-201ENST00000290776 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
CPNE2-201ENST00000290776 A0A096LNI7 61 aa13.35□□□□□ -0.27
CPNE2-201ENST00000290776 A0A087WSZ3 146 aa13.35□□□□□ -0.27
CPNE2-201ENST00000290776 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
CPNE2-201ENST00000290776 RPL37AP61513 92 aaKnown RBP13.31□□□□□ -0.28
CPNE2-201ENST00000290776 ZCCHC13Q8WW36 166 aaKnown RBP13.3□□□□□ -0.28
CPNE2-201ENST00000290776 PKIGQ9Y2B9 76 aa13.3□□□□□ -0.28
CPNE2-201ENST00000290776 C1orf64Q8NEQ6 169 aa13.3□□□□□ -0.28
CPNE2-201ENST00000290776 hDV103S1A0JD37 113 aa13.29□□□□□ -0.28
CPNE2-201ENST00000290776 STAB2Q8WWQ8 2551 aa13.28□□□□□ -0.28
CPNE2-201ENST00000290776 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.28
CPNE2-201ENST00000290776 UBE2AP49459 152 aa13.26□□□□□ -0.29
CPNE2-201ENST00000290776 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
CPNE2-201ENST00000290776 TENM2Q9NT68 2774 aa13.25□□□□□ -0.29
CPNE2-201ENST00000290776 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
CPNE2-201ENST00000290776 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
CPNE2-201ENST00000290776 KRTAP11-1Q8IUC1 163 aa13.23□□□□□ -0.29
CPNE2-201ENST00000290776 MGAM2Q2M2H8 2515 aa13.22□□□□□ -0.29
CPNE2-201ENST00000290776 PHF5AQ7RTV0 110 aaKnown RBP13.21□□□□□ -0.29
CPNE2-201ENST00000290776 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
CPNE2-201ENST00000290776 DNAH9Q9NYC9 4486 aa13.18□□□□□ -0.3
CPNE2-201ENST00000290776 LINC00208Q96KT6 92 aa13.18□□□□□ -0.3
CPNE2-201ENST00000290776 MP68P56378 58 aa13.17□□□□□ -0.3
CPNE2-201ENST00000290776 IGLV8-61A0A075B6I0 122 aa13.16□□□□□ -0.3
CPNE2-201ENST00000290776 K7EIL1 84 aa13.16□□□□□ -0.3
CPNE2-201ENST00000290776 PSPHP1O15172 72 aa13.14□□□□□ -0.31
CPNE2-201ENST00000290776 CNBPP62633 177 aaKnown RBP13.14□□□□□ -0.31
CPNE2-201ENST00000290776 CASC2Q6XLA1 102 aa13.12□□□□□ -0.31
CPNE2-201ENST00000290776 UBE2DNLQ8IWF7 75 aa13.12□□□□□ -0.31
CPNE2-201ENST00000290776 TRAV22A0A0B4J277 110 aa13.1□□□□□ -0.31
CPNE2-201ENST00000290776 KRTAP29-1A8MX34 341 aaPredicted RBP13.1□□□□□ -0.31
CPNE2-201ENST00000290776 NDUFB1O75438 58 aa13.09□□□□□ -0.31
CPNE2-201ENST00000290776 H0Y9P7 68 aa13.09□□□□□ -0.31
CPNE2-201ENST00000290776 CYP4F30PQ9H0H9 118 aa13.09□□□□□ -0.31
CPNE2-201ENST00000290776 Q1T7F1 81 aa13.08□□□□□ -0.32
CPNE2-201ENST00000290776 PRR15Q8IV56 129 aa13.08□□□□□ -0.32
CPNE2-201ENST00000290776 H0Y9J4 135 aa13.05□□□□□ -0.32
CPNE2-201ENST00000290776 DNAH7Q8WXX0 4024 aa13.04□□□□□ -0.32
CPNE2-201ENST00000290776 A8MWP4 228 aa13.04□□□□□ -0.32
CPNE2-201ENST00000290776 LINC00472Q9H8W2 130 aa13.03□□□□□ -0.32
CPNE2-201ENST00000290776 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
CPNE2-201ENST00000290776 C1orf195Q5TG92 126 aa13□□□□□ -0.33
CPNE2-201ENST00000290776 PANO1I0J062 215 aa12.99□□□□□ -0.33
CPNE2-201ENST00000290776 SPRR1BP22528 89 aa12.99□□□□□ -0.33
CPNE2-201ENST00000290776 A8MUN3 132 aa12.97□□□□□ -0.33
CPNE2-201ENST00000290776 C14orf177Q52M58 125 aa12.97□□□□□ -0.33
CPNE2-201ENST00000290776 IGLV9-49A0A0B4J1Y8 123 aa12.96□□□□□ -0.33
CPNE2-201ENST00000290776 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
CPNE2-201ENST00000290776 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
CPNE2-201ENST00000290776 MMP24-AS1A0A0U1RRL7 71 aa12.92□□□□□ -0.34
CPNE2-201ENST00000290776 H3BPC8 53 aa12.89□□□□□ -0.35
CPNE2-201ENST00000290776 SPANXA2-OT1Q8N9U9 137 aa12.89□□□□□ -0.35
CPNE2-201ENST00000290776 PCOTHQ58A44 107 aa12.87□□□□□ -0.35
CPNE2-201ENST00000290776 A8MU10 97 aa12.85□□□□□ -0.35
CPNE2-201ENST00000290776 KRTAP13-1Q8IUC0 172 aa12.85□□□□□ -0.35
CPNE2-201ENST00000290776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.84□□□□□ -0.35
CPNE2-201ENST00000290776 V9GYY9 64 aa12.83□□□□□ -0.36
CPNE2-201ENST00000290776 Q5VV11 94 aa12.82□□□□□ -0.36
CPNE2-201ENST00000290776 Q96NJ1 140 aa12.82□□□□□ -0.36
CPNE2-201ENST00000290776 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
CPNE2-201ENST00000290776 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
CPNE2-201ENST00000290776 Q8N9P0 234 aaPredicted RBP12.81□□□□□ -0.36
CPNE2-201ENST00000290776 NDUFS5O43920 106 aa12.79□□□□□ -0.36
CPNE2-201ENST00000290776 PRR15LQ9BU68 103 aa12.79□□□□□ -0.36
CPNE2-201ENST00000290776 IGHV6-1A0A0B4J1U7 121 aa12.78□□□□□ -0.36
CPNE2-201ENST00000290776 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
CPNE2-201ENST00000290776 CHKB-CPT1BH3BT56 60 aa12.77□□□□□ -0.36
CPNE2-201ENST00000290776 MOBPQ13875 183 aa12.77□□□□□ -0.36
CPNE2-201ENST00000290776 COA5Q86WW8 74 aa12.77□□□□□ -0.36
CPNE2-201ENST00000290776 MDFIQ99750 246 aa12.77□□□□□ -0.36
CPNE2-201ENST00000290776 FRAS1Q86XX4 4008 aa12.76□□□□□ -0.37
CPNE2-201ENST00000290776 Q6ZRN7 208 aaPredicted RBP12.75□□□□□ -0.37
CPNE2-201ENST00000290776 C8orf17Q9NRJ1 99 aa12.75□□□□□ -0.37
CPNE2-201ENST00000290776 CD164Q04900 197 aa12.74□□□□□ -0.37
CPNE2-201ENST00000290776 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
CPNE2-201ENST00000290776 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
CPNE2-201ENST00000290776 LIMD2Q9BT23 127 aa12.72□□□□□ -0.37
CPNE2-201ENST00000290776 DYNC2H1Q8NCM8 4307 aaKnown RBP12.7□□□□□ -0.38
CPNE2-201ENST00000290776 TP53AIP1Q9HCN2 124 aa12.68□□□□□ -0.38
CPNE2-201ENST00000290776 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
CPNE2-201ENST00000290776 ASB16-AS1Q495Z4 193 aa12.68□□□□□ -0.38
CPNE2-201ENST00000290776 A0A087X002 238 aa12.67□□□□□ -0.38
CPNE2-201ENST00000290776 A0A1B0GVX0 72 aa12.67□□□□□ -0.38
CPNE2-201ENST00000290776 NOTCH2NLQ7Z3S9 236 aa12.67□□□□□ -0.38
CPNE2-201ENST00000290776 PMAIP1Q13794 54 aa12.66□□□□□ -0.38
CPNE2-201ENST00000290776 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
CPNE2-201ENST00000290776 WWC2-AS2Q96NR7 200 aa12.66□□□□□ -0.38
CPNE2-201ENST00000290776 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
CPNE2-201ENST00000290776 SPAG11AQ6PDA7 123 aa12.62□□□□□ -0.39
CPNE2-201ENST00000290776 SPINK6Q6UWN8 80 aa12.62□□□□□ -0.39
CPNE2-201ENST00000290776 Q6ZR54 194 aa12.62□□□□□ -0.39
CPNE2-201ENST00000290776 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
CPNE2-201ENST00000290776 STARD9Q9P2P6 4700 aa12.61□□□□□ -0.39
CPNE2-201ENST00000290776 A0A087WTM6 91 aa12.6□□□□□ -0.39
CPNE2-201ENST00000290776 A6NED7 52 aa12.6□□□□□ -0.39
CPNE2-201ENST00000290776 MRPL34Q9BQ48 92 aaKnown RBP12.6□□□□□ -0.39
CPNE2-201ENST00000290776 ZNF706Q9Y5V0 76 aaPredicted RBP12.6□□□□□ -0.39
CPNE2-201ENST00000290776 SPTSSBQ8NFR3 76 aa12.6□□□□□ -0.39
CPNE2-201ENST00000290776 DNAH8Q96JB1 4490 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms