RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MT-ATP8P03928 68 aa5.49□□□□□ -1.53
PTPDC1-201ENST00000288976 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
PTPDC1-201ENST00000288976 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
PTPDC1-201ENST00000288976 DNAH11Q96DT5 4516 aa5.49□□□□□ -1.53
PTPDC1-201ENST00000288976 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.48□□□□□ -1.53
PTPDC1-201ENST00000288976 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
PTPDC1-201ENST00000288976 LITAFQ99732 161 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 TGP01266 2768 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 ATOX1O00244 68 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
PTPDC1-201ENST00000288976 C6orf48Q9UBA6 75 aa5.46□□□□□ -1.53
PTPDC1-201ENST00000288976 PKD1P98161 4303 aa5.46□□□□□ -1.54
PTPDC1-201ENST00000288976 ADAMTSL4-AS1Q5T5F5 129 aa5.46□□□□□ -1.54
PTPDC1-201ENST00000288976 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
PTPDC1-201ENST00000288976 EPM2AB3EWF7 344 aa5.45□□□□□ -1.54
PTPDC1-201ENST00000288976 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
PTPDC1-201ENST00000288976 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
PTPDC1-201ENST00000288976 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
PTPDC1-201ENST00000288976 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
PTPDC1-201ENST00000288976 PLA2G2DQ9UNK4 145 aa5.44□□□□□ -1.54
PTPDC1-201ENST00000288976 TNP2Q05952 138 aa5.43□□□□□ -1.54
PTPDC1-201ENST00000288976 Q6JHZ5 121 aa5.43□□□□□ -1.54
PTPDC1-201ENST00000288976 DNAH5Q8TE73 4624 aa5.42□□□□□ -1.54
PTPDC1-201ENST00000288976 TRBV7-6A0A0J9YX20 115 aa5.42□□□□□ -1.54
PTPDC1-201ENST00000288976 NDUFC2O95298 119 aa5.42□□□□□ -1.54
PTPDC1-201ENST00000288976 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
PTPDC1-201ENST00000288976 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
PTPDC1-201ENST00000288976 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
PTPDC1-201ENST00000288976 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
PTPDC1-201ENST00000288976 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
PTPDC1-201ENST00000288976 HCG22E2RYF7 251 aa5.4□□□□□ -1.54
PTPDC1-201ENST00000288976 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
PTPDC1-201ENST00000288976 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
PTPDC1-201ENST00000288976 KMT2CQ8NEZ4 4911 aaKnown RBP5.39□□□□□ -1.55
PTPDC1-201ENST00000288976 Q96NJ1 140 aa5.39□□□□□ -1.55
PTPDC1-201ENST00000288976 A0A087WVE0 104 aa5.38□□□□□ -1.55
PTPDC1-201ENST00000288976 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 M0R2T5 61 aa5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 SOSTDC1Q6X4U4 206 aa5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 LINC00528Q8N1L1 170 aa5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
PTPDC1-201ENST00000288976 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 RYR3Q15413 4870 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 VPREB1P12018 145 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 Q6ZSA8 131 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 A6NED7 52 aa5.35□□□□□ -1.55
PTPDC1-201ENST00000288976 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
PTPDC1-201ENST00000288976 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.56
PTPDC1-201ENST00000288976 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 IGLV6-57P01721 117 aa5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 BCE1O60756 84 aa5.32□□□□□ -1.56
PTPDC1-201ENST00000288976 SERTAD4-AS1Q5TG53 156 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 H0Y9P7 68 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 LINC00313P59037 77 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 KRTAP7-1Q8IUC3 87 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 Q8NDZ9 215 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
PTPDC1-201ENST00000288976 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 PRO0461Q9UI25 63 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 KRTAP10-1P60331 282 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 Q8NBF4 154 aa5.3□□□□□ -1.56
PTPDC1-201ENST00000288976 J3KT08 172 aa5.29□□□□□ -1.56
PTPDC1-201ENST00000288976 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
PTPDC1-201ENST00000288976 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
PTPDC1-201ENST00000288976 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
PTPDC1-201ENST00000288976 Q6ZRX8 168 aa5.28□□□□□ -1.56
PTPDC1-201ENST00000288976 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
PTPDC1-201ENST00000288976 PANO1I0J062 215 aa5.28□□□□□ -1.56
PTPDC1-201ENST00000288976 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
PTPDC1-201ENST00000288976 ZNF861PO60384 105 aa5.27□□□□□ -1.57
PTPDC1-201ENST00000288976 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
PTPDC1-201ENST00000288976 SPRR1AP35321 89 aa5.26□□□□□ -1.57
PTPDC1-201ENST00000288976 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
PTPDC1-201ENST00000288976 PKHD1P08F94 4074 aa5.25□□□□□ -1.57
PTPDC1-201ENST00000288976 PRR26Q8N8Z3 221 aa5.25□□□□□ -1.57
PTPDC1-201ENST00000288976 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
PTPDC1-201ENST00000288976 UQCRQO14949 82 aa5.24□□□□□ -1.57
PTPDC1-201ENST00000288976 DSCR10P59022 87 aa5.24□□□□□ -1.57
PTPDC1-201ENST00000288976 KRTAP4-16G5E9R7 235 aaPredicted RBP5.23□□□□□ -1.57
PTPDC1-201ENST00000288976 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
PTPDC1-201ENST00000288976 ELOF1P60002 83 aaKnown RBP5.23□□□□□ -1.57
PTPDC1-201ENST00000288976 TRBV7-7A0A0K0K1E9 115 aa5.22□□□□□ -1.57
PTPDC1-201ENST00000288976 IGLV7-43P04211 117 aa5.21□□□□□ -1.57
PTPDC1-201ENST00000288976 SMIM29Q86T20 159 aa5.21□□□□□ -1.57
PTPDC1-201ENST00000288976 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
PTPDC1-201ENST00000288976 PSPHP1O15172 72 aa5.2□□□□□ -1.58
PTPDC1-201ENST00000288976 KRTAP13-1Q8IUC0 172 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms