RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 MUSTN1Q8IVN3 82 aa7.59□□□□□ -1.19
TPM1-202ENST00000288398 DLEU1O43261 78 aa7.58□□□□□ -1.2
TPM1-202ENST00000288398 SPATA45Q537H7 98 aa7.58□□□□□ -1.2
TPM1-202ENST00000288398 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
TPM1-202ENST00000288398 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
TPM1-202ENST00000288398 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
TPM1-202ENST00000288398 HSBP1L1C9JCN9 74 aa7.57□□□□□ -1.2
TPM1-202ENST00000288398 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
TPM1-202ENST00000288398 COX6B2Q6YFQ2 88 aa7.57□□□□□ -1.2
TPM1-202ENST00000288398 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 M0R2T5 61 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 MT1HP80294 61 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 PAM16Q9Y3D7 125 aa7.56□□□□□ -1.2
TPM1-202ENST00000288398 A0A0G2JQZ4 141 aa7.55□□□□□ -1.2
TPM1-202ENST00000288398 COX8AP10176 69 aa7.55□□□□□ -1.2
TPM1-202ENST00000288398 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
TPM1-202ENST00000288398 PCP2Q8IVA1 136 aa7.55□□□□□ -1.2
TPM1-202ENST00000288398 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
TPM1-202ENST00000288398 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.21
TPM1-202ENST00000288398 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
TPM1-202ENST00000288398 Q6JHZ5 121 aa7.51□□□□□ -1.21
TPM1-202ENST00000288398 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
TPM1-202ENST00000288398 HIGD1BQ9P298 99 aa7.5□□□□□ -1.21
TPM1-202ENST00000288398 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
TPM1-202ENST00000288398 LINC00575Q6W349 94 aa7.49□□□□□ -1.21
TPM1-202ENST00000288398 Q6ZQY7 126 aa7.49□□□□□ -1.21
TPM1-202ENST00000288398 C14orf144Q96I85 54 aa7.49□□□□□ -1.21
TPM1-202ENST00000288398 CLEC2BQ92478 149 aa7.48□□□□□ -1.21
TPM1-202ENST00000288398 C2orf91Q6ZV80 131 aa7.46□□□□□ -1.22
TPM1-202ENST00000288398 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
TPM1-202ENST00000288398 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
TPM1-202ENST00000288398 SNHG12Q9BXW3 62 aa7.45□□□□□ -1.22
TPM1-202ENST00000288398 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
TPM1-202ENST00000288398 OCIAD2Q56VL3 154 aa7.44□□□□□ -1.22
TPM1-202ENST00000288398 M0R143 59 aa7.43□□□□□ -1.22
TPM1-202ENST00000288398 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
TPM1-202ENST00000288398 Q6Q795 121 aa7.43□□□□□ -1.22
TPM1-202ENST00000288398 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
TPM1-202ENST00000288398 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.43□□□□□ -1.22
TPM1-202ENST00000288398 OBSCN-AS1Q96MR7 158 aa7.43□□□□□ -1.22
TPM1-202ENST00000288398 SNCGO76070 127 aa7.42□□□□□ -1.22
TPM1-202ENST00000288398 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
TPM1-202ENST00000288398 PPDPFLQ8WWR9 84 aa7.42□□□□□ -1.22
TPM1-202ENST00000288398 LST1O00453 97 aa7.41□□□□□ -1.22
TPM1-202ENST00000288398 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
TPM1-202ENST00000288398 GHRHP01286 108 aa7.39□□□□□ -1.23
TPM1-202ENST00000288398 HSD52Q0P140 79 aa7.39□□□□□ -1.23
TPM1-202ENST00000288398 SS18L2Q9UHA2 77 aa7.39□□□□□ -1.23
TPM1-202ENST00000288398 Q75L30 129 aa7.38□□□□□ -1.23
TPM1-202ENST00000288398 H3BUT2 72 aa7.36□□□□□ -1.23
TPM1-202ENST00000288398 Q96NJ1 140 aa7.36□□□□□ -1.23
TPM1-202ENST00000288398 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
TPM1-202ENST00000288398 COL5A1-AS1Q5SY13 56 aa7.33□□□□□ -1.24
TPM1-202ENST00000288398 CEND1Q8N111 149 aa7.33□□□□□ -1.24
TPM1-202ENST00000288398 TRBV20-1A0A075B6N2 111 aa7.31□□□□□ -1.24
TPM1-202ENST00000288398 H0YGX0 51 aa7.31□□□□□ -1.24
TPM1-202ENST00000288398 TEN1Q86WV5 123 aa7.3□□□□□ -1.24
TPM1-202ENST00000288398 FXYD2P54710 66 aa7.28□□□□□ -1.24
TPM1-202ENST00000288398 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
TPM1-202ENST00000288398 A0A087WSZ3 146 aa7.27□□□□□ -1.25
TPM1-202ENST00000288398 TAX1BP3O14907 124 aa7.26□□□□□ -1.25
TPM1-202ENST00000288398 CFC1P0CG37 223 aa7.26□□□□□ -1.25
TPM1-202ENST00000288398 FABP2P12104 132 aa7.26□□□□□ -1.25
TPM1-202ENST00000288398 FLGP20930 4061 aaPredicted RBP7.25□□□□□ -1.25
TPM1-202ENST00000288398 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
TPM1-202ENST00000288398 H3BMG7 143 aa7.25□□□□□ -1.25
TPM1-202ENST00000288398 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
TPM1-202ENST00000288398 C20orf166-AS1Q96NR2 134 aa7.25□□□□□ -1.25
TPM1-202ENST00000288398 SIGMAR1Q99720 223 aa7.25□□□□□ -1.25
TPM1-202ENST00000288398 A8MUU9 505 aa7.23□□□□□ -1.25
TPM1-202ENST00000288398 BATFQ16520 125 aa7.23□□□□□ -1.25
TPM1-202ENST00000288398 A0A1B0GX51 115 aa7.22□□□□□ -1.25
TPM1-202ENST00000288398 C9orf118A6NHY6 69 aa7.22□□□□□ -1.25
TPM1-202ENST00000288398 DSCR10P59022 87 aa7.21□□□□□ -1.26
TPM1-202ENST00000288398 FAM218AQ96MZ4 157 aa7.21□□□□□ -1.26
TPM1-202ENST00000288398 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
TPM1-202ENST00000288398 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
TPM1-202ENST00000288398 A0A1B0GV90 55 aa7.19□□□□□ -1.26
TPM1-202ENST00000288398 DNAL4O96015 105 aa7.19□□□□□ -1.26
TPM1-202ENST00000288398 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
TPM1-202ENST00000288398 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
TPM1-202ENST00000288398 LINC00313P59037 77 aa7.18□□□□□ -1.26
TPM1-202ENST00000288398 IGKV4-1P06312 121 aa7.17□□□□□ -1.26
TPM1-202ENST00000288398 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
TPM1-202ENST00000288398 H3BQ85 93 aa7.16□□□□□ -1.26
TPM1-202ENST00000288398 A0A1B0GV72 72 aa7.15□□□□□ -1.26
TPM1-202ENST00000288398 ORMDL1Q9P0S3 153 aa7.15□□□□□ -1.26
TPM1-202ENST00000288398 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
TPM1-202ENST00000288398 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
TPM1-202ENST00000288398 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
TPM1-202ENST00000288398 PSMB2P49721 201 aa7.14□□□□□ -1.27
TPM1-202ENST00000288398 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
TPM1-202ENST00000288398 K7ERJ3 54 aa7.13□□□□□ -1.27
TPM1-202ENST00000288398 TRIAP1O43715 76 aa7.13□□□□□ -1.27
TPM1-202ENST00000288398 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
TPM1-202ENST00000288398 TRACP01848 142 aa7.11□□□□□ -1.27
TPM1-202ENST00000288398 COX6CP09669 75 aa7.11□□□□□ -1.27
TPM1-202ENST00000288398 TMEM256-PLSCR3K7ERE1 68 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms