RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 A0A0D9SG42 100 aa12.44□□□□□ -0.42
USP25-202ENST00000285681 DSPP15924 2871 aaKnown RBP12.42□□□□□ -0.42
USP25-202ENST00000285681 IGSF10Q6WRI0 2623 aa12.42□□□□□ -0.42
USP25-202ENST00000285681 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.43
USP25-202ENST00000285681 LCE6AA0A183 80 aa12.38□□□□□ -0.43
USP25-202ENST00000285681 SPRR1BP22528 89 aa12.38□□□□□ -0.43
USP25-202ENST00000285681 GCN1Q92616 2671 aaKnown RBP12.37□□□□□ -0.43
USP25-202ENST00000285681 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
USP25-202ENST00000285681 HRES1P13985 223 aa12.35□□□□□ -0.43
USP25-202ENST00000285681 MMP24-AS1A0A0U1RRL7 71 aa12.35□□□□□ -0.43
USP25-202ENST00000285681 KRTAP26-1Q6PEX3 210 aa12.35□□□□□ -0.43
USP25-202ENST00000285681 A0A0C4DFX4 3053 aa12.35□□□□□ -0.43
USP25-202ENST00000285681 ZCCHC13Q8WW36 166 aaKnown RBP12.34□□□□□ -0.43
USP25-202ENST00000285681 M0R2T5 61 aa12.32□□□□□ -0.44
USP25-202ENST00000285681 CDC42SE1Q9NRR8 79 aa12.32□□□□□ -0.44
USP25-202ENST00000285681 KRTAP10-1P60331 282 aa12.3□□□□□ -0.44
USP25-202ENST00000285681 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
USP25-202ENST00000285681 Q5VSD8 79 aa12.29□□□□□ -0.44
USP25-202ENST00000285681 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.45
USP25-202ENST00000285681 KRTAP10-2P60368 255 aa12.27□□□□□ -0.45
USP25-202ENST00000285681 LINC00472Q9H8W2 130 aa12.25□□□□□ -0.45
USP25-202ENST00000285681 BRCA2P51587 3418 aa12.24□□□□□ -0.45
USP25-202ENST00000285681 Q8N9P0 234 aaPredicted RBP12.23□□□□□ -0.45
USP25-202ENST00000285681 PRUNE2Q8WUY3 3088 aa12.22□□□□□ -0.45
USP25-202ENST00000285681 CSAG1Q6PB30 78 aa12.2□□□□□ -0.46
USP25-202ENST00000285681 A0A1B0GU33 70 aa12.19□□□□□ -0.46
USP25-202ENST00000285681 LAMA2P24043 3122 aaKnown RBP12.19□□□□□ -0.46
USP25-202ENST00000285681 CAMK2N1Q7Z7J9 78 aa12.18□□□□□ -0.46
USP25-202ENST00000285681 FLG2Q5D862 2391 aaPredicted RBP12.16□□□□□ -0.46
USP25-202ENST00000285681 SEC61BP60468 96 aaKnown RBP12.15□□□□□ -0.46
USP25-202ENST00000285681 Q5W150 140 aa12.15□□□□□ -0.46
USP25-202ENST00000285681 SPINK7P58062 85 aa12.14□□□□□ -0.47
USP25-202ENST00000285681 TRIOO75962 3097 aa12.14□□□□□ -0.47
USP25-202ENST00000285681 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
USP25-202ENST00000285681 Q1T7F1 81 aa12.13□□□□□ -0.47
USP25-202ENST00000285681 Q6ZR54 194 aa12.13□□□□□ -0.47
USP25-202ENST00000285681 S4R3F8 94 aa12.12□□□□□ -0.47
USP25-202ENST00000285681 KTN1-AS1Q86SY8 53 aa12.1□□□□□ -0.47
USP25-202ENST00000285681 NSD1Q96L73 2696 aaPredicted RBP12.09□□□□□ -0.47
USP25-202ENST00000285681 PANO1I0J062 215 aa12.07□□□□□ -0.48
USP25-202ENST00000285681 LINC00483Q53H64 154 aa12.07□□□□□ -0.48
USP25-202ENST00000285681 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
USP25-202ENST00000285681 LCA10Q71F78 164 aa12.04□□□□□ -0.48
USP25-202ENST00000285681 ITPR2Q14571 2701 aa12.04□□□□□ -0.48
USP25-202ENST00000285681 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
USP25-202ENST00000285681 FRYQ5TBA9 3013 aa12□□□□□ -0.49
USP25-202ENST00000285681 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
USP25-202ENST00000285681 LINC01558Q9Y6Z2 57 aa11.99□□□□□ -0.49
USP25-202ENST00000285681 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
USP25-202ENST00000285681 Q75L30 129 aa11.98□□□□□ -0.49
USP25-202ENST00000285681 UNC80Q8N2C7 3258 aa11.97□□□□□ -0.49
USP25-202ENST00000285681 DMAC1Q96GE9 116 aa11.96□□□□□ -0.49
USP25-202ENST00000285681 FP248Q71RG6 208 aaPredicted RBP11.96□□□□□ -0.49
USP25-202ENST00000285681 VPS13AQ96RL7 3174 aa11.96□□□□□ -0.5
USP25-202ENST00000285681 FLNCQ14315 2725 aa11.93□□□□□ -0.5
USP25-202ENST00000285681 R4GN34 69 aa11.93□□□□□ -0.5
USP25-202ENST00000285681 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
USP25-202ENST00000285681 A0A087X002 238 aa11.89□□□□□ -0.51
USP25-202ENST00000285681 OXTP01178 125 aa11.85□□□□□ -0.51
USP25-202ENST00000285681 LUZP6Q538Z0 58 aa11.85□□□□□ -0.51
USP25-202ENST00000285681 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
USP25-202ENST00000285681 TACC2O95359 2948 aa11.84□□□□□ -0.51
USP25-202ENST00000285681 Q6ZRN7 208 aaPredicted RBP11.83□□□□□ -0.52
USP25-202ENST00000285681 ATMQ13315 3056 aa11.75□□□□□ -0.53
USP25-202ENST00000285681 HIVEP1P15822 2718 aa11.74□□□□□ -0.53
USP25-202ENST00000285681 REV3LO60673 3130 aa11.73□□□□□ -0.53
USP25-202ENST00000285681 KRTAP11-1Q8IUC1 163 aa11.73□□□□□ -0.53
USP25-202ENST00000285681 KRTAP29-1A8MX34 341 aaPredicted RBP11.72□□□□□ -0.53
USP25-202ENST00000285681 CDH23Q9H251 3354 aa11.71□□□□□ -0.53
USP25-202ENST00000285681 Q5VV11 94 aa11.71□□□□□ -0.53
USP25-202ENST00000285681 COL12A1Q99715 3063 aa11.71□□□□□ -0.53
USP25-202ENST00000285681 KRTAP21-3Q3LHN1 58 aa11.7□□□□□ -0.54
USP25-202ENST00000285681 Q5XG85 94 aa11.68□□□□□ -0.54
USP25-202ENST00000285681 M0QZ58 72 aa11.68□□□□□ -0.54
USP25-202ENST00000285681 TENM4Q6N022 2769 aa11.67□□□□□ -0.54
USP25-202ENST00000285681 FRYLO94915 3013 aa11.67□□□□□ -0.54
USP25-202ENST00000285681 RPS29P62273 56 aaKnown RBP11.65□□□□□ -0.54
USP25-202ENST00000285681 UTP20O75691 2785 aaKnown RBP11.65□□□□□ -0.54
USP25-202ENST00000285681 RPL37P61927 97 aaKnown RBP11.65□□□□□ -0.54
USP25-202ENST00000285681 ASB16-AS1Q495Z4 193 aa11.64□□□□□ -0.55
USP25-202ENST00000285681 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
USP25-202ENST00000285681 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
USP25-202ENST00000285681 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
USP25-202ENST00000285681 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
USP25-202ENST00000285681 H1FX-AS1Q4G0G2 97 aa11.59□□□□□ -0.55
USP25-202ENST00000285681 KALRNO60229 2985 aa11.59□□□□□ -0.55
USP25-202ENST00000285681 CELSR3Q9NYQ7 3312 aa11.57□□□□□ -0.56
USP25-202ENST00000285681 ADM2Q7Z4H4 148 aa11.55□□□□□ -0.56
USP25-202ENST00000285681 PRAC1Q96KF2 57 aa11.53□□□□□ -0.56
USP25-202ENST00000285681 KRTAP13-2Q52LG2 175 aa11.53□□□□□ -0.56
USP25-202ENST00000285681 FREM2Q5SZK8 3169 aa11.52□□□□□ -0.56
USP25-202ENST00000285681 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.575e-6■■■■■ 32.2
USP25-202ENST00000285681 KRTAP13-1Q8IUC0 172 aa11.51□□□□□ -0.57
USP25-202ENST00000285681 LAMA1P25391 3075 aa11.51□□□□□ -0.57
USP25-202ENST00000285681 SZT2Q5T011 3432 aa11.48□□□□□ -0.57
USP25-202ENST00000285681 PLAC4Q8WY50 150 aa11.48□□□□□ -0.57
USP25-202ENST00000285681 ADGRG4Q8IZF6 3080 aa11.47□□□□□ -0.57
USP25-202ENST00000285681 ROMO1P60602 79 aa11.46□□□□□ -0.58
USP25-202ENST00000285681 APCP25054 2843 aa11.46□□□□□ -0.58
USP25-202ENST00000285681 LRBAP50851 2863 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms