RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
USP43-201ENST00000285199 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
USP43-201ENST00000285199 F8WDY8 70 aa10.15□□□□□ -0.79
USP43-201ENST00000285199 WIPF1O43516 503 aa10.15□□□□□ -0.79
USP43-201ENST00000285199 COA5Q86WW8 74 aa10.15□□□□□ -0.79
USP43-201ENST00000285199 DMBT1Q9UGM3 2413 aaPredicted RBP10.14□□□□□ -0.79
USP43-201ENST00000285199 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
USP43-201ENST00000285199 DSCR10P59022 87 aa10.12□□□□□ -0.79
USP43-201ENST00000285199 IGKV2D-30A0A075B6S6 120 aa10.11□□□□□ -0.79
USP43-201ENST00000285199 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
USP43-201ENST00000285199 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
USP43-201ENST00000285199 H3BNG1 76 aa10.11□□□□□ -0.79
USP43-201ENST00000285199 A0A1B0GW54 56 aa10.1□□□□□ -0.79
USP43-201ENST00000285199 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
USP43-201ENST00000285199 ZNF706Q9Y5V0 76 aaPredicted RBP10.1□□□□□ -0.79
USP43-201ENST00000285199 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
USP43-201ENST00000285199 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
USP43-201ENST00000285199 LY6G6CO95867 125 aa10.09□□□□□ -0.79
USP43-201ENST00000285199 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
USP43-201ENST00000285199 A8MWP4 228 aa10.08□□□□□ -0.8
USP43-201ENST00000285199 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
USP43-201ENST00000285199 C16orf90A8MZG2 172 aa10.07□□□□□ -0.8
USP43-201ENST00000285199 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
USP43-201ENST00000285199 PDZD2O15018 2839 aa10.03□□□□□ -0.8
USP43-201ENST00000285199 A0A1B0GU69 56 aa10.01□□□□□ -0.81
USP43-201ENST00000285199 IGLV5-52A0A0A0MRZ9 124 aa10□□□□□ -0.81
USP43-201ENST00000285199 MDFIQ99750 246 aa9.99□□□□□ -0.81
USP43-201ENST00000285199 TP53AIP1Q9HCN2 124 aa9.99□□□□□ -0.81
USP43-201ENST00000285199 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
USP43-201ENST00000285199 SPACA4Q8TDM5 124 aa9.98□□□□□ -0.81
USP43-201ENST00000285199 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
USP43-201ENST00000285199 H3BPC8 53 aa9.97□□□□□ -0.81
USP43-201ENST00000285199 ATP11AUNQ6ZP68 121 aa9.97□□□□□ -0.81
USP43-201ENST00000285199 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
USP43-201ENST00000285199 ACYP2P14621 99 aa9.93□□□□□ -0.82
USP43-201ENST00000285199 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
USP43-201ENST00000285199 SPRR4Q96PI1 79 aa9.92□□□□□ -0.82
USP43-201ENST00000285199 Q1T7F1 81 aa9.91□□□□□ -0.82
USP43-201ENST00000285199 TLX1NBP0CAT3 122 aa9.91□□□□□ -0.82
USP43-201ENST00000285199 VWFP04275 2813 aa9.91□□□□□ -0.82
USP43-201ENST00000285199 CSMD2Q7Z408 3487 aa9.9□□□□□ -0.82
USP43-201ENST00000285199 C7orf65Q6ZTY9 151 aa9.89□□□□□ -0.83
USP43-201ENST00000285199 CYP4F30PQ9H0H9 118 aa9.89□□□□□ -0.83
USP43-201ENST00000285199 FBN1P35555 2871 aaKnown RBP9.89□□□□□ -0.83
USP43-201ENST00000285199 CD164Q04900 197 aa9.87□□□□□ -0.83
USP43-201ENST00000285199 NBDYA0A0U1RRE5 68 aa9.86□□□□□ -0.83
USP43-201ENST00000285199 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
USP43-201ENST00000285199 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
USP43-201ENST00000285199 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
USP43-201ENST00000285199 PLA2G2DQ9UNK4 145 aa9.85□□□□□ -0.83
USP43-201ENST00000285199 NUPR2A6NF83 97 aa9.85□□□□□ -0.83
USP43-201ENST00000285199 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
USP43-201ENST00000285199 K7EIL1 84 aa9.85□□□□□ -0.83
USP43-201ENST00000285199 K7ERS5 55 aa9.84□□□□□ -0.83
USP43-201ENST00000285199 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
USP43-201ENST00000285199 LINC00313P59037 77 aa9.83□□□□□ -0.84
USP43-201ENST00000285199 RTL8CO15255 209 aa9.82□□□□□ -0.84
USP43-201ENST00000285199 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
USP43-201ENST00000285199 A8MU10 97 aa9.82□□□□□ -0.84
USP43-201ENST00000285199 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
USP43-201ENST00000285199 Q5VV11 94 aa9.82□□□□□ -0.84
USP43-201ENST00000285199 C1orf134Q5TEV5 83 aa9.81□□□□□ -0.84
USP43-201ENST00000285199 C9orf163Q8N9P6 203 aa9.8□□□□□ -0.84
USP43-201ENST00000285199 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
USP43-201ENST00000285199 TENM4Q6N022 2769 aa9.78□□□□□ -0.84
USP43-201ENST00000285199 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
USP43-201ENST00000285199 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
USP43-201ENST00000285199 SPRR1AP35321 89 aa9.77□□□□□ -0.85
USP43-201ENST00000285199 PRAC1Q96KF2 57 aa9.77□□□□□ -0.85
USP43-201ENST00000285199 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.85
USP43-201ENST00000285199 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
USP43-201ENST00000285199 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
USP43-201ENST00000285199 IGLV5-37A0A075B6J1 123 aa9.75□□□□□ -0.85
USP43-201ENST00000285199 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
USP43-201ENST00000285199 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
USP43-201ENST00000285199 SPINK7P58062 85 aa9.71□□□□□ -0.85
USP43-201ENST00000285199 TNP2Q05952 138 aa9.71□□□□□ -0.86
USP43-201ENST00000285199 Q96NJ1 140 aa9.71□□□□□ -0.86
USP43-201ENST00000285199 IGLV7-46A0A075B6I9 117 aa9.71□□□□□ -0.86
USP43-201ENST00000285199 KRTAP1-5Q9BYS1 174 aa9.71□□□□□ -0.86
USP43-201ENST00000285199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.86
USP43-201ENST00000285199 UQCR11O14957 56 aa9.7□□□□□ -0.86
USP43-201ENST00000285199 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
USP43-201ENST00000285199 ZNF861PO60384 105 aa9.69□□□□□ -0.86
USP43-201ENST00000285199 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
USP43-201ENST00000285199 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
USP43-201ENST00000285199 Q8N1X5 172 aa9.66□□□□□ -0.86
USP43-201ENST00000285199 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
USP43-201ENST00000285199 HRES1P13985 223 aa9.65□□□□□ -0.87
USP43-201ENST00000285199 LCA10Q71F78 164 aa9.64□□□□□ -0.87
USP43-201ENST00000285199 A0A087WTM6 91 aa9.63□□□□□ -0.87
USP43-201ENST00000285199 Q75L30 129 aa9.63□□□□□ -0.87
USP43-201ENST00000285199 ZCCHC13Q8WW36 166 aaKnown RBP9.62□□□□□ -0.87
USP43-201ENST00000285199 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
USP43-201ENST00000285199 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
USP43-201ENST00000285199 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
USP43-201ENST00000285199 ZFHX3Q15911 3703 aa9.59□□□□□ -0.87
USP43-201ENST00000285199 PANO1I0J062 215 aa9.58□□□□□ -0.88
USP43-201ENST00000285199 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
USP43-201ENST00000285199 APLNQ9ULZ1 77 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms