RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 H3BUT2 72 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 M0R2N4 97 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 M0R3E3 92 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 UBE2D3P61077 147 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 UBE2D2P62837 147 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 MOBPQ13875 183 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 C18orf32Q8TCD1 76 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 TIMM21Q9BVV7 248 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 LENEPQ9Y5L5 61 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 KMT2AQ03164 3969 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 BCE1O60756 84 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 HRES1P13985 223 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
CD44-202ENST00000278385 Q6ZTI0 123 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 IFI27L1Q96BM0 104 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 MANBALQ9NQG1 85 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 NBEAL2Q6ZNJ1 2754 aa2.6□□□□□ -1.99
CD44-202ENST00000278385 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 EPPK1P58107 5090 aaKnown RBP2.59□□□□□ -1.99
CD44-202ENST00000278385 TRGV2A0A075B6R0 118 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -1.99
CD44-202ENST00000278385 TRGV1A0A0A0MS02 117 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 TRBV10-1A0A0K0K1A3 114 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 F2Z2F3 143 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 RTL8CO15255 209 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 SPINK4O60575 86 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -1.99
CD44-202ENST00000278385 SERF2P84101 59 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 KLKP1Q107X0 134 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 PRO1854Q9UHT4 67 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 DNAH10Q8IVF4 4471 aa2.59□□□□□ -1.99
CD44-202ENST00000278385 TRBV7-3A0A075B6L6 115 aa2.58□□□□□ -2
CD44-202ENST00000278385 TRAV23DV6A0A075B6W5 121 aa2.58□□□□□ -2
CD44-202ENST00000278385 TRAV21A0A0B4J279 112 aa2.58□□□□□ -2
CD44-202ENST00000278385 A0A0J9YY99 117 aa2.58□□□□□ -2
CD44-202ENST00000278385 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
CD44-202ENST00000278385 PMCHL1Q16048 86 aa2.58□□□□□ -2
CD44-202ENST00000278385 CSAG1Q6PB30 78 aa2.58□□□□□ -2
CD44-202ENST00000278385 TMEM167BQ9NRX6 74 aa2.58□□□□□ -2
CD44-202ENST00000278385 PRO0255Q9UI72 69 aa2.58□□□□□ -2
CD44-202ENST00000278385 A0A096LPF7 62 aa2.57□□□□□ -2
CD44-202ENST00000278385 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
CD44-202ENST00000278385 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
CD44-202ENST00000278385 TEX49A0A1B0GTD5 131 aa2.57□□□□□ -2
CD44-202ENST00000278385 KRTAP1-4P0C5Y4 121 aa2.57□□□□□ -2
CD44-202ENST00000278385 UBE2D1P51668 147 aa2.57□□□□□ -2
CD44-202ENST00000278385 PRR9Q5T870 116 aa2.57□□□□□ -2
CD44-202ENST00000278385 CFAP126Q5VTH2 177 aa2.57□□□□□ -2
CD44-202ENST00000278385 Q5VV11 94 aa2.57□□□□□ -2
CD44-202ENST00000278385 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
CD44-202ENST00000278385 FXYD6-FXYD2A0A087WZ82 144 aa2.56□□□□□ -2
CD44-202ENST00000278385 CTXND1A0A1B0GTU2 59 aa2.56□□□□□ -2
CD44-202ENST00000278385 ACYP1P07311 99 aa2.56□□□□□ -2
CD44-202ENST00000278385 ARL14EPLP0DKL9 152 aa2.56□□□□□ -2
CD44-202ENST00000278385 GCHFRP30047 84 aa2.56□□□□□ -2
CD44-202ENST00000278385 ELOBQ15370 118 aa2.56□□□□□ -2
CD44-202ENST00000278385 TVP23CQ96ET8 276 aa2.56□□□□□ -2
CD44-202ENST00000278385 DMAC1Q96GE9 116 aa2.56□□□□□ -2
CD44-202ENST00000278385 DNAH17Q9UFH2 4485 aa2.56□□□□□ -2
CD44-202ENST00000278385 DNAH2Q9P225 4427 aa2.56□□□□□ -2
CD44-202ENST00000278385 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
CD44-202ENST00000278385 LINC00643Q86TS7 51 aa2.55□□□□□ -2
CD44-202ENST00000278385 Q8N9L7 120 aa2.55□□□□□ -2
CD44-202ENST00000278385 TXNDC17Q9BRA2 123 aa2.55□□□□□ -2
CD44-202ENST00000278385 LIMD2Q9BT23 127 aa2.55□□□□□ -2
CD44-202ENST00000278385 ORMDL1Q9P0S3 153 aa2.55□□□□□ -2
CD44-202ENST00000278385 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
CD44-202ENST00000278385 A0A087WWC5 75 aa2.54□□□□□ -2
CD44-202ENST00000278385 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
CD44-202ENST00000278385 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
CD44-202ENST00000278385 UMAD1C9J7I0 102 aa2.54□□□□□ -2
CD44-202ENST00000278385 COX6CP09669 75 aa2.54□□□□□ -2
CD44-202ENST00000278385 SFTA3P0C7M3 94 aa2.54□□□□□ -2
CD44-202ENST00000278385 TMEM170BQ5T4T1 132 aa2.54□□□□□ -2
CD44-202ENST00000278385 ARL2-SNX15V9GYD0 113 aa2.54□□□□□ -2
CD44-202ENST00000278385 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
CD44-202ENST00000278385 TRBV25-1A0A075B6N4 114 aa2.53□□□□□ -2
CD44-202ENST00000278385 TRBV6-1A0A0K0K1D8 114 aa2.53□□□□□ -2
CD44-202ENST00000278385 CHKB-CPT1BH3BT56 60 aa2.53□□□□□ -2
CD44-202ENST00000278385 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
CD44-202ENST00000278385 LINC00315P59091 139 aa2.53□□□□□ -2
CD44-202ENST00000278385 TPRXLQ17RH7 258 aa2.53□□□□□ -2
CD44-202ENST00000278385 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
CD44-202ENST00000278385 CDC42SE2Q9NRR3 84 aa2.53□□□□□ -2
CD44-202ENST00000278385 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 C7orf77A4D0Y5 90 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 CRIP1P50238 77 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 LELP1Q5T871 98 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
CD44-202ENST00000278385 ANAPC11Q9NYG5 84 aa2.52□□□□□ -2.01
CD44-202ENST00000278385 HERC2O95714 4834 aa2.51□□□□□ -2.01
CD44-202ENST00000278385 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
CD44-202ENST00000278385 A0A087WTM6 91 aa2.51□□□□□ -2.01
CD44-202ENST00000278385 TRBV6-8A0A0A6YYG3 113 aa2.51□□□□□ -2.01
CD44-202ENST00000278385 IGHV3-30P01768 117 aa2.51□□□□□ -2.01
CD44-202ENST00000278385 ARMS2P0C7Q2 107 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 471 ms