RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 COL27A1Q8IZC6 1860 aaPredicted RBP3.91□□□□□ -1.78
LIN7C-201ENST00000278193 RPL39LQ96EH5 51 aaKnown RBP3.91□□□□□ -1.78
LIN7C-201ENST00000278193 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.78
LIN7C-201ENST00000278193 KLK9Q2XQG4 91 aa3.9□□□□□ -1.79
LIN7C-201ENST00000278193 PSORS1C2Q9UIG4 136 aa3.89□□□□□ -1.79
LIN7C-201ENST00000278193 LINC01546A6NGU7 62 aa3.89□□□□□ -1.79
LIN7C-201ENST00000278193 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
LIN7C-201ENST00000278193 Q8N9L7 120 aa3.89□□□□□ -1.79
LIN7C-201ENST00000278193 A0A0G2JQZ4 141 aa3.88□□□□□ -1.79
LIN7C-201ENST00000278193 LINC00612Q8N6U2 182 aa3.88□□□□□ -1.79
LIN7C-201ENST00000278193 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
LIN7C-201ENST00000278193 M0QY20 66 aa3.87□□□□□ -1.79
LIN7C-201ENST00000278193 KRTAP10-3P60369 221 aa3.87□□□□□ -1.79
LIN7C-201ENST00000278193 KRTAP10-11P60412 298 aa3.87□□□□□ -1.79
LIN7C-201ENST00000278193 FLNAP21333 2647 aaKnown RBP3.87□□□□□ -1.79
LIN7C-201ENST00000278193 ITPR3Q14573 2671 aa3.87□□□□□ -1.79
LIN7C-201ENST00000278193 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
LIN7C-201ENST00000278193 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
LIN7C-201ENST00000278193 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
LIN7C-201ENST00000278193 LOC110117498A0A087WWA1 95 aa3.86□□□□□ -1.79
LIN7C-201ENST00000278193 PRR9Q5T870 116 aa3.86□□□□□ -1.79
LIN7C-201ENST00000278193 LINC01556Q5JQF7 62 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 UNC79Q9P2D8 2635 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 MGAM2Q2M2H8 2515 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 ATRQ13535 2644 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 HRES1P13985 223 aa3.85□□□□□ -1.79
LIN7C-201ENST00000278193 SPRR4Q96PI1 79 aa3.84□□□□□ -1.79
LIN7C-201ENST00000278193 AKAP13Q12802 2813 aa3.84□□□□□ -1.79
LIN7C-201ENST00000278193 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.8
LIN7C-201ENST00000278193 CHD6Q8TD26 2715 aa3.84□□□□□ -1.8
LIN7C-201ENST00000278193 BOD1L1Q8NFC6 3051 aa3.83□□□□□ -1.8
LIN7C-201ENST00000278193 DSPP15924 2871 aaKnown RBP3.83□□□□□ -1.8
LIN7C-201ENST00000278193 ZCCHC13Q8WW36 166 aaKnown RBP3.83□□□□□ -1.8
LIN7C-201ENST00000278193 IGSF10Q6WRI0 2623 aa3.83□□□□□ -1.8
LIN7C-201ENST00000278193 SPENQ96T58 3664 aaKnown RBP3.83□□□□□ -1.8
LIN7C-201ENST00000278193 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
LIN7C-201ENST00000278193 IGLV6-57P01721 117 aa3.83□□□□□ -1.8
LIN7C-201ENST00000278193 WFDC10BQ8IUB3 73 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 SETXQ7Z333 2677 aaKnown RBP3.82□□□□□ -1.8
LIN7C-201ENST00000278193 MAST4O15021 2626 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 CRIP1P50238 77 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 KRTAP3-1Q9BYR8 98 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 ATMQ13315 3056 aa3.82□□□□□ -1.8
LIN7C-201ENST00000278193 COL12A1Q99715 3063 aa3.81□□□□□ -1.8
LIN7C-201ENST00000278193 A0A1W2PNN7 141 aa3.81□□□□□ -1.8
LIN7C-201ENST00000278193 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
LIN7C-201ENST00000278193 CNFNQ9BYD5 112 aa3.81□□□□□ -1.8
LIN7C-201ENST00000278193 LINC00315P59091 139 aa3.8□□□□□ -1.8
LIN7C-201ENST00000278193 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
LIN7C-201ENST00000278193 LCE6AA0A183 80 aa3.8□□□□□ -1.8
LIN7C-201ENST00000278193 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
LIN7C-201ENST00000278193 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
LIN7C-201ENST00000278193 TEP1Q99973 2627 aaKnown RBP3.79□□□□□ -1.8
LIN7C-201ENST00000278193 MGAQ8IWI9 3026 aa3.79□□□□□ -1.8
LIN7C-201ENST00000278193 Q8IZM0 81 aa3.79□□□□□ -1.8
LIN7C-201ENST00000278193 IGLV4-60A0A075B6I1 120 aa3.79□□□□□ -1.8
LIN7C-201ENST00000278193 RELNP78509 3460 aa3.78□□□□□ -1.8
LIN7C-201ENST00000278193 GCN1Q92616 2671 aaKnown RBP3.78□□□□□ -1.8
LIN7C-201ENST00000278193 A0A087WTM6 91 aa3.78□□□□□ -1.8
LIN7C-201ENST00000278193 SLPIP03973 132 aa3.78□□□□□ -1.8
LIN7C-201ENST00000278193 A8MTW9 85 aa3.78□□□□□ -1.8
LIN7C-201ENST00000278193 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
LIN7C-201ENST00000278193 Q96NJ1 140 aa3.77□□□□□ -1.81
LIN7C-201ENST00000278193 CDKN2A-AS1Q9UH64 79 aa3.77□□□□□ -1.81
LIN7C-201ENST00000278193 KALRNO60229 2985 aa3.76□□□□□ -1.81
LIN7C-201ENST00000278193 ITPR1Q14643 2758 aa3.76□□□□□ -1.81
LIN7C-201ENST00000278193 APLNQ9ULZ1 77 aa3.76□□□□□ -1.81
LIN7C-201ENST00000278193 STAB1Q9NY15 2570 aa3.76□□□□□ -1.81
LIN7C-201ENST00000278193 BSNQ9UPA5 3926 aa3.76□□□□□ -1.81
LIN7C-201ENST00000278193 COX6A2Q02221 97 aa3.75□□□□□ -1.81
LIN7C-201ENST00000278193 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
LIN7C-201ENST00000278193 LCE2BO14633 110 aa3.75□□□□□ -1.81
LIN7C-201ENST00000278193 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
LIN7C-201ENST00000278193 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
LIN7C-201ENST00000278193 ASH1LQ9NR48 2969 aaKnown RBP3.74□□□□□ -1.81
LIN7C-201ENST00000278193 COL6A5A8TX70 2615 aa3.73□□□□□ -1.81
LIN7C-201ENST00000278193 Q6ZRX8 168 aa3.72□□□□□ -1.81
LIN7C-201ENST00000278193 CENPEQ02224 2701 aa3.72□□□□□ -1.81
LIN7C-201ENST00000278193 UNQ6190/PRO20217Q6UXQ8 127 aa3.72□□□□□ -1.81
LIN7C-201ENST00000278193 IGKV2-28A0A075B6P5 120 aa3.71□□□□□ -1.82
LIN7C-201ENST00000278193 IGKV2D-28P01615 120 aa3.71□□□□□ -1.82
LIN7C-201ENST00000278193 PRRC2CQ9Y520 2896 aaKnown RBP3.71□□□□□ -1.82
LIN7C-201ENST00000278193 LINC00472Q9H8W2 130 aa3.7□□□□□ -1.82
LIN7C-201ENST00000278193 A0A096LNI7 61 aa3.68□□□□□ -1.82
LIN7C-201ENST00000278193 GVQW2A0A096LPI5 108 aaPredicted RBP3.68□□□□□ -1.82
LIN7C-201ENST00000278193 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
LIN7C-201ENST00000278193 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
LIN7C-201ENST00000278193 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
LIN7C-201ENST00000278193 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
LIN7C-201ENST00000278193 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
LIN7C-201ENST00000278193 WFDC13Q8IUB5 93 aa3.64□□□□□ -1.83
LIN7C-201ENST00000278193 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
LIN7C-201ENST00000278193 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
LIN7C-201ENST00000278193 NBPF19A0A087WUL8 3843 aa3.63□□□□□ -1.83
LIN7C-201ENST00000278193 TENM4Q6N022 2769 aa3.63□□□□□ -1.83
LIN7C-201ENST00000278193 UTP20O75691 2785 aaKnown RBP3.63□□□□□ -1.83
LIN7C-201ENST00000278193 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
LIN7C-201ENST00000278193 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms