RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
SEC16A-201ENST00000277537 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
SEC16A-201ENST00000277537 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 CIRBP-AS1Q8TBR5 109 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 BCE1O60756 84 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
SEC16A-201ENST00000277537 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 OXTP01178 125 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 TNP2Q05952 138 aa5.68□□□□□ -1.5
SEC16A-201ENST00000277537 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
SEC16A-201ENST00000277537 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
SEC16A-201ENST00000277537 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
SEC16A-201ENST00000277537 CXCL6P80162 114 aa5.67□□□□□ -1.5
SEC16A-201ENST00000277537 MOBPQ13875 183 aa5.67□□□□□ -1.5
SEC16A-201ENST00000277537 PSPHP1O15172 72 aa5.66□□□□□ -1.5
SEC16A-201ENST00000277537 IGFL1Q6UW32 110 aa5.66□□□□□ -1.5
SEC16A-201ENST00000277537 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
SEC16A-201ENST00000277537 PANO1I0J062 215 aa5.65□□□□□ -1.5
SEC16A-201ENST00000277537 H7BZZ5 65 aa5.65□□□□□ -1.51
SEC16A-201ENST00000277537 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.51
SEC16A-201ENST00000277537 PSORS1C2Q9UIG4 136 aa5.64□□□□□ -1.51
SEC16A-201ENST00000277537 IGKV4-1P06312 121 aa5.64□□□□□ -1.51
SEC16A-201ENST00000277537 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
SEC16A-201ENST00000277537 C1orf195Q5TG92 126 aa5.63□□□□□ -1.51
SEC16A-201ENST00000277537 SPRR1AP35321 89 aa5.63□□□□□ -1.51
SEC16A-201ENST00000277537 MP68P56378 58 aa5.63□□□□□ -1.51
SEC16A-201ENST00000277537 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
SEC16A-201ENST00000277537 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
SEC16A-201ENST00000277537 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
SEC16A-201ENST00000277537 IGHV6-1A0A0B4J1U7 121 aa5.61□□□□□ -1.51
SEC16A-201ENST00000277537 K7EQZ3 153 aa5.6□□□□□ -1.51
SEC16A-201ENST00000277537 NDUFC1O43677 76 aa5.6□□□□□ -1.51
SEC16A-201ENST00000277537 SPACA4Q8TDM5 124 aa5.6□□□□□ -1.51
SEC16A-201ENST00000277537 KRTAP11-1Q8IUC1 163 aa5.59□□□□□ -1.51
SEC16A-201ENST00000277537 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
SEC16A-201ENST00000277537 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.52
SEC16A-201ENST00000277537 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
SEC16A-201ENST00000277537 ZNF861PO60384 105 aa5.58□□□□□ -1.52
SEC16A-201ENST00000277537 Q5XG85 94 aa5.58□□□□□ -1.52
SEC16A-201ENST00000277537 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
SEC16A-201ENST00000277537 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
SEC16A-201ENST00000277537 H3BS24 57 aa5.57□□□□□ -1.52
SEC16A-201ENST00000277537 Q6ZRN7 208 aaPredicted RBP5.57□□□□□ -1.52
SEC16A-201ENST00000277537 SRRM2Q9UQ35 2752 aaKnown RBP5.57□□□□□ -1.52
SEC16A-201ENST00000277537 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
SEC16A-201ENST00000277537 KLKP1Q107X0 134 aa5.56□□□□□ -1.52
SEC16A-201ENST00000277537 A0A1B0GW54 56 aa5.55□□□□□ -1.52
SEC16A-201ENST00000277537 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
SEC16A-201ENST00000277537 KRTAP10-2P60368 255 aa5.55□□□□□ -1.52
SEC16A-201ENST00000277537 Q6ZR54 194 aa5.55□□□□□ -1.52
SEC16A-201ENST00000277537 CSMD3Q7Z407 3707 aa5.54□□□□□ -1.52
SEC16A-201ENST00000277537 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
SEC16A-201ENST00000277537 KRTAP21-3Q3LHN1 58 aa5.54□□□□□ -1.52
SEC16A-201ENST00000277537 FAM229BQ4G0N7 80 aa5.53□□□□□ -1.52
SEC16A-201ENST00000277537 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
SEC16A-201ENST00000277537 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
SEC16A-201ENST00000277537 FBN3Q75N90 2809 aa5.52□□□□□ -1.53
SEC16A-201ENST00000277537 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
SEC16A-201ENST00000277537 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
SEC16A-201ENST00000277537 CHKB-CPT1BH3BT56 60 aa5.51□□□□□ -1.53
SEC16A-201ENST00000277537 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
SEC16A-201ENST00000277537 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
SEC16A-201ENST00000277537 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
SEC16A-201ENST00000277537 DSCR10P59022 87 aa5.5□□□□□ -1.53
SEC16A-201ENST00000277537 hDV103S1A0JD37 113 aa5.49□□□□□ -1.53
SEC16A-201ENST00000277537 H0Y9P7 68 aa5.49□□□□□ -1.53
SEC16A-201ENST00000277537 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
SEC16A-201ENST00000277537 A8MWP4 228 aa5.49□□□□□ -1.53
SEC16A-201ENST00000277537 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
SEC16A-201ENST00000277537 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
SEC16A-201ENST00000277537 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 C1orf64Q8NEQ6 169 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 A6NED7 52 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 A8MUN3 132 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
SEC16A-201ENST00000277537 ANK2Q01484 3957 aa5.45□□□□□ -1.54
SEC16A-201ENST00000277537 OCR1Q9BZK8 76 aa5.45□□□□□ -1.54
SEC16A-201ENST00000277537 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
SEC16A-201ENST00000277537 SPRR1BP22528 89 aa5.44□□□□□ -1.54
SEC16A-201ENST00000277537 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
SEC16A-201ENST00000277537 IGLV8-61A0A075B6I0 122 aa5.42□□□□□ -1.54
SEC16A-201ENST00000277537 SSBP3-AS1Q7Z2R9 100 aa5.42□□□□□ -1.54
SEC16A-201ENST00000277537 CD164Q04900 197 aa5.42□□□□□ -1.54
SEC16A-201ENST00000277537 J3QL48 77 aa5.41□□□□□ -1.54
SEC16A-201ENST00000277537 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
SEC16A-201ENST00000277537 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
SEC16A-201ENST00000277537 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.55
SEC16A-201ENST00000277537 A0A1B0GVX0 72 aa5.4□□□□□ -1.55
SEC16A-201ENST00000277537 LINC00313P59037 77 aa5.39□□□□□ -1.55
SEC16A-201ENST00000277537 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
SEC16A-201ENST00000277537 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
SEC16A-201ENST00000277537 FLG2Q5D862 2391 aaPredicted RBP5.38□□□□□ -1.55
SEC16A-201ENST00000277537 MRPL34Q9BQ48 92 aaKnown RBP5.38□□□□□ -1.55
SEC16A-201ENST00000277537 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
SEC16A-201ENST00000277537 PRR26Q8N8Z3 221 aa5.37□□□□□ -1.55
SEC16A-201ENST00000277537 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
SEC16A-201ENST00000277537 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms