RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 KMT2AQ03164 3969 aa5.9□□□□□ -1.47
TRIM55-201ENST00000276573 SPRR4Q96PI1 79 aa5.89□□□□□ -1.47
TRIM55-201ENST00000276573 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
TRIM55-201ENST00000276573 IGFL1Q6UW32 110 aa5.88□□□□□ -1.47
TRIM55-201ENST00000276573 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
TRIM55-201ENST00000276573 ATOX1O00244 68 aa5.87□□□□□ -1.47
TRIM55-201ENST00000276573 A0A0G2JQZ4 141 aa5.87□□□□□ -1.47
TRIM55-201ENST00000276573 CRYGAP11844 174 aa5.87□□□□□ -1.47
TRIM55-201ENST00000276573 DNAH2Q9P225 4427 aa5.86□□□□□ -1.47
TRIM55-201ENST00000276573 HECTD4Q9Y4D8 3996 aa5.86□□□□□ -1.47
TRIM55-201ENST00000276573 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
TRIM55-201ENST00000276573 SCXQ7RTU7 201 aa5.86□□□□□ -1.47
TRIM55-201ENST00000276573 DNAH17Q9UFH2 4485 aa5.85□□□□□ -1.47
TRIM55-201ENST00000276573 DNAH6Q9C0G6 4158 aa5.85□□□□□ -1.47
TRIM55-201ENST00000276573 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
TRIM55-201ENST00000276573 BPY2O14599 106 aa5.84□□□□□ -1.48
TRIM55-201ENST00000276573 ZNF861PO60384 105 aa5.84□□□□□ -1.48
TRIM55-201ENST00000276573 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
TRIM55-201ENST00000276573 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
TRIM55-201ENST00000276573 COX7CP15954 63 aa5.82□□□□□ -1.48
TRIM55-201ENST00000276573 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
TRIM55-201ENST00000276573 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
TRIM55-201ENST00000276573 UQCRQO14949 82 aa5.81□□□□□ -1.48
TRIM55-201ENST00000276573 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
TRIM55-201ENST00000276573 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
TRIM55-201ENST00000276573 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
TRIM55-201ENST00000276573 IGLV7-43P04211 117 aa5.8□□□□□ -1.48
TRIM55-201ENST00000276573 Q6ZSA8 131 aa5.8□□□□□ -1.48
TRIM55-201ENST00000276573 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
TRIM55-201ENST00000276573 Q8N9L7 120 aa5.8□□□□□ -1.48
TRIM55-201ENST00000276573 A0A087WSZ3 146 aa5.79□□□□□ -1.48
TRIM55-201ENST00000276573 IGLV9-49A0A0B4J1Y8 123 aa5.78□□□□□ -1.48
TRIM55-201ENST00000276573 DSCR10P59022 87 aa5.78□□□□□ -1.48
TRIM55-201ENST00000276573 RPL37AP61513 92 aaKnown RBP5.77□□□□□ -1.49
TRIM55-201ENST00000276573 C9orf153Q5TBE3 101 aa5.76□□□□□ -1.49
TRIM55-201ENST00000276573 LCE6AA0A183 80 aa5.76□□□□□ -1.49
TRIM55-201ENST00000276573 SMIM20Q8N5G0 67 aa5.76□□□□□ -1.49
TRIM55-201ENST00000276573 ANAPC11Q9NYG5 84 aa5.76□□□□□ -1.49
TRIM55-201ENST00000276573 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
TRIM55-201ENST00000276573 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
TRIM55-201ENST00000276573 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
TRIM55-201ENST00000276573 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
TRIM55-201ENST00000276573 DNAH8Q96JB1 4490 aa5.73□□□□□ -1.49
TRIM55-201ENST00000276573 K7EQZ3 153 aa5.73□□□□□ -1.49
TRIM55-201ENST00000276573 MOBPQ13875 183 aa5.73□□□□□ -1.49
TRIM55-201ENST00000276573 LINC00336Q6ZUF6 198 aa5.73□□□□□ -1.49
TRIM55-201ENST00000276573 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
TRIM55-201ENST00000276573 PKD1P98161 4303 aa5.72□□□□□ -1.49
TRIM55-201ENST00000276573 HYDINQ4G0P3 5121 aa5.72□□□□□ -1.49
TRIM55-201ENST00000276573 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
TRIM55-201ENST00000276573 DNAH5Q8TE73 4624 aa5.69□□□□□ -1.5
TRIM55-201ENST00000276573 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
TRIM55-201ENST00000276573 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
TRIM55-201ENST00000276573 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
TRIM55-201ENST00000276573 J3KT08 172 aa5.68□□□□□ -1.5
TRIM55-201ENST00000276573 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
TRIM55-201ENST00000276573 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
TRIM55-201ENST00000276573 SS18L2Q9UHA2 77 aa5.68□□□□□ -1.5
TRIM55-201ENST00000276573 HCG22E2RYF7 251 aa5.67□□□□□ -1.5
TRIM55-201ENST00000276573 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
TRIM55-201ENST00000276573 A0A1B0GVY2 172 aa5.67□□□□□ -1.5
TRIM55-201ENST00000276573 A8MWP4 228 aa5.67□□□□□ -1.5
TRIM55-201ENST00000276573 Q96NJ1 140 aa5.67□□□□□ -1.5
TRIM55-201ENST00000276573 CD164Q04900 197 aa5.65□□□□□ -1.51
TRIM55-201ENST00000276573 FAM229BQ4G0N7 80 aa5.64□□□□□ -1.51
TRIM55-201ENST00000276573 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
TRIM55-201ENST00000276573 NDUFB1O75438 58 aa5.64□□□□□ -1.51
TRIM55-201ENST00000276573 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
TRIM55-201ENST00000276573 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
TRIM55-201ENST00000276573 A0A087X002 238 aa5.63□□□□□ -1.51
TRIM55-201ENST00000276573 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
TRIM55-201ENST00000276573 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
TRIM55-201ENST00000276573 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
TRIM55-201ENST00000276573 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
TRIM55-201ENST00000276573 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
TRIM55-201ENST00000276573 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
TRIM55-201ENST00000276573 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
TRIM55-201ENST00000276573 TMEM258P61165 79 aa5.6□□□□□ -1.51
TRIM55-201ENST00000276573 KMT2CQ8NEZ4 4911 aaKnown RBP5.6□□□□□ -1.51
TRIM55-201ENST00000276573 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
TRIM55-201ENST00000276573 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
TRIM55-201ENST00000276573 H7BZZ5 65 aa5.59□□□□□ -1.51
TRIM55-201ENST00000276573 SMR3BP02814 79 aaPredicted RBP5.58□□□□□ -1.52
TRIM55-201ENST00000276573 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
TRIM55-201ENST00000276573 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
TRIM55-201ENST00000276573 A0A1B0GVX0 72 aa5.58□□□□□ -1.52
TRIM55-201ENST00000276573 CDK2AP2O75956 126 aa5.58□□□□□ -1.52
TRIM55-201ENST00000276573 PLA2G1BP04054 148 aaKnown RBP5.58□□□□□ -1.52
TRIM55-201ENST00000276573 C5orf47Q569G3 176 aa5.58□□□□□ -1.52
TRIM55-201ENST00000276573 NDUFC1O43677 76 aa5.57□□□□□ -1.52
TRIM55-201ENST00000276573 C8orf17Q9NRJ1 99 aa5.57□□□□□ -1.52
TRIM55-201ENST00000276573 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
TRIM55-201ENST00000276573 IGHV6-1A0A0B4J1U7 121 aa5.56□□□□□ -1.52
TRIM55-201ENST00000276573 Q5XG85 94 aa5.55□□□□□ -1.52
TRIM55-201ENST00000276573 TYMSOSQ8TAI1 123 aa5.54□□□□□ -1.52
TRIM55-201ENST00000276573 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
TRIM55-201ENST00000276573 KRTAP10-4P60372 401 aaPredicted RBP5.53□□□□□ -1.52
TRIM55-201ENST00000276573 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
TRIM55-201ENST00000276573 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
TRIM55-201ENST00000276573 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms