RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BKO60814 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BJP06899 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BOP23527 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BBP33778 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BDP58876 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BCP62807 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 TAL2Q16559 108 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST2H2BEQ16778 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BHQ93079 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BNQ99877 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 HIST1H2BMQ99879 126 aa4.69□□□□□ -1.66
TPM3-201ENST00000271850 USH2AO75445 5202 aa4.68□□□□□ -1.66
TPM3-201ENST00000271850 CBY1Q9Y3M2 126 aa4.68□□□□□ -1.66
TPM3-201ENST00000271850 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
TPM3-201ENST00000271850 M0R2T5 61 aa4.67□□□□□ -1.66
TPM3-201ENST00000271850 AKR1D1P51857 326 aa4.67□□□□□ -1.66
TPM3-201ENST00000271850 SLC7A5P1Q8MH63 180 aa4.67□□□□□ -1.66
TPM3-201ENST00000271850 A0A1B0GWB2 263 aa4.66□□□□□ -1.66
TPM3-201ENST00000271850 C3orf79P0CE67 100 aa4.66□□□□□ -1.66
TPM3-201ENST00000271850 PET117Q6UWS5 81 aa4.66□□□□□ -1.66
TPM3-201ENST00000271850 LINC00518Q8N0U6 118 aa4.66□□□□□ -1.66
TPM3-201ENST00000271850 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
TPM3-201ENST00000271850 PCP2Q8IVA1 136 aa4.64□□□□□ -1.67
TPM3-201ENST00000271850 MUSTN1Q8IVN3 82 aa4.64□□□□□ -1.67
TPM3-201ENST00000271850 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
TPM3-201ENST00000271850 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
TPM3-201ENST00000271850 A6NDN8 102 aa4.62□□□□□ -1.67
TPM3-201ENST00000271850 ATOH7Q8N100 152 aa4.62□□□□□ -1.67
TPM3-201ENST00000271850 IFITM1P13164 125 aa4.61□□□□□ -1.67
TPM3-201ENST00000271850 IGFL1Q6UW32 110 aa4.61□□□□□ -1.67
TPM3-201ENST00000271850 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
TPM3-201ENST00000271850 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
TPM3-201ENST00000271850 COA6Q5JTJ3 125 aaKnown RBP4.6□□□□□ -1.67
TPM3-201ENST00000271850 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 TCL1BO95988 128 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 KRTDAPP60985 99 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 LINC00575Q6W349 94 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 Q75L30 129 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 OBSCN-AS1Q96MR7 158 aa4.59□□□□□ -1.67
TPM3-201ENST00000271850 A4D1N5 150 aa4.58□□□□□ -1.68
TPM3-201ENST00000271850 Q6ZQY7 126 aa4.58□□□□□ -1.68
TPM3-201ENST00000271850 Q6ZVH6 145 aa4.58□□□□□ -1.68
TPM3-201ENST00000271850 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
TPM3-201ENST00000271850 TRAV13-2A0A0B4J235 113 aa4.57□□□□□ -1.68
TPM3-201ENST00000271850 CLEC2BQ92478 149 aa4.57□□□□□ -1.68
TPM3-201ENST00000271850 Q6Q795 121 aa4.56□□□□□ -1.68
TPM3-201ENST00000271850 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
TPM3-201ENST00000271850 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
TPM3-201ENST00000271850 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 F8WEM9 126 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 H3BUT2 72 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 MT2AP02795 61 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 OCIAD2Q56VL3 154 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 Q6JHZ5 121 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
TPM3-201ENST00000271850 A8MUU9 505 aa4.53□□□□□ -1.68
TPM3-201ENST00000271850 ATP11AUNQ6ZP68 121 aa4.53□□□□□ -1.68
TPM3-201ENST00000271850 MT1FP04733 61 aa4.52□□□□□ -1.69
TPM3-201ENST00000271850 Q96NJ1 140 aa4.52□□□□□ -1.69
TPM3-201ENST00000271850 C20orf202A1L168 122 aa4.51□□□□□ -1.69
TPM3-201ENST00000271850 C12orf57Q99622 126 aa4.51□□□□□ -1.69
TPM3-201ENST00000271850 CFC1P0CG37 223 aa4.5□□□□□ -1.69
TPM3-201ENST00000271850 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.5□□□□□ -1.69
TPM3-201ENST00000271850 LST1O00453 97 aa4.49□□□□□ -1.69
TPM3-201ENST00000271850 VAMP3Q15836 100 aa4.49□□□□□ -1.69
TPM3-201ENST00000271850 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
TPM3-201ENST00000271850 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
TPM3-201ENST00000271850 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
TPM3-201ENST00000271850 DSCR10P59022 87 aa4.47□□□□□ -1.69
TPM3-201ENST00000271850 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
TPM3-201ENST00000271850 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
TPM3-201ENST00000271850 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
TPM3-201ENST00000271850 HRES1P13985 223 aa4.46□□□□□ -1.7
TPM3-201ENST00000271850 SNRPEP62304 92 aaKnown RBP4.46□□□□□ -1.7
TPM3-201ENST00000271850 A0A087WSZ3 146 aa4.45□□□□□ -1.7
TPM3-201ENST00000271850 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
TPM3-201ENST00000271850 SNHG12Q9BXW3 62 aa4.45□□□□□ -1.7
TPM3-201ENST00000271850 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
TPM3-201ENST00000271850 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
TPM3-201ENST00000271850 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
TPM3-201ENST00000271850 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
TPM3-201ENST00000271850 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
TPM3-201ENST00000271850 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
TPM3-201ENST00000271850 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
TPM3-201ENST00000271850 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
TPM3-201ENST00000271850 COX8AP10176 69 aa4.41□□□□□ -1.7
TPM3-201ENST00000271850 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
TPM3-201ENST00000271850 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
TPM3-201ENST00000271850 H3BMG7 143 aa4.39□□□□□ -1.71
TPM3-201ENST00000271850 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
TPM3-201ENST00000271850 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
TPM3-201ENST00000271850 A0A0B4J2C4 111 aa4.38□□□□□ -1.71
TPM3-201ENST00000271850 DLEU1O43261 78 aa4.38□□□□□ -1.71
TPM3-201ENST00000271850 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
TPM3-201ENST00000271850 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
TPM3-201ENST00000271850 LINC00313P59037 77 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms