RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
SMARCC2-201ENST00000267064 DNAH3Q8TD57 4116 aa11.59□□□□□ -0.55
SMARCC2-201ENST00000267064 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
SMARCC2-201ENST00000267064 MOBPQ13875 183 aa11.59□□□□□ -0.55
SMARCC2-201ENST00000267064 COX7CP15954 63 aa11.58□□□□□ -0.56
SMARCC2-201ENST00000267064 CXCL6P80162 114 aa11.57□□□□□ -0.56
SMARCC2-201ENST00000267064 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
SMARCC2-201ENST00000267064 SPINK6Q6UWN8 80 aa11.57□□□□□ -0.56
SMARCC2-201ENST00000267064 ZNF706Q9Y5V0 76 aaPredicted RBP11.56□□□□□ -0.56
SMARCC2-201ENST00000267064 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
SMARCC2-201ENST00000267064 SMIM29Q86T20 159 aa11.55□□□□□ -0.56
SMARCC2-201ENST00000267064 PRKDCP78527 4128 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-201ENST00000267064 SNURFQ9Y675 71 aa11.54□□□□□ -0.56
SMARCC2-201ENST00000267064 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
SMARCC2-201ENST00000267064 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
SMARCC2-201ENST00000267064 LYSTQ99698 3801 aa11.52□□□□□ -0.56
SMARCC2-201ENST00000267064 DNAH10Q8IVF4 4471 aa11.52□□□□□ -0.56
SMARCC2-201ENST00000267064 PLECQ15149 4684 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-201ENST00000267064 ZNF861PO60384 105 aa11.5□□□□□ -0.57
SMARCC2-201ENST00000267064 NDUFB1O75438 58 aa11.47□□□□□ -0.57
SMARCC2-201ENST00000267064 CRYGAP11844 174 aa11.47□□□□□ -0.57
SMARCC2-201ENST00000267064 SPRR4Q96PI1 79 aa11.47□□□□□ -0.57
SMARCC2-201ENST00000267064 K7EQZ3 153 aa11.47□□□□□ -0.57
SMARCC2-201ENST00000267064 PLAC8Q9NZF1 115 aa11.47□□□□□ -0.57
SMARCC2-201ENST00000267064 KRTAP21-3Q3LHN1 58 aa11.46□□□□□ -0.57
SMARCC2-201ENST00000267064 NDUFS5O43920 106 aa11.45□□□□□ -0.58
SMARCC2-201ENST00000267064 IGKV4-1P06312 121 aa11.45□□□□□ -0.58
SMARCC2-201ENST00000267064 SMR3BP02814 79 aaPredicted RBP11.44□□□□□ -0.58
SMARCC2-201ENST00000267064 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
SMARCC2-201ENST00000267064 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
SMARCC2-201ENST00000267064 TRAV7A0A075B6U4 112 aa11.41□□□□□ -0.58
SMARCC2-201ENST00000267064 SMIM20Q8N5G0 67 aa11.4□□□□□ -0.58
SMARCC2-201ENST00000267064 STARD9Q9P2P6 4700 aa11.4□□□□□ -0.58
SMARCC2-201ENST00000267064 A0A1B0GW54 56 aa11.37□□□□□ -0.59
SMARCC2-201ENST00000267064 IGHV6-1A0A0B4J1U7 121 aa11.37□□□□□ -0.59
SMARCC2-201ENST00000267064 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
SMARCC2-201ENST00000267064 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
SMARCC2-201ENST00000267064 DSCR10P59022 87 aa11.34□□□□□ -0.59
SMARCC2-201ENST00000267064 CASC2Q6XLA1 102 aa11.32□□□□□ -0.6
SMARCC2-201ENST00000267064 SPRR1BP22528 89 aa11.32□□□□□ -0.6
SMARCC2-201ENST00000267064 KRTAP13-1Q8IUC0 172 aa11.29□□□□□ -0.6
SMARCC2-201ENST00000267064 DNAH7Q8WXX0 4024 aa11.28□□□□□ -0.6
SMARCC2-201ENST00000267064 TMEM254Q8TBM7 123 aa11.28□□□□□ -0.6
SMARCC2-201ENST00000267064 CYSTM1Q9H1C7 97 aa11.27□□□□□ -0.61
SMARCC2-201ENST00000267064 IGLV8-61A0A075B6I0 122 aa11.27□□□□□ -0.61
SMARCC2-201ENST00000267064 MP68P56378 58 aa11.26□□□□□ -0.61
SMARCC2-201ENST00000267064 PRR4Q16378 134 aa11.26□□□□□ -0.61
SMARCC2-201ENST00000267064 PLA2G1BP04054 148 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-201ENST00000267064 LCE6AA0A183 80 aa11.23□□□□□ -0.61
SMARCC2-201ENST00000267064 A8MWP4 228 aa11.22□□□□□ -0.61
SMARCC2-201ENST00000267064 LINC00208Q96KT6 92 aa11.21□□□□□ -0.61
SMARCC2-201ENST00000267064 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
SMARCC2-201ENST00000267064 J3KT08 172 aa11.2□□□□□ -0.62
SMARCC2-201ENST00000267064 FAM236DA0A1B0GTK5 79 aa11.19□□□□□ -0.62
SMARCC2-201ENST00000267064 FAM236CP0DP71 79 aa11.19□□□□□ -0.62
SMARCC2-201ENST00000267064 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
SMARCC2-201ENST00000267064 TMEM258P61165 79 aa11.18□□□□□ -0.62
SMARCC2-201ENST00000267064 DNAH1Q9P2D7 4330 aa11.18□□□□□ -0.62
SMARCC2-201ENST00000267064 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
SMARCC2-201ENST00000267064 hDV103S1A0JD37 113 aa11.17□□□□□ -0.62
SMARCC2-201ENST00000267064 TYMSOSQ8TAI1 123 aa11.17□□□□□ -0.62
SMARCC2-201ENST00000267064 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
SMARCC2-201ENST00000267064 LINC00472Q9H8W2 130 aa11.14□□□□□ -0.63
SMARCC2-201ENST00000267064 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
SMARCC2-201ENST00000267064 A0A087X002 238 aa11.14□□□□□ -0.63
SMARCC2-201ENST00000267064 VPS13DQ5THJ4 4388 aa11.13□□□□□ -0.63
SMARCC2-201ENST00000267064 OCR1Q9BZK8 76 aa11.13□□□□□ -0.63
SMARCC2-201ENST00000267064 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
SMARCC2-201ENST00000267064 H0Y9P7 68 aa11.11□□□□□ -0.63
SMARCC2-201ENST00000267064 PRR26Q8N8Z3 221 aa11.07□□□□□ -0.64
SMARCC2-201ENST00000267064 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
SMARCC2-201ENST00000267064 C8orf17Q9NRJ1 99 aa11.06□□□□□ -0.64
SMARCC2-201ENST00000267064 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
SMARCC2-201ENST00000267064 NDUFC1O43677 76 aa11.05□□□□□ -0.64
SMARCC2-201ENST00000267064 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
SMARCC2-201ENST00000267064 H7BZZ5 65 aa11.05□□□□□ -0.64
SMARCC2-201ENST00000267064 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
SMARCC2-201ENST00000267064 Q6ZSA8 131 aa11.04□□□□□ -0.64
SMARCC2-201ENST00000267064 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
SMARCC2-201ENST00000267064 C1orf64Q8NEQ6 169 aa11.01□□□□□ -0.65
SMARCC2-201ENST00000267064 LIMD2Q9BT23 127 aa10.99□□□□□ -0.65
SMARCC2-201ENST00000267064 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
SMARCC2-201ENST00000267064 DMBT1Q9UGM3 2413 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-201ENST00000267064 KRTAP13-2Q52LG2 175 aa10.97□□□□□ -0.65
SMARCC2-201ENST00000267064 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
SMARCC2-201ENST00000267064 TRAV22A0A0B4J277 110 aa10.96□□□□□ -0.65
SMARCC2-201ENST00000267064 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.65
SMARCC2-201ENST00000267064 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
SMARCC2-201ENST00000267064 FAM229AH3BQW9 127 aa10.96□□□□□ -0.66
SMARCC2-201ENST00000267064 LINC00313P59037 77 aa10.96□□□□□ -0.66
SMARCC2-201ENST00000267064 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.66
SMARCC2-201ENST00000267064 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-201ENST00000267064 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
SMARCC2-201ENST00000267064 DNAH2Q9P225 4427 aa10.93□□□□□ -0.66
SMARCC2-201ENST00000267064 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
SMARCC2-201ENST00000267064 Q96NJ1 140 aa10.91□□□□□ -0.66
SMARCC2-201ENST00000267064 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
SMARCC2-201ENST00000267064 CD164Q04900 197 aa10.89□□□□□ -0.67
SMARCC2-201ENST00000267064 KRTAP29-1A8MX34 341 aaPredicted RBP10.88□□□□□ -0.67
SMARCC2-201ENST00000267064 TP53AIP1Q9HCN2 124 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms