RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 J3KT08 172 aa8.1□□□□□ -1.11
CPSF6-201ENST00000266679 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
CPSF6-201ENST00000266679 VPS13DQ5THJ4 4388 aa8.1□□□□□ -1.11
CPSF6-201ENST00000266679 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
CPSF6-201ENST00000266679 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
CPSF6-201ENST00000266679 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
CPSF6-201ENST00000266679 NBDYA0A0U1RRE5 68 aa8.09□□□□□ -1.12
CPSF6-201ENST00000266679 LY6G6CO95867 125 aa8.09□□□□□ -1.12
CPSF6-201ENST00000266679 SPRR4Q96PI1 79 aa8.09□□□□□ -1.12
CPSF6-201ENST00000266679 A0A1B0GW54 56 aa8.08□□□□□ -1.12
CPSF6-201ENST00000266679 LRCOL1A6NCL2 159 aa8.07□□□□□ -1.12
CPSF6-201ENST00000266679 NUPR2A6NF83 97 aa8.07□□□□□ -1.12
CPSF6-201ENST00000266679 DPH3Q96FX2 82 aa8.07□□□□□ -1.12
CPSF6-201ENST00000266679 IGFL1Q6UW32 110 aa8.06□□□□□ -1.12
CPSF6-201ENST00000266679 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
CPSF6-201ENST00000266679 H7BZZ5 65 aa8.05□□□□□ -1.12
CPSF6-201ENST00000266679 KLKP1Q107X0 134 aa8.05□□□□□ -1.12
CPSF6-201ENST00000266679 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
CPSF6-201ENST00000266679 UBE2AP49459 152 aa8.04□□□□□ -1.12
CPSF6-201ENST00000266679 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
CPSF6-201ENST00000266679 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
CPSF6-201ENST00000266679 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
CPSF6-201ENST00000266679 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
CPSF6-201ENST00000266679 RPS28P62857 69 aaKnown RBP8.03□□□□□ -1.12
CPSF6-201ENST00000266679 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
CPSF6-201ENST00000266679 PANO1I0J062 215 aa8.03□□□□□ -1.12
CPSF6-201ENST00000266679 OXTP01178 125 aa8.02□□□□□ -1.13
CPSF6-201ENST00000266679 DSCR10P59022 87 aa8.02□□□□□ -1.13
CPSF6-201ENST00000266679 DNAH2Q9P225 4427 aa8.01□□□□□ -1.13
CPSF6-201ENST00000266679 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
CPSF6-201ENST00000266679 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
CPSF6-201ENST00000266679 K7EQZ3 153 aa8.01□□□□□ -1.13
CPSF6-201ENST00000266679 IGLV8-61A0A075B6I0 122 aa8□□□□□ -1.13
CPSF6-201ENST00000266679 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
CPSF6-201ENST00000266679 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
CPSF6-201ENST00000266679 A0A087WSZ3 146 aa7.98□□□□□ -1.13
CPSF6-201ENST00000266679 H0Y9J4 135 aa7.98□□□□□ -1.13
CPSF6-201ENST00000266679 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
CPSF6-201ENST00000266679 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
CPSF6-201ENST00000266679 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
CPSF6-201ENST00000266679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-201ENST00000266679 SPRR1BP22528 89 aa7.96□□□□□ -1.14
CPSF6-201ENST00000266679 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
CPSF6-201ENST00000266679 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
CPSF6-201ENST00000266679 NDUFC1O43677 76 aa7.95□□□□□ -1.14
CPSF6-201ENST00000266679 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
CPSF6-201ENST00000266679 A0A0U1RQV1 116 aa7.94□□□□□ -1.14
CPSF6-201ENST00000266679 A0A087WTM6 91 aa7.93□□□□□ -1.14
CPSF6-201ENST00000266679 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
CPSF6-201ENST00000266679 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
CPSF6-201ENST00000266679 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
CPSF6-201ENST00000266679 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
CPSF6-201ENST00000266679 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
CPSF6-201ENST00000266679 RTL8CO15255 209 aa7.9□□□□□ -1.15
CPSF6-201ENST00000266679 PKD1P98161 4303 aa7.89□□□□□ -1.15
CPSF6-201ENST00000266679 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
CPSF6-201ENST00000266679 HERC2O95714 4834 aa7.88□□□□□ -1.15
CPSF6-201ENST00000266679 IGLV9-49A0A0B4J1Y8 123 aa7.87□□□□□ -1.15
CPSF6-201ENST00000266679 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-201ENST00000266679 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
CPSF6-201ENST00000266679 Q6ZR54 194 aa7.86□□□□□ -1.15
CPSF6-201ENST00000266679 Q5XG85 94 aa7.84□□□□□ -1.15
CPSF6-201ENST00000266679 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
CPSF6-201ENST00000266679 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
CPSF6-201ENST00000266679 C4orf26Q17RF5 130 aa7.82□□□□□ -1.16
CPSF6-201ENST00000266679 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
CPSF6-201ENST00000266679 IGLV5-52A0A0A0MRZ9 124 aa7.82□□□□□ -1.16
CPSF6-201ENST00000266679 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
CPSF6-201ENST00000266679 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
CPSF6-201ENST00000266679 A8MWP4 228 aa7.81□□□□□ -1.16
CPSF6-201ENST00000266679 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
CPSF6-201ENST00000266679 HRCT1Q6UXD1 115 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 CASC2Q6XLA1 102 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 KRTAP29-1A8MX34 341 aaPredicted RBP7.8□□□□□ -1.16
CPSF6-201ENST00000266679 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 C5orf47Q569G3 176 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 C1orf134Q5TEV5 83 aa7.8□□□□□ -1.16
CPSF6-201ENST00000266679 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
CPSF6-201ENST00000266679 ZNF706Q9Y5V0 76 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-201ENST00000266679 ANAPC11Q9NYG5 84 aa7.78□□□□□ -1.16
CPSF6-201ENST00000266679 MOBPQ13875 183 aa7.77□□□□□ -1.17
CPSF6-201ENST00000266679 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
CPSF6-201ENST00000266679 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
CPSF6-201ENST00000266679 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
CPSF6-201ENST00000266679 ZNF861PO60384 105 aa7.75□□□□□ -1.17
CPSF6-201ENST00000266679 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
CPSF6-201ENST00000266679 FAM229BQ4G0N7 80 aa7.75□□□□□ -1.17
CPSF6-201ENST00000266679 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-201ENST00000266679 Q96NJ1 140 aa7.75□□□□□ -1.17
CPSF6-201ENST00000266679 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
CPSF6-201ENST00000266679 MP68P56378 58 aa7.74□□□□□ -1.17
CPSF6-201ENST00000266679 LINC00336Q6ZUF6 198 aa7.73□□□□□ -1.17
CPSF6-201ENST00000266679 RYR1P21817 5038 aa7.72□□□□□ -1.17
CPSF6-201ENST00000266679 H0Y9P7 68 aa7.72□□□□□ -1.17
CPSF6-201ENST00000266679 NDUFB1O75438 58 aa7.72□□□□□ -1.17
CPSF6-201ENST00000266679 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
CPSF6-201ENST00000266679 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
CPSF6-201ENST00000266679 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
CPSF6-201ENST00000266679 PRR4Q16378 134 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms