RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
VCAN-201ENST00000265077 RPL37AP61513 92 aaKnown RBP3.79□□□□□ -1.8
VCAN-201ENST00000265077 Q8NAQ8 132 aa3.78□□□□□ -1.8
VCAN-201ENST00000265077 A6NN06 94 aa3.78□□□□□ -1.8
VCAN-201ENST00000265077 MKI67P46013 3256 aaKnown RBP3.76□□□□□ -1.81
VCAN-201ENST00000265077 CSNK1G2-AS1Q8NCQ2 148 aa3.76□□□□□ -1.81
VCAN-201ENST00000265077 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
VCAN-201ENST00000265077 MRPL34Q9BQ48 92 aaKnown RBP3.76□□□□□ -1.81
VCAN-201ENST00000265077 PLA2G2DQ9UNK4 145 aa3.75□□□□□ -1.81
VCAN-201ENST00000265077 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
VCAN-201ENST00000265077 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
VCAN-201ENST00000265077 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
VCAN-201ENST00000265077 TGP01266 2768 aa3.74□□□□□ -1.81
VCAN-201ENST00000265077 SPINK7P58062 85 aa3.74□□□□□ -1.81
VCAN-201ENST00000265077 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
VCAN-201ENST00000265077 IGLV1-50A0A075B6I6 118 aa3.74□□□□□ -1.81
VCAN-201ENST00000265077 NBDYA0A0U1RRE5 68 aa3.74□□□□□ -1.81
VCAN-201ENST00000265077 CFAP47Q6ZTR5 3102 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 PKD1L1Q8TDX9 2849 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 XIRP2A4UGR9 3374 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
VCAN-201ENST00000265077 COL6A3P12111 3177 aa3.72□□□□□ -1.81
VCAN-201ENST00000265077 TLX1NBP0CAT3 122 aa3.72□□□□□ -1.81
VCAN-201ENST00000265077 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
VCAN-201ENST00000265077 CELSR3Q9NYQ7 3312 aa3.72□□□□□ -1.81
VCAN-201ENST00000265077 A0A1B0GVX0 72 aa3.71□□□□□ -1.81
VCAN-201ENST00000265077 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.81
VCAN-201ENST00000265077 Q8N377 158 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 RTL8CO15255 209 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 C15orf56Q8N910 161 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 HRNRQ86YZ3 2850 aaPredicted RBP3.71□□□□□ -1.82
VCAN-201ENST00000265077 REV3LO60673 3130 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 LINC00612Q8N6U2 182 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
VCAN-201ENST00000265077 ZNF575Q86XF7 245 aa3.7□□□□□ -1.82
VCAN-201ENST00000265077 VWFP04275 2813 aa3.7□□□□□ -1.82
VCAN-201ENST00000265077 A0A096LNT2 108 aa3.7□□□□□ -1.82
VCAN-201ENST00000265077 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
VCAN-201ENST00000265077 TENM4Q6N022 2769 aa3.69□□□□□ -1.82
VCAN-201ENST00000265077 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
VCAN-201ENST00000265077 DSCR10P59022 87 aa3.69□□□□□ -1.82
VCAN-201ENST00000265077 PLA2G1BP04054 148 aaKnown RBP3.69□□□□□ -1.82
VCAN-201ENST00000265077 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
VCAN-201ENST00000265077 Q96NJ1 140 aa3.68□□□□□ -1.82
VCAN-201ENST00000265077 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
VCAN-201ENST00000265077 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
VCAN-201ENST00000265077 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
VCAN-201ENST00000265077 LAMA3Q16787 3333 aa3.67□□□□□ -1.82
VCAN-201ENST00000265077 IGLV5-48A0A075B6I7 105 aa3.67□□□□□ -1.82
VCAN-201ENST00000265077 ZNF861PO60384 105 aa3.67□□□□□ -1.82
VCAN-201ENST00000265077 C9orf163Q8N9P6 203 aa3.66□□□□□ -1.82
VCAN-201ENST00000265077 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
VCAN-201ENST00000265077 SPRR4Q96PI1 79 aa3.66□□□□□ -1.82
VCAN-201ENST00000265077 C19orf73Q9NVV2 129 aa3.66□□□□□ -1.82
VCAN-201ENST00000265077 IGLV5-37A0A075B6J1 123 aa3.65□□□□□ -1.82
VCAN-201ENST00000265077 FAM104AQ969W3 186 aa3.65□□□□□ -1.83
VCAN-201ENST00000265077 HRES1P13985 223 aa3.64□□□□□ -1.83
VCAN-201ENST00000265077 A8MU10 97 aa3.64□□□□□ -1.83
VCAN-201ENST00000265077 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
VCAN-201ENST00000265077 A0A087X002 238 aa3.63□□□□□ -1.83
VCAN-201ENST00000265077 BRCA2P51587 3418 aa3.62□□□□□ -1.83
VCAN-201ENST00000265077 ROMO1P60602 79 aa3.62□□□□□ -1.83
VCAN-201ENST00000265077 EYSQ5T1H1 3165 aa3.61□□□□□ -1.83
VCAN-201ENST00000265077 KRTAP24-1Q3LI83 254 aa3.6□□□□□ -1.83
VCAN-201ENST00000265077 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
VCAN-201ENST00000265077 LCE6AA0A183 80 aa3.59□□□□□ -1.83
VCAN-201ENST00000265077 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
VCAN-201ENST00000265077 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
VCAN-201ENST00000265077 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
VCAN-201ENST00000265077 PSORS1C2Q9UIG4 136 aa3.59□□□□□ -1.83
VCAN-201ENST00000265077 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
VCAN-201ENST00000265077 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.84
VCAN-201ENST00000265077 APLNQ9ULZ1 77 aa3.59□□□□□ -1.84
VCAN-201ENST00000265077 A0A087WTM6 91 aa3.59□□□□□ -1.84
VCAN-201ENST00000265077 A0A1B0GU33 70 aa3.59□□□□□ -1.84
VCAN-201ENST00000265077 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
VCAN-201ENST00000265077 K7EIL1 84 aa3.58□□□□□ -1.84
VCAN-201ENST00000265077 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
VCAN-201ENST00000265077 KRTAP10-11P60412 298 aa3.58□□□□□ -1.84
VCAN-201ENST00000265077 FBN1P35555 2871 aaKnown RBP3.58□□□□□ -1.84
VCAN-201ENST00000265077 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
VCAN-201ENST00000265077 UNC80Q8N2C7 3258 aa3.57□□□□□ -1.84
VCAN-201ENST00000265077 WWC2-AS2Q96NR7 200 aa3.57□□□□□ -1.84
VCAN-201ENST00000265077 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
VCAN-201ENST00000265077 COL7A1Q02388 2944 aa3.55□□□□□ -1.84
VCAN-201ENST00000265077 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
VCAN-201ENST00000265077 SPRR1AP35321 89 aa3.54□□□□□ -1.84
VCAN-201ENST00000265077 USP34Q70CQ2 3546 aa3.54□□□□□ -1.84
VCAN-201ENST00000265077 VCANP13611 3396 aa3.54□□□□□ -1.84
VCAN-201ENST00000265077 Q6ZR54 194 aa3.54□□□□□ -1.84
VCAN-201ENST00000265077 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
VCAN-201ENST00000265077 A0A0D9SG42 100 aa3.52□□□□□ -1.85
VCAN-201ENST00000265077 CASC10Q5T4H9 136 aa3.52□□□□□ -1.85
VCAN-201ENST00000265077 DNAH14Q0VDD8 3507 aa3.52□□□□□ -1.85
VCAN-201ENST00000265077 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
VCAN-201ENST00000265077 Q8N1X5 172 aa3.51□□□□□ -1.85
VCAN-201ENST00000265077 KRTAP1-3Q8IUG1 177 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms