RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 C9JAW5 83 aa5.89□□□□□ -1.47
SNRNP40-201ENST00000263694 Q5VSD8 79 aa5.89□□□□□ -1.47
SNRNP40-201ENST00000263694 A0A1B0GX51 115 aa5.88□□□□□ -1.47
SNRNP40-201ENST00000263694 DNAL4O96015 105 aa5.88□□□□□ -1.47
SNRNP40-201ENST00000263694 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-201ENST00000263694 GTF2H5Q6ZYL4 71 aa5.88□□□□□ -1.47
SNRNP40-201ENST00000263694 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
SNRNP40-201ENST00000263694 SNCGO76070 127 aa5.87□□□□□ -1.47
SNRNP40-201ENST00000263694 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
SNRNP40-201ENST00000263694 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.87□□□□□ -1.47
SNRNP40-201ENST00000263694 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
SNRNP40-201ENST00000263694 UBE2V1Q13404 147 aa5.86□□□□□ -1.47
SNRNP40-201ENST00000263694 Q8N377 158 aa5.86□□□□□ -1.47
SNRNP40-201ENST00000263694 ORMDL1Q9P0S3 153 aa5.86□□□□□ -1.47
SNRNP40-201ENST00000263694 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-201ENST00000263694 Q8N1X5 172 aa5.85□□□□□ -1.47
SNRNP40-201ENST00000263694 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
SNRNP40-201ENST00000263694 SPRR4Q96PI1 79 aa5.85□□□□□ -1.47
SNRNP40-201ENST00000263694 PRO0461Q9UI25 63 aa5.85□□□□□ -1.47
SNRNP40-201ENST00000263694 A0A1B0GV72 72 aa5.84□□□□□ -1.48
SNRNP40-201ENST00000263694 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.48
SNRNP40-201ENST00000263694 IGLV5-48A0A075B6I7 105 aa5.83□□□□□ -1.48
SNRNP40-201ENST00000263694 TEX49A0A1B0GTD5 131 aa5.83□□□□□ -1.48
SNRNP40-201ENST00000263694 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
SNRNP40-201ENST00000263694 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
SNRNP40-201ENST00000263694 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
SNRNP40-201ENST00000263694 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
SNRNP40-201ENST00000263694 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
SNRNP40-201ENST00000263694 OCIAD2Q56VL3 154 aa5.81□□□□□ -1.48
SNRNP40-201ENST00000263694 ANKRD29Q8N6D5 301 aa5.81□□□□□ -1.48
SNRNP40-201ENST00000263694 TMEM256-PLSCR3K7ERE1 68 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 SPRR1BP22528 89 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 ZNF706Q9Y5V0 76 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 FLG2Q5D862 2391 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 H3BT86 120 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 LAMTOR3Q9UHA4 124 aa5.8□□□□□ -1.48
SNRNP40-201ENST00000263694 A0A087X002 238 aa5.79□□□□□ -1.48
SNRNP40-201ENST00000263694 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
SNRNP40-201ENST00000263694 A0A0G2JQZ4 141 aa5.79□□□□□ -1.48
SNRNP40-201ENST00000263694 F8W1H4 67 aa5.79□□□□□ -1.48
SNRNP40-201ENST00000263694 ETDBQ3ZM63 59 aa5.77□□□□□ -1.49
SNRNP40-201ENST00000263694 PPDPFLQ8WWR9 84 aa5.77□□□□□ -1.49
SNRNP40-201ENST00000263694 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
SNRNP40-201ENST00000263694 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
SNRNP40-201ENST00000263694 H3BQ85 93 aa5.76□□□□□ -1.49
SNRNP40-201ENST00000263694 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
SNRNP40-201ENST00000263694 MOBPQ13875 183 aa5.75□□□□□ -1.49
SNRNP40-201ENST00000263694 C9orf153Q5TBE3 101 aa5.75□□□□□ -1.49
SNRNP40-201ENST00000263694 F8WEM9 126 aa5.74□□□□□ -1.49
SNRNP40-201ENST00000263694 C14orf132Q9NPU4 83 aa5.74□□□□□ -1.49
SNRNP40-201ENST00000263694 CRYGAP11844 174 aa5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 RBM3P98179 157 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 FAM229BQ4G0N7 80 aa5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 OBSCN-AS1Q96MR7 158 aa5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 HERC2O95714 4834 aa5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-201ENST00000263694 IGLV8-61A0A075B6I0 122 aa5.72□□□□□ -1.49
SNRNP40-201ENST00000263694 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
SNRNP40-201ENST00000263694 JMJD7-PLA2G4BH0Y9G9 81 aa5.71□□□□□ -1.5
SNRNP40-201ENST00000263694 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
SNRNP40-201ENST00000263694 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
SNRNP40-201ENST00000263694 Q8NBF4 154 aa5.7□□□□□ -1.5
SNRNP40-201ENST00000263694 TYMSOSQ8TAI1 123 aa5.7□□□□□ -1.5
SNRNP40-201ENST00000263694 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
SNRNP40-201ENST00000263694 VPS25Q9BRG1 176 aa5.69□□□□□ -1.5
SNRNP40-201ENST00000263694 A0A1W2PNM2 257 aa5.68□□□□□ -1.5
SNRNP40-201ENST00000263694 Q6ZQT0 140 aa5.68□□□□□ -1.5
SNRNP40-201ENST00000263694 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
SNRNP40-201ENST00000263694 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
SNRNP40-201ENST00000263694 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
SNRNP40-201ENST00000263694 Q6JHZ5 121 aa5.67□□□□□ -1.5
SNRNP40-201ENST00000263694 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
SNRNP40-201ENST00000263694 LOC110117498A0A087WWA1 95 aa5.67□□□□□ -1.5
SNRNP40-201ENST00000263694 CCKP06307 115 aa5.67□□□□□ -1.5
SNRNP40-201ENST00000263694 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
SNRNP40-201ENST00000263694 TNXBP22105 4242 aa5.66□□□□□ -1.5
SNRNP40-201ENST00000263694 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SNRNP40-201ENST00000263694 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
SNRNP40-201ENST00000263694 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
SNRNP40-201ENST00000263694 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-201ENST00000263694 PDE6GP18545 87 aa5.63□□□□□ -1.51
SNRNP40-201ENST00000263694 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
SNRNP40-201ENST00000263694 A0A087WSZ3 146 aa5.61□□□□□ -1.51
SNRNP40-201ENST00000263694 TRBV7-7A0A0K0K1E9 115 aa5.61□□□□□ -1.51
SNRNP40-201ENST00000263694 OXTP01178 125 aa5.61□□□□□ -1.51
SNRNP40-201ENST00000263694 Q6Q795 121 aa5.6□□□□□ -1.51
SNRNP40-201ENST00000263694 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-201ENST00000263694 CD164Q04900 197 aa5.59□□□□□ -1.52
SNRNP40-201ENST00000263694 LINC00846Q9NV44 126 aa5.59□□□□□ -1.52
SNRNP40-201ENST00000263694 SPINK1P00995 79 aa5.56□□□□□ -1.52
SNRNP40-201ENST00000263694 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
SNRNP40-201ENST00000263694 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
SNRNP40-201ENST00000263694 J3QR89 54 aa5.55□□□□□ -1.52
SNRNP40-201ENST00000263694 RETNLBQ9BQ08 111 aa5.55□□□□□ -1.52
SNRNP40-201ENST00000263694 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 196.2 ms