RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.76
CROCCP3-201ENST00000263511 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
CROCCP3-201ENST00000263511 LCE6AA0A183 80 aa10.25□□□□□ -0.77
CROCCP3-201ENST00000263511 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
CROCCP3-201ENST00000263511 OXTP01178 125 aa10.23□□□□□ -0.77
CROCCP3-201ENST00000263511 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
CROCCP3-201ENST00000263511 Q5VSD8 79 aa10.22□□□□□ -0.77
CROCCP3-201ENST00000263511 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
CROCCP3-201ENST00000263511 COL6A5A8TX70 2615 aa10.22□□□□□ -0.77
CROCCP3-201ENST00000263511 S4R3F8 94 aa10.21□□□□□ -0.78
CROCCP3-201ENST00000263511 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
CROCCP3-201ENST00000263511 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
CROCCP3-201ENST00000263511 Q5W150 140 aa10.18□□□□□ -0.78
CROCCP3-201ENST00000263511 KRTAP10-1P60331 282 aa10.18□□□□□ -0.78
CROCCP3-201ENST00000263511 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
CROCCP3-201ENST00000263511 SPINK7P58062 85 aa10.17□□□□□ -0.78
CROCCP3-201ENST00000263511 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
CROCCP3-201ENST00000263511 LUZP6Q538Z0 58 aa10.16□□□□□ -0.78
CROCCP3-201ENST00000263511 C5orf42Q9H799 3197 aa10.16□□□□□ -0.78
CROCCP3-201ENST00000263511 Q5VV11 94 aa10.15□□□□□ -0.79
CROCCP3-201ENST00000263511 KRTAP10-2P60368 255 aa10.14□□□□□ -0.79
CROCCP3-201ENST00000263511 ZNF292O60281 2723 aa10.13□□□□□ -0.79
CROCCP3-201ENST00000263511 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
CROCCP3-201ENST00000263511 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
CROCCP3-201ENST00000263511 LINC00483Q53H64 154 aa10.11□□□□□ -0.79
CROCCP3-201ENST00000263511 CHD9Q3L8U1 2897 aa10.11□□□□□ -0.79
CROCCP3-201ENST00000263511 UNC79Q9P2D8 2635 aa10.1□□□□□ -0.79
CROCCP3-201ENST00000263511 PRAC1Q96KF2 57 aa10.08□□□□□ -0.8
CROCCP3-201ENST00000263511 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
CROCCP3-201ENST00000263511 R4GN34 69 aa10.06□□□□□ -0.8
CROCCP3-201ENST00000263511 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
CROCCP3-201ENST00000263511 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
CROCCP3-201ENST00000263511 H3BS24 57 aa10.02□□□□□ -0.81
CROCCP3-201ENST00000263511 Q6ZR54 194 aa10.01□□□□□ -0.81
CROCCP3-201ENST00000263511 GCN1Q92616 2671 aaKnown RBP10□□□□□ -0.81
CROCCP3-201ENST00000263511 BAHCC1Q9P281 2608 aa9.98□□□□□ -0.81
CROCCP3-201ENST00000263511 PANO1I0J062 215 aa9.96□□□□□ -0.81
CROCCP3-201ENST00000263511 RANBP2P49792 3224 aaKnown RBP9.95□□□□□ -0.82
CROCCP3-201ENST00000263511 KRTAP4-16G5E9R7 235 aaPredicted RBP9.94□□□□□ -0.82
CROCCP3-201ENST00000263511 IGSF10Q6WRI0 2623 aa9.9□□□□□ -0.83
CROCCP3-201ENST00000263511 CFAP54Q96N23 3096 aa9.86□□□□□ -0.83
CROCCP3-201ENST00000263511 UBR5O95071 2799 aaPredicted RBP9.86□□□□□ -0.83
CROCCP3-201ENST00000263511 TRANK1O15050 2925 aa9.86□□□□□ -0.83
CROCCP3-201ENST00000263511 A0A087X002 238 aa9.86□□□□□ -0.83
CROCCP3-201ENST00000263511 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
CROCCP3-201ENST00000263511 HTTP42858 3142 aa9.85□□□□□ -0.83
CROCCP3-201ENST00000263511 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
CROCCP3-201ENST00000263511 M0QZ58 72 aa9.84□□□□□ -0.83
CROCCP3-201ENST00000263511 LAMA3Q16787 3333 aa9.84□□□□□ -0.83
CROCCP3-201ENST00000263511 MKI67P46013 3256 aaKnown RBP9.82□□□□□ -0.84
CROCCP3-201ENST00000263511 DSPP15924 2871 aaKnown RBP9.82□□□□□ -0.84
CROCCP3-201ENST00000263511 BRCA2P51587 3418 aa9.8□□□□□ -0.84
CROCCP3-201ENST00000263511 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
CROCCP3-201ENST00000263511 STAB2Q8WWQ8 2551 aa9.79□□□□□ -0.84
CROCCP3-201ENST00000263511 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
CROCCP3-201ENST00000263511 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
CROCCP3-201ENST00000263511 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
CROCCP3-201ENST00000263511 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
CROCCP3-201ENST00000263511 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
CROCCP3-201ENST00000263511 WDFY4Q6ZS81 3184 aa9.74□□□□□ -0.85
CROCCP3-201ENST00000263511 MAP1AP78559 2803 aaPredicted RBP9.73□□□□□ -0.85
CROCCP3-201ENST00000263511 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
CROCCP3-201ENST00000263511 ROMO1P60602 79 aa9.72□□□□□ -0.85
CROCCP3-201ENST00000263511 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
CROCCP3-201ENST00000263511 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.85
CROCCP3-201ENST00000263511 PLAC4Q8WY50 150 aa9.71□□□□□ -0.85
CROCCP3-201ENST00000263511 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
CROCCP3-201ENST00000263511 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
CROCCP3-201ENST00000263511 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
CROCCP3-201ENST00000263511 PRUNE2Q8WUY3 3088 aa9.64□□□□□ -0.87
CROCCP3-201ENST00000263511 SPATA8Q6RVD6 105 aa9.61□□□□□ -0.87
CROCCP3-201ENST00000263511 UNC80Q8N2C7 3258 aa9.61□□□□□ -0.87
CROCCP3-201ENST00000263511 A6NN06 94 aa9.6□□□□□ -0.87
CROCCP3-201ENST00000263511 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
CROCCP3-201ENST00000263511 XIRP2A4UGR9 3374 aa9.58□□□□□ -0.88
CROCCP3-201ENST00000263511 ITPR1Q14643 2758 aa9.58□□□□□ -0.88
CROCCP3-201ENST00000263511 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
CROCCP3-201ENST00000263511 KRTAP7-1Q8IUC3 87 aa9.58□□□□□ -0.88
CROCCP3-201ENST00000263511 KRTAP21-3Q3LHN1 58 aa9.57□□□□□ -0.88
CROCCP3-201ENST00000263511 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
CROCCP3-201ENST00000263511 KRTAP13-1Q8IUC0 172 aa9.52□□□□□ -0.88
CROCCP3-201ENST00000263511 TRIOO75962 3097 aa9.48□□□□□ -0.89
CROCCP3-201ENST00000263511 A8MUU9 505 aa9.45□□□□□ -0.9
CROCCP3-201ENST00000263511 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
CROCCP3-201ENST00000263511 A8MU10 97 aa9.44□□□□□ -0.9
CROCCP3-201ENST00000263511 FLNCQ14315 2725 aa9.44□□□□□ -0.9
CROCCP3-201ENST00000263511 VPS13AQ96RL7 3174 aa9.43□□□□□ -0.9
CROCCP3-201ENST00000263511 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
CROCCP3-201ENST00000263511 TACC2O95359 2948 aa9.39□□□□□ -0.91
CROCCP3-201ENST00000263511 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
CROCCP3-201ENST00000263511 HIVEP1P15822 2718 aa9.38□□□□□ -0.91
CROCCP3-201ENST00000263511 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
CROCCP3-201ENST00000263511 CDH23Q9H251 3354 aa9.36□□□□□ -0.91
CROCCP3-201ENST00000263511 KRTAP25-1Q3LHN0 102 aa9.35□□□□□ -0.91
CROCCP3-201ENST00000263511 UTP20O75691 2785 aaKnown RBP9.35□□□□□ -0.91
CROCCP3-201ENST00000263511 CELSR3Q9NYQ7 3312 aa9.33□□□□□ -0.92
CROCCP3-201ENST00000263511 REV3LO60673 3130 aa9.31□□□□□ -0.92
CROCCP3-201ENST00000263511 ATMQ13315 3056 aa9.27□□□□□ -0.93
CROCCP3-201ENST00000263511 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
CROCCP3-201ENST00000263511 NIPBLQ6KC79 2804 aaeCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms