RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DSCR10P59022 87 aa5.79□□□□□ -1.48
MSH4-201ENST00000263187 A0A087WSZ3 146 aa5.79□□□□□ -1.48
MSH4-201ENST00000263187 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
MSH4-201ENST00000263187 TLX1NBP0CAT3 122 aa5.78□□□□□ -1.48
MSH4-201ENST00000263187 SPRR1AP35321 89 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 TNP2Q05952 138 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
MSH4-201ENST00000263187 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 K7EIL1 84 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
MSH4-201ENST00000263187 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
MSH4-201ENST00000263187 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
MSH4-201ENST00000263187 UBE2DNLQ8IWF7 75 aa5.76□□□□□ -1.49
MSH4-201ENST00000263187 NDUFC1O43677 76 aa5.75□□□□□ -1.49
MSH4-201ENST00000263187 F8WDY8 70 aa5.75□□□□□ -1.49
MSH4-201ENST00000263187 UBE2AP49459 152 aa5.74□□□□□ -1.49
MSH4-201ENST00000263187 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
MSH4-201ENST00000263187 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
MSH4-201ENST00000263187 IGLV5-37A0A075B6J1 123 aa5.73□□□□□ -1.49
MSH4-201ENST00000263187 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
MSH4-201ENST00000263187 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
MSH4-201ENST00000263187 PLECQ15149 4684 aaKnown RBP5.71□□□□□ -1.49
MSH4-201ENST00000263187 TGP01266 2768 aa5.7□□□□□ -1.5
MSH4-201ENST00000263187 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
MSH4-201ENST00000263187 PANO1I0J062 215 aa5.7□□□□□ -1.5
MSH4-201ENST00000263187 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
MSH4-201ENST00000263187 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
MSH4-201ENST00000263187 MEGF8Q7Z7M0 2845 aa5.68□□□□□ -1.5
MSH4-201ENST00000263187 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
MSH4-201ENST00000263187 H0Y9J4 135 aa5.68□□□□□ -1.5
MSH4-201ENST00000263187 PSPHP1O15172 72 aa5.68□□□□□ -1.5
MSH4-201ENST00000263187 ATP5EP56381 51 aaPredicted RBP5.67□□□□□ -1.5
MSH4-201ENST00000263187 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
MSH4-201ENST00000263187 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
MSH4-201ENST00000263187 V9GYY9 64 aa5.65□□□□□ -1.51
MSH4-201ENST00000263187 PRO0628Q9UI54 55 aa5.65□□□□□ -1.51
MSH4-201ENST00000263187 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
MSH4-201ENST00000263187 DYNC2H1Q8NCM8 4307 aaKnown RBP5.64□□□□□ -1.51
MSH4-201ENST00000263187 hDV103S1A0JD37 113 aa5.64□□□□□ -1.51
MSH4-201ENST00000263187 A0A1B0GW54 56 aa5.63□□□□□ -1.51
MSH4-201ENST00000263187 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
MSH4-201ENST00000263187 MP68P56378 58 aa5.63□□□□□ -1.51
MSH4-201ENST00000263187 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
MSH4-201ENST00000263187 H0Y9P7 68 aa5.62□□□□□ -1.51
MSH4-201ENST00000263187 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
MSH4-201ENST00000263187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
MSH4-201ENST00000263187 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
MSH4-201ENST00000263187 LCE6AA0A183 80 aa5.61□□□□□ -1.51
MSH4-201ENST00000263187 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
MSH4-201ENST00000263187 B9D2Q9BPU9 175 aa5.6□□□□□ -1.51
MSH4-201ENST00000263187 PCOTHQ58A44 107 aa5.6□□□□□ -1.51
MSH4-201ENST00000263187 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
MSH4-201ENST00000263187 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
MSH4-201ENST00000263187 FBN3Q75N90 2809 aa5.59□□□□□ -1.51
MSH4-201ENST00000263187 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
MSH4-201ENST00000263187 NDUFS5O43920 106 aa5.58□□□□□ -1.52
MSH4-201ENST00000263187 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
MSH4-201ENST00000263187 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
MSH4-201ENST00000263187 IGLV8-61A0A075B6I0 122 aa5.57□□□□□ -1.52
MSH4-201ENST00000263187 NBDYA0A0U1RRE5 68 aa5.57□□□□□ -1.52
MSH4-201ENST00000263187 A8MU10 97 aa5.57□□□□□ -1.52
MSH4-201ENST00000263187 A8MUN3 132 aa5.57□□□□□ -1.52
MSH4-201ENST00000263187 A8MWP4 228 aa5.57□□□□□ -1.52
MSH4-201ENST00000263187 IGHV6-1A0A0B4J1U7 121 aa5.56□□□□□ -1.52
MSH4-201ENST00000263187 C14orf177Q52M58 125 aa5.56□□□□□ -1.52
MSH4-201ENST00000263187 C4orf48Q5BLP8 95 aa5.56□□□□□ -1.52
MSH4-201ENST00000263187 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
MSH4-201ENST00000263187 HECTD4Q9Y4D8 3996 aa5.55□□□□□ -1.52
MSH4-201ENST00000263187 MOBPQ13875 183 aa5.54□□□□□ -1.52
MSH4-201ENST00000263187 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
MSH4-201ENST00000263187 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
MSH4-201ENST00000263187 MMP24-AS1A0A0U1RRL7 71 aa5.53□□□□□ -1.52
MSH4-201ENST00000263187 NDUFB1O75438 58 aa5.53□□□□□ -1.52
MSH4-201ENST00000263187 A0A087X002 238 aa5.52□□□□□ -1.53
MSH4-201ENST00000263187 NOTCH2NLQ7Z3S9 236 aa5.52□□□□□ -1.53
MSH4-201ENST00000263187 SPRR1BP22528 89 aa5.51□□□□□ -1.53
MSH4-201ENST00000263187 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
MSH4-201ENST00000263187 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
MSH4-201ENST00000263187 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
MSH4-201ENST00000263187 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
MSH4-201ENST00000263187 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
MSH4-201ENST00000263187 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
MSH4-201ENST00000263187 Q1T7F1 81 aa5.5□□□□□ -1.53
MSH4-201ENST00000263187 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
MSH4-201ENST00000263187 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
MSH4-201ENST00000263187 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
MSH4-201ENST00000263187 Q96NJ1 140 aa5.49□□□□□ -1.53
MSH4-201ENST00000263187 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
MSH4-201ENST00000263187 A0A087WTM6 91 aa5.48□□□□□ -1.53
MSH4-201ENST00000263187 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
MSH4-201ENST00000263187 RTL8CO15255 209 aa5.48□□□□□ -1.53
MSH4-201ENST00000263187 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
MSH4-201ENST00000263187 CD164Q04900 197 aa5.47□□□□□ -1.53
MSH4-201ENST00000263187 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
MSH4-201ENST00000263187 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
MSH4-201ENST00000263187 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
MSH4-201ENST00000263187 COA5Q86WW8 74 aa5.47□□□□□ -1.53
MSH4-201ENST00000263187 SPAG11AQ6PDA7 123 aa5.46□□□□□ -1.54
MSH4-201ENST00000263187 Q5VV11 94 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms