RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
SGCA-201ENST00000262018 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
SGCA-201ENST00000262018 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
SGCA-201ENST00000262018 PANO1I0J062 215 aa8.23□□□□□ -1.09
SGCA-201ENST00000262018 LINC00643Q86TS7 51 aa8.23□□□□□ -1.09
SGCA-201ENST00000262018 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
SGCA-201ENST00000262018 SPRR1AP35321 89 aa8.22□□□□□ -1.09
SGCA-201ENST00000262018 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
SGCA-201ENST00000262018 LPAP08519 4548 aa8.22□□□□□ -1.09
SGCA-201ENST00000262018 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
SGCA-201ENST00000262018 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
SGCA-201ENST00000262018 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
SGCA-201ENST00000262018 KRTAP10-8P60410 259 aa8.19□□□□□ -1.1
SGCA-201ENST00000262018 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
SGCA-201ENST00000262018 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
SGCA-201ENST00000262018 B5MCH6 92 aa8.18□□□□□ -1.1
SGCA-201ENST00000262018 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
SGCA-201ENST00000262018 CCKP06307 115 aa8.18□□□□□ -1.1
SGCA-201ENST00000262018 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
SGCA-201ENST00000262018 A0A1B0GV72 72 aa8.17□□□□□ -1.1
SGCA-201ENST00000262018 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
SGCA-201ENST00000262018 RBM3P98179 157 aaKnown RBP8.17□□□□□ -1.1
SGCA-201ENST00000262018 ATP5EP2Q5VTU8 51 aa8.17□□□□□ -1.1
SGCA-201ENST00000262018 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
SGCA-201ENST00000262018 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
SGCA-201ENST00000262018 Q6ZQY7 126 aa8.16□□□□□ -1.1
SGCA-201ENST00000262018 Q6ZRX8 168 aa8.16□□□□□ -1.1
SGCA-201ENST00000262018 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
SGCA-201ENST00000262018 MUC2Q02817 5179 aa8.15□□□□□ -1.1
SGCA-201ENST00000262018 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
SGCA-201ENST00000262018 C14orf132Q9NPU4 83 aa8.14□□□□□ -1.11
SGCA-201ENST00000262018 A0A1B0GW54 56 aa8.13□□□□□ -1.11
SGCA-201ENST00000262018 LAMTOR3Q9UHA4 124 aa8.13□□□□□ -1.11
SGCA-201ENST00000262018 UBE2BP63146 152 aa8.12□□□□□ -1.11
SGCA-201ENST00000262018 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
SGCA-201ENST00000262018 Q9BRP9 147 aa8.12□□□□□ -1.11
SGCA-201ENST00000262018 LCE2AQ5TA79 106 aaPredicted RBP8.12□□□□□ -1.11
SGCA-201ENST00000262018 Q6JHZ5 121 aa8.11□□□□□ -1.11
SGCA-201ENST00000262018 UBL5Q9BZL1 73 aa8.1□□□□□ -1.11
SGCA-201ENST00000262018 Q6ZQT0 140 aa8.09□□□□□ -1.11
SGCA-201ENST00000262018 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
SGCA-201ENST00000262018 H0Y9J4 135 aa8.08□□□□□ -1.12
SGCA-201ENST00000262018 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
SGCA-201ENST00000262018 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
SGCA-201ENST00000262018 TRBV7-4A0A0J9YYF1 115 aa8.06□□□□□ -1.12
SGCA-201ENST00000262018 ERC2-IT1O76042 136 aa8.06□□□□□ -1.12
SGCA-201ENST00000262018 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
SGCA-201ENST00000262018 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
SGCA-201ENST00000262018 IGLV5-48A0A075B6I7 105 aa8.05□□□□□ -1.12
SGCA-201ENST00000262018 BCE1O60756 84 aa8.05□□□□□ -1.12
SGCA-201ENST00000262018 PRLHP81277 87 aa8.05□□□□□ -1.12
SGCA-201ENST00000262018 Q8N377 158 aa8.05□□□□□ -1.12
SGCA-201ENST00000262018 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
SGCA-201ENST00000262018 LINC00846Q9NV44 126 aa8.04□□□□□ -1.12
SGCA-201ENST00000262018 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
SGCA-201ENST00000262018 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
SGCA-201ENST00000262018 UBE2AP49459 152 aa8.02□□□□□ -1.13
SGCA-201ENST00000262018 DEFB105AQ8NG35 78 aa8.02□□□□□ -1.13
SGCA-201ENST00000262018 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
SGCA-201ENST00000262018 CXCL6P80162 114 aa8□□□□□ -1.13
SGCA-201ENST00000262018 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
SGCA-201ENST00000262018 ATOX1O00244 68 aa7.99□□□□□ -1.13
SGCA-201ENST00000262018 SPRR1BP22528 89 aa7.96□□□□□ -1.13
SGCA-201ENST00000262018 HIST1H4AP62805 103 aaKnown RBP7.96□□□□□ -1.13
SGCA-201ENST00000262018 PRR4Q16378 134 aa7.96□□□□□ -1.13
SGCA-201ENST00000262018 C1orf137Q5JT78 98 aa7.96□□□□□ -1.13
SGCA-201ENST00000262018 SMIM29Q86T20 159 aa7.96□□□□□ -1.13
SGCA-201ENST00000262018 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.13
SGCA-201ENST00000262018 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
SGCA-201ENST00000262018 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
SGCA-201ENST00000262018 F8WEM9 126 aa7.95□□□□□ -1.14
SGCA-201ENST00000262018 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
SGCA-201ENST00000262018 ZNF861PO60384 105 aa7.93□□□□□ -1.14
SGCA-201ENST00000262018 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
SGCA-201ENST00000262018 Q6ZVQ6 151 aa7.93□□□□□ -1.14
SGCA-201ENST00000262018 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
SGCA-201ENST00000262018 SMIM20Q8N5G0 67 aa7.92□□□□□ -1.14
SGCA-201ENST00000262018 IGLV8-61A0A075B6I0 122 aa7.91□□□□□ -1.14
SGCA-201ENST00000262018 UQCRQO14949 82 aa7.89□□□□□ -1.15
SGCA-201ENST00000262018 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
SGCA-201ENST00000262018 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
SGCA-201ENST00000262018 ZNF706Q9Y5V0 76 aaPredicted RBP7.89□□□□□ -1.15
SGCA-201ENST00000262018 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
SGCA-201ENST00000262018 LINC00483Q53H64 154 aa7.88□□□□□ -1.15
SGCA-201ENST00000262018 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
SGCA-201ENST00000262018 NREPQ16612 68 aa7.87□□□□□ -1.15
SGCA-201ENST00000262018 Q8NBF4 154 aa7.87□□□□□ -1.15
SGCA-201ENST00000262018 A0A1W2PNM2 257 aa7.85□□□□□ -1.15
SGCA-201ENST00000262018 COX7CP15954 63 aa7.85□□□□□ -1.15
SGCA-201ENST00000262018 CRYGAP11844 174 aa7.84□□□□□ -1.15
SGCA-201ENST00000262018 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
SGCA-201ENST00000262018 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
SGCA-201ENST00000262018 BPY2O14599 106 aa7.81□□□□□ -1.16
SGCA-201ENST00000262018 A0A0G2JQZ4 141 aa7.78□□□□□ -1.16
SGCA-201ENST00000262018 A0A087WVE0 104 aa7.77□□□□□ -1.17
SGCA-201ENST00000262018 C9orf153Q5TBE3 101 aa7.77□□□□□ -1.17
SGCA-201ENST00000262018 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
SGCA-201ENST00000262018 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
SGCA-201ENST00000262018 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
SGCA-201ENST00000262018 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms