RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
SFSWAP-201ENST00000261674 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
SFSWAP-201ENST00000261674 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
SFSWAP-201ENST00000261674 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
SFSWAP-201ENST00000261674 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
SFSWAP-201ENST00000261674 DSCR10P59022 87 aa9.2□□□□□ -0.94
SFSWAP-201ENST00000261674 STARD9Q9P2P6 4700 aa9.2□□□□□ -0.94
SFSWAP-201ENST00000261674 A0A087WSZ3 146 aa9.2□□□□□ -0.94
SFSWAP-201ENST00000261674 SPRR1AP35321 89 aa9.19□□□□□ -0.94
SFSWAP-201ENST00000261674 BRK1Q8WUW1 75 aa9.18□□□□□ -0.94
SFSWAP-201ENST00000261674 PLECQ15149 4684 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-201ENST00000261674 RPL37AP61513 92 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-201ENST00000261674 TNP2Q05952 138 aa9.18□□□□□ -0.94
SFSWAP-201ENST00000261674 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
SFSWAP-201ENST00000261674 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
SFSWAP-201ENST00000261674 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
SFSWAP-201ENST00000261674 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
SFSWAP-201ENST00000261674 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
SFSWAP-201ENST00000261674 UBE2AP49459 152 aa9.14□□□□□ -0.95
SFSWAP-201ENST00000261674 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
SFSWAP-201ENST00000261674 IGLV5-37A0A075B6J1 123 aa9.13□□□□□ -0.95
SFSWAP-201ENST00000261674 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
SFSWAP-201ENST00000261674 DNAH10Q8IVF4 4471 aa9.13□□□□□ -0.95
SFSWAP-201ENST00000261674 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
SFSWAP-201ENST00000261674 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
SFSWAP-201ENST00000261674 A0A1B0GW54 56 aa9.09□□□□□ -0.96
SFSWAP-201ENST00000261674 LY6G6CO95867 125 aa9.09□□□□□ -0.96
SFSWAP-201ENST00000261674 PRO0628Q9UI54 55 aa9.09□□□□□ -0.96
SFSWAP-201ENST00000261674 LINC00208Q96KT6 92 aa9.08□□□□□ -0.96
SFSWAP-201ENST00000261674 KMT2AQ03164 3969 aa9.08□□□□□ -0.96
SFSWAP-201ENST00000261674 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
SFSWAP-201ENST00000261674 C1orf64Q8NEQ6 169 aa9.07□□□□□ -0.96
SFSWAP-201ENST00000261674 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
SFSWAP-201ENST00000261674 KRTAP11-1Q8IUC1 163 aa9.06□□□□□ -0.96
SFSWAP-201ENST00000261674 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
SFSWAP-201ENST00000261674 MP68P56378 58 aa9.04□□□□□ -0.96
SFSWAP-201ENST00000261674 H0Y9J4 135 aa9.03□□□□□ -0.96
SFSWAP-201ENST00000261674 PSPHP1O15172 72 aa9.03□□□□□ -0.96
SFSWAP-201ENST00000261674 hDV103S1A0JD37 113 aa9.01□□□□□ -0.97
SFSWAP-201ENST00000261674 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
SFSWAP-201ENST00000261674 CASC2Q6XLA1 102 aa9□□□□□ -0.97
SFSWAP-201ENST00000261674 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
SFSWAP-201ENST00000261674 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
SFSWAP-201ENST00000261674 H0Y9P7 68 aa8.97□□□□□ -0.97
SFSWAP-201ENST00000261674 DNAH1Q9P2D7 4330 aa8.97□□□□□ -0.97
SFSWAP-201ENST00000261674 LCE6AA0A183 80 aa8.96□□□□□ -0.98
SFSWAP-201ENST00000261674 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
SFSWAP-201ENST00000261674 PANO1I0J062 215 aa8.94□□□□□ -0.98
SFSWAP-201ENST00000261674 WWC2-AS2Q96NR7 200 aa8.94□□□□□ -0.98
SFSWAP-201ENST00000261674 PRR15Q8IV56 129 aa8.93□□□□□ -0.98
SFSWAP-201ENST00000261674 HYDINQ4G0P3 5121 aa8.93□□□□□ -0.98
SFSWAP-201ENST00000261674 NDUFB1O75438 58 aa8.92□□□□□ -0.98
SFSWAP-201ENST00000261674 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
SFSWAP-201ENST00000261674 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
SFSWAP-201ENST00000261674 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
SFSWAP-201ENST00000261674 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.98
SFSWAP-201ENST00000261674 A8MWP4 228 aa8.9□□□□□ -0.99
SFSWAP-201ENST00000261674 NDUFS5O43920 106 aa8.89□□□□□ -0.99
SFSWAP-201ENST00000261674 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
SFSWAP-201ENST00000261674 C9orf163Q8N9P6 203 aa8.89□□□□□ -0.99
SFSWAP-201ENST00000261674 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
SFSWAP-201ENST00000261674 A8MUN3 132 aa8.88□□□□□ -0.99
SFSWAP-201ENST00000261674 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
SFSWAP-201ENST00000261674 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
SFSWAP-201ENST00000261674 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
SFSWAP-201ENST00000261674 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
SFSWAP-201ENST00000261674 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SFSWAP-201ENST00000261674 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
SFSWAP-201ENST00000261674 IGHV6-1A0A0B4J1U7 121 aa8.83□□□□□ -1
SFSWAP-201ENST00000261674 Q1T7F1 81 aa8.82□□□□□ -1
SFSWAP-201ENST00000261674 DNAH2Q9P225 4427 aa8.81□□□□□ -1
SFSWAP-201ENST00000261674 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
SFSWAP-201ENST00000261674 SPRR1BP22528 89 aa8.81□□□□□ -1
SFSWAP-201ENST00000261674 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
SFSWAP-201ENST00000261674 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
SFSWAP-201ENST00000261674 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
SFSWAP-201ENST00000261674 MOBPQ13875 183 aa8.79□□□□□ -1
SFSWAP-201ENST00000261674 DYNC2H1Q8NCM8 4307 aaKnown RBP8.79□□□□□ -1
SFSWAP-201ENST00000261674 CDK2AP2O75956 126 aa8.79□□□□□ -1
SFSWAP-201ENST00000261674 A8MU10 97 aa8.78□□□□□ -1
SFSWAP-201ENST00000261674 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
SFSWAP-201ENST00000261674 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
SFSWAP-201ENST00000261674 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
SFSWAP-201ENST00000261674 H3BPC8 53 aa8.73□□□□□ -1.01
SFSWAP-201ENST00000261674 Q6ZRN7 208 aaPredicted RBP8.73□□□□□ -1.01
SFSWAP-201ENST00000261674 COA5Q86WW8 74 aa8.73□□□□□ -1.01
SFSWAP-201ENST00000261674 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
SFSWAP-201ENST00000261674 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
SFSWAP-201ENST00000261674 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.01
SFSWAP-201ENST00000261674 V9GYY9 64 aa8.71□□□□□ -1.01
SFSWAP-201ENST00000261674 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.02
SFSWAP-201ENST00000261674 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
SFSWAP-201ENST00000261674 A0A087WTM6 91 aa8.71□□□□□ -1.02
SFSWAP-201ENST00000261674 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.02
SFSWAP-201ENST00000261674 A0A087X002 238 aa8.7□□□□□ -1.02
SFSWAP-201ENST00000261674 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
SFSWAP-201ENST00000261674 SPACA4Q8TDM5 124 aa8.7□□□□□ -1.02
SFSWAP-201ENST00000261674 Q5VV11 94 aa8.7□□□□□ -1.02
SFSWAP-201ENST00000261674 Q6ZR54 194 aa8.69□□□□□ -1.02
SFSWAP-201ENST00000261674 Q96NJ1 140 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms