RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 H3BQ85 93 aa9.35□□□□□ -0.91
GYPC-201ENST00000259254 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
GYPC-201ENST00000259254 TMEM256-PLSCR3K7ERE1 68 aa9.34□□□□□ -0.91
GYPC-201ENST00000259254 SPRR1BP22528 89 aa9.34□□□□□ -0.91
GYPC-201ENST00000259254 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
GYPC-201ENST00000259254 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
GYPC-201ENST00000259254 LAMTOR3Q9UHA4 124 aa9.33□□□□□ -0.92
GYPC-201ENST00000259254 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
GYPC-201ENST00000259254 F8WEM9 126 aa9.32□□□□□ -0.92
GYPC-201ENST00000259254 J3QL48 77 aa9.32□□□□□ -0.92
GYPC-201ENST00000259254 H3BT86 120 aa9.31□□□□□ -0.92
GYPC-201ENST00000259254 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
GYPC-201ENST00000259254 IGLV9-49A0A0B4J1Y8 123 aa9.3□□□□□ -0.92
GYPC-201ENST00000259254 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
GYPC-201ENST00000259254 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
GYPC-201ENST00000259254 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 A0A1B0GV72 72 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 CRYGAP11844 174 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
GYPC-201ENST00000259254 FAM229BQ4G0N7 80 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
GYPC-201ENST00000259254 PRO0461Q9UI25 63 aa9.28□□□□□ -0.92
GYPC-201ENST00000259254 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
GYPC-201ENST00000259254 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
GYPC-201ENST00000259254 F8W1H4 67 aa9.26□□□□□ -0.93
GYPC-201ENST00000259254 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
GYPC-201ENST00000259254 A0A087X002 238 aa9.25□□□□□ -0.93
GYPC-201ENST00000259254 MOBPQ13875 183 aa9.25□□□□□ -0.93
GYPC-201ENST00000259254 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
GYPC-201ENST00000259254 OXTP01178 125 aa9.24□□□□□ -0.93
GYPC-201ENST00000259254 Q8NBF4 154 aa9.23□□□□□ -0.93
GYPC-201ENST00000259254 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
GYPC-201ENST00000259254 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.94
GYPC-201ENST00000259254 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.94
GYPC-201ENST00000259254 RBM3P98179 157 aaKnown RBP9.2□□□□□ -0.94
GYPC-201ENST00000259254 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
GYPC-201ENST00000259254 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
GYPC-201ENST00000259254 Q6JHZ5 121 aa9.18□□□□□ -0.94
GYPC-201ENST00000259254 DSCR8Q96T75 97 aa9.18□□□□□ -0.94
GYPC-201ENST00000259254 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
GYPC-201ENST00000259254 SSBP3-AS1Q7Z2R9 100 aa9.17□□□□□ -0.94
GYPC-201ENST00000259254 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
GYPC-201ENST00000259254 TEN1Q86WV5 123 aa9.16□□□□□ -0.94
GYPC-201ENST00000259254 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
GYPC-201ENST00000259254 IGFL1Q6UW32 110 aa9.15□□□□□ -0.94
GYPC-201ENST00000259254 OBSCN-AS1Q96MR7 158 aa9.14□□□□□ -0.95
GYPC-201ENST00000259254 VPS25Q9BRG1 176 aa9.13□□□□□ -0.95
GYPC-201ENST00000259254 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
GYPC-201ENST00000259254 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
GYPC-201ENST00000259254 TRBV7-4A0A0J9YYF1 115 aa9.11□□□□□ -0.95
GYPC-201ENST00000259254 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 CCKP06307 115 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 PDE6GP18545 87 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
GYPC-201ENST00000259254 Q6ZQT0 140 aa9.08□□□□□ -0.96
GYPC-201ENST00000259254 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
GYPC-201ENST00000259254 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
GYPC-201ENST00000259254 CD164Q04900 197 aa9.05□□□□□ -0.96
GYPC-201ENST00000259254 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
GYPC-201ENST00000259254 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
GYPC-201ENST00000259254 TRBV7-7A0A0K0K1E9 115 aa9.03□□□□□ -0.96
GYPC-201ENST00000259254 SPINK1P00995 79 aa9.02□□□□□ -0.97
GYPC-201ENST00000259254 Q6Q795 121 aa9.02□□□□□ -0.97
GYPC-201ENST00000259254 TNXBP22105 4242 aa9.01□□□□□ -0.97
GYPC-201ENST00000259254 A0A087WSZ3 146 aa9.01□□□□□ -0.97
GYPC-201ENST00000259254 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
GYPC-201ENST00000259254 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
GYPC-201ENST00000259254 A0A1B0GW54 56 aa8.95□□□□□ -0.98
GYPC-201ENST00000259254 J3QR89 54 aa8.95□□□□□ -0.98
GYPC-201ENST00000259254 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
GYPC-201ENST00000259254 ACYP1P07311 99 aa8.9□□□□□ -0.98
GYPC-201ENST00000259254 NREPQ16612 68 aa8.9□□□□□ -0.98
GYPC-201ENST00000259254 Q5XG85 94 aa8.9□□□□□ -0.98
GYPC-201ENST00000259254 LINC00846Q9NV44 126 aa8.9□□□□□ -0.98
GYPC-201ENST00000259254 FAM240AA0A1B0GVK7 77 aa8.88□□□□□ -0.99
GYPC-201ENST00000259254 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
GYPC-201ENST00000259254 K7ERU9 68 aa8.87□□□□□ -0.99
GYPC-201ENST00000259254 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
GYPC-201ENST00000259254 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
GYPC-201ENST00000259254 C1orf195Q5TG92 126 aa8.85□□□□□ -0.99
GYPC-201ENST00000259254 Q6ZVQ6 151 aa8.85□□□□□ -0.99
GYPC-201ENST00000259254 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
GYPC-201ENST00000259254 UBR4Q5T4S7 5183 aa8.84□□□□□ -1
GYPC-201ENST00000259254 IGKV4-1P06312 121 aa8.82□□□□□ -1
GYPC-201ENST00000259254 SIGMAR1Q99720 223 aa8.82□□□□□ -1
GYPC-201ENST00000259254 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
GYPC-201ENST00000259254 Q96NJ1 140 aa8.81□□□□□ -1
GYPC-201ENST00000259254 J3KT08 172 aa8.79□□□□□ -1
GYPC-201ENST00000259254 BPY2O14599 106 aa8.79□□□□□ -1
GYPC-201ENST00000259254 PRR4Q16378 134 aa8.79□□□□□ -1
GYPC-201ENST00000259254 LRP2P98164 4655 aa8.79□□□□□ -1
GYPC-201ENST00000259254 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
GYPC-201ENST00000259254 IGLV7-46A0A075B6I9 117 aa8.73□□□□□ -1.01
GYPC-201ENST00000259254 LINC00643Q86TS7 51 aa8.73□□□□□ -1.01
GYPC-201ENST00000259254 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
GYPC-201ENST00000259254 NDUFB1O75438 58 aa8.72□□□□□ -1.01
GYPC-201ENST00000259254 A8MWP4 228 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms