RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
COPB1-201ENST00000249923 SPRR1AP35321 89 aa6.47□□□□□ -1.37
COPB1-201ENST00000249923 Q6ZRX8 168 aa6.47□□□□□ -1.37
COPB1-201ENST00000249923 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.37
COPB1-201ENST00000249923 KRTAP1-5Q9BYS1 174 aa6.46□□□□□ -1.37
COPB1-201ENST00000249923 TNP2Q05952 138 aa6.46□□□□□ -1.38
COPB1-201ENST00000249923 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
COPB1-201ENST00000249923 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
COPB1-201ENST00000249923 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
COPB1-201ENST00000249923 A8MUN3 132 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 STARD9Q9P2P6 4700 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 F8WDY8 70 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
COPB1-201ENST00000249923 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
COPB1-201ENST00000249923 K7EIL1 84 aa6.44□□□□□ -1.38
COPB1-201ENST00000249923 SEC61GP60059 68 aa6.44□□□□□ -1.38
COPB1-201ENST00000249923 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
COPB1-201ENST00000249923 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
COPB1-201ENST00000249923 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
COPB1-201ENST00000249923 EPM2AB3EWF7 344 aa6.43□□□□□ -1.38
COPB1-201ENST00000249923 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
COPB1-201ENST00000249923 BCE1O60756 84 aa6.42□□□□□ -1.38
COPB1-201ENST00000249923 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
COPB1-201ENST00000249923 PRKDCP78527 4128 aaKnown RBP6.41□□□□□ -1.38
COPB1-201ENST00000249923 UBE2AP49459 152 aa6.41□□□□□ -1.38
COPB1-201ENST00000249923 KMT2AQ03164 3969 aa6.41□□□□□ -1.38
COPB1-201ENST00000249923 A6NED7 52 aa6.4□□□□□ -1.38
COPB1-201ENST00000249923 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
COPB1-201ENST00000249923 HCG22E2RYF7 251 aa6.4□□□□□ -1.39
COPB1-201ENST00000249923 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.39
COPB1-201ENST00000249923 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
COPB1-201ENST00000249923 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
COPB1-201ENST00000249923 A8MU10 97 aa6.38□□□□□ -1.39
COPB1-201ENST00000249923 LINC00476Q8WZB0 136 aa6.38□□□□□ -1.39
COPB1-201ENST00000249923 UBE2DNLQ8IWF7 75 aa6.38□□□□□ -1.39
COPB1-201ENST00000249923 Q8NBF4 154 aa6.37□□□□□ -1.39
COPB1-201ENST00000249923 FBN3Q75N90 2809 aa6.37□□□□□ -1.39
COPB1-201ENST00000249923 IGLV9-49A0A0B4J1Y8 123 aa6.37□□□□□ -1.39
COPB1-201ENST00000249923 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
COPB1-201ENST00000249923 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
COPB1-201ENST00000249923 H0Y9P7 68 aa6.36□□□□□ -1.39
COPB1-201ENST00000249923 SPRR4Q96PI1 79 aa6.36□□□□□ -1.39
COPB1-201ENST00000249923 DSCR10P59022 87 aa6.35□□□□□ -1.39
COPB1-201ENST00000249923 CHTF8P0CG12 524 aa6.35□□□□□ -1.39
COPB1-201ENST00000249923 CASC2Q6XLA1 102 aa6.35□□□□□ -1.39
COPB1-201ENST00000249923 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
COPB1-201ENST00000249923 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
COPB1-201ENST00000249923 B9D2Q9BPU9 175 aa6.34□□□□□ -1.39
COPB1-201ENST00000249923 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
COPB1-201ENST00000249923 SPAG11AQ6PDA7 123 aa6.33□□□□□ -1.4
COPB1-201ENST00000249923 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
COPB1-201ENST00000249923 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
COPB1-201ENST00000249923 CNBPP62633 177 aaKnown RBP6.31□□□□□ -1.4
COPB1-201ENST00000249923 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
COPB1-201ENST00000249923 C16orf90A8MZG2 172 aa6.31□□□□□ -1.4
COPB1-201ENST00000249923 MEGF8Q7Z7M0 2845 aa6.3□□□□□ -1.4
COPB1-201ENST00000249923 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
COPB1-201ENST00000249923 PANO1I0J062 215 aa6.3□□□□□ -1.4
COPB1-201ENST00000249923 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
COPB1-201ENST00000249923 NDUFB1O75438 58 aa6.29□□□□□ -1.4
COPB1-201ENST00000249923 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
COPB1-201ENST00000249923 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
COPB1-201ENST00000249923 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
COPB1-201ENST00000249923 LCE6AA0A183 80 aa6.28□□□□□ -1.4
COPB1-201ENST00000249923 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
COPB1-201ENST00000249923 A0A1B0GW54 56 aa6.27□□□□□ -1.41
COPB1-201ENST00000249923 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
COPB1-201ENST00000249923 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
COPB1-201ENST00000249923 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
COPB1-201ENST00000249923 ANAPC11Q9NYG5 84 aa6.24□□□□□ -1.41
COPB1-201ENST00000249923 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
COPB1-201ENST00000249923 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
COPB1-201ENST00000249923 TGP01266 2768 aa6.21□□□□□ -1.42
COPB1-201ENST00000249923 COA5Q86WW8 74 aa6.2□□□□□ -1.42
COPB1-201ENST00000249923 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
COPB1-201ENST00000249923 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
COPB1-201ENST00000249923 MDFIQ99750 246 aa6.2□□□□□ -1.42
COPB1-201ENST00000249923 SPRR1BP22528 89 aa6.19□□□□□ -1.42
COPB1-201ENST00000249923 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
COPB1-201ENST00000249923 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
COPB1-201ENST00000249923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
COPB1-201ENST00000249923 DNAH5Q8TE73 4624 aa6.18□□□□□ -1.42
COPB1-201ENST00000249923 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
COPB1-201ENST00000249923 Q1T7F1 81 aa6.18□□□□□ -1.42
COPB1-201ENST00000249923 NBDYA0A0U1RRE5 68 aa6.17□□□□□ -1.42
COPB1-201ENST00000249923 Q5VV11 94 aa6.17□□□□□ -1.42
COPB1-201ENST00000249923 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
COPB1-201ENST00000249923 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
COPB1-201ENST00000249923 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.42
COPB1-201ENST00000249923 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.43
COPB1-201ENST00000249923 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
COPB1-201ENST00000249923 MOBPQ13875 183 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 A8MWP4 228 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 Q96NJ1 140 aa6.13□□□□□ -1.43
COPB1-201ENST00000249923 HYDINQ4G0P3 5121 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms