RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RYR2Q92736 4967 aa8.67□□□□□ -1.02
SDF2-201ENST00000247020 A0A1B0GW54 56 aa8.66□□□□□ -1.02
SDF2-201ENST00000247020 C3orf22Q8N5N4 141 aa8.66□□□□□ -1.02
SDF2-201ENST00000247020 LINC00483Q53H64 154 aa8.65□□□□□ -1.03
SDF2-201ENST00000247020 SPRR4Q96PI1 79 aa8.65□□□□□ -1.03
SDF2-201ENST00000247020 SIGMAR1Q99720 223 aa8.65□□□□□ -1.03
SDF2-201ENST00000247020 XGP55808 180 aa8.62□□□□□ -1.03
SDF2-201ENST00000247020 LINC00643Q86TS7 51 aa8.62□□□□□ -1.03
SDF2-201ENST00000247020 LINC00846Q9NV44 126 aa8.62□□□□□ -1.03
SDF2-201ENST00000247020 Q6JHZ5 121 aa8.61□□□□□ -1.03
SDF2-201ENST00000247020 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
SDF2-201ENST00000247020 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
SDF2-201ENST00000247020 KMT2CQ8NEZ4 4911 aaKnown RBP8.6□□□□□ -1.03
SDF2-201ENST00000247020 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
SDF2-201ENST00000247020 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
SDF2-201ENST00000247020 Q8NBF4 154 aa8.59□□□□□ -1.03
SDF2-201ENST00000247020 MT-ATP8P03928 68 aa8.57□□□□□ -1.04
SDF2-201ENST00000247020 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
SDF2-201ENST00000247020 HAMPP81172 84 aa8.56□□□□□ -1.04
SDF2-201ENST00000247020 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
SDF2-201ENST00000247020 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
SDF2-201ENST00000247020 Q6Q795 121 aa8.55□□□□□ -1.04
SDF2-201ENST00000247020 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
SDF2-201ENST00000247020 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
SDF2-201ENST00000247020 PKHD1P08F94 4074 aa8.54□□□□□ -1.04
SDF2-201ENST00000247020 TRBV7-7A0A0K0K1E9 115 aa8.54□□□□□ -1.04
SDF2-201ENST00000247020 CRYGAP11844 174 aa8.54□□□□□ -1.04
SDF2-201ENST00000247020 PCP4P48539 62 aa8.54□□□□□ -1.04
SDF2-201ENST00000247020 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
SDF2-201ENST00000247020 Q6ZVQ6 151 aa8.52□□□□□ -1.04
SDF2-201ENST00000247020 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
SDF2-201ENST00000247020 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
SDF2-201ENST00000247020 FAM229BQ4G0N7 80 aa8.49□□□□□ -1.05
SDF2-201ENST00000247020 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
SDF2-201ENST00000247020 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
SDF2-201ENST00000247020 NREPQ16612 68 aa8.48□□□□□ -1.05
SDF2-201ENST00000247020 CXCL6P80162 114 aa8.48□□□□□ -1.05
SDF2-201ENST00000247020 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
SDF2-201ENST00000247020 MOBPQ13875 183 aa8.45□□□□□ -1.06
SDF2-201ENST00000247020 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
SDF2-201ENST00000247020 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
SDF2-201ENST00000247020 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
SDF2-201ENST00000247020 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
SDF2-201ENST00000247020 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
SDF2-201ENST00000247020 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
SDF2-201ENST00000247020 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
SDF2-201ENST00000247020 A0A087WSZ3 146 aa8.42□□□□□ -1.06
SDF2-201ENST00000247020 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
SDF2-201ENST00000247020 CD164Q04900 197 aa8.42□□□□□ -1.06
SDF2-201ENST00000247020 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
SDF2-201ENST00000247020 RYR3Q15413 4870 aa8.4□□□□□ -1.06
SDF2-201ENST00000247020 BPY2O14599 106 aa8.39□□□□□ -1.07
SDF2-201ENST00000247020 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
SDF2-201ENST00000247020 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
SDF2-201ENST00000247020 A0A087X002 238 aa8.37□□□□□ -1.07
SDF2-201ENST00000247020 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
SDF2-201ENST00000247020 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
SDF2-201ENST00000247020 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
SDF2-201ENST00000247020 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
SDF2-201ENST00000247020 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
SDF2-201ENST00000247020 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
SDF2-201ENST00000247020 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
SDF2-201ENST00000247020 J3KT08 172 aa8.32□□□□□ -1.08
SDF2-201ENST00000247020 A0A087WVE0 104 aa8.31□□□□□ -1.08
SDF2-201ENST00000247020 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
SDF2-201ENST00000247020 HRCT1Q6UXD1 115 aa8.31□□□□□ -1.08
SDF2-201ENST00000247020 DSCR10P59022 87 aa8.3□□□□□ -1.08
SDF2-201ENST00000247020 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
SDF2-201ENST00000247020 Q5XG85 94 aa8.3□□□□□ -1.08
SDF2-201ENST00000247020 TYMSOSQ8TAI1 123 aa8.29□□□□□ -1.08
SDF2-201ENST00000247020 ATOX1O00244 68 aa8.27□□□□□ -1.09
SDF2-201ENST00000247020 Q96NJ1 140 aa8.27□□□□□ -1.09
SDF2-201ENST00000247020 Q5VSD8 79 aa8.27□□□□□ -1.09
SDF2-201ENST00000247020 PKHD1L1Q86WI1 4243 aa8.26□□□□□ -1.09
SDF2-201ENST00000247020 A8MWP4 228 aa8.25□□□□□ -1.09
SDF2-201ENST00000247020 K7EQZ3 153 aa8.25□□□□□ -1.09
SDF2-201ENST00000247020 Q8N9L7 120 aa8.25□□□□□ -1.09
SDF2-201ENST00000247020 ANAPC13Q9BS18 74 aa8.25□□□□□ -1.09
SDF2-201ENST00000247020 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
SDF2-201ENST00000247020 FAT1Q14517 4588 aa8.24□□□□□ -1.09
SDF2-201ENST00000247020 SPINK1P00995 79 aa8.24□□□□□ -1.09
SDF2-201ENST00000247020 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
SDF2-201ENST00000247020 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
SDF2-201ENST00000247020 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
SDF2-201ENST00000247020 DEFB116Q30KQ4 102 aa8.23□□□□□ -1.09
SDF2-201ENST00000247020 NDUFB1O75438 58 aa8.22□□□□□ -1.09
SDF2-201ENST00000247020 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
SDF2-201ENST00000247020 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
SDF2-201ENST00000247020 HSPG2P98160 4391 aa8.21□□□□□ -1.09
SDF2-201ENST00000247020 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
SDF2-201ENST00000247020 Q8N1X5 172 aa8.2□□□□□ -1.1
SDF2-201ENST00000247020 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
SDF2-201ENST00000247020 RYR1P21817 5038 aa8.19□□□□□ -1.1
SDF2-201ENST00000247020 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
SDF2-201ENST00000247020 SERP2Q8N6R1 65 aa8.15□□□□□ -1.1
SDF2-201ENST00000247020 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
SDF2-201ENST00000247020 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
SDF2-201ENST00000247020 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
SDF2-201ENST00000247020 COX7CP15954 63 aa8.12□□□□□ -1.11
SDF2-201ENST00000247020 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 264.1 ms