RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 MXRA5Q9NR99 2828 aa6.07□□□□□ -1.44
COL21A1-201ENST00000244728 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
COL21A1-201ENST00000244728 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
COL21A1-201ENST00000244728 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
COL21A1-201ENST00000244728 SEC61GP60059 68 aa6.06□□□□□ -1.44
COL21A1-201ENST00000244728 C1orf64Q8NEQ6 169 aa6.05□□□□□ -1.44
COL21A1-201ENST00000244728 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
COL21A1-201ENST00000244728 C16orf90A8MZG2 172 aa6.04□□□□□ -1.44
COL21A1-201ENST00000244728 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
COL21A1-201ENST00000244728 RTL8CO15255 209 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
COL21A1-201ENST00000244728 A0A1W2PNM2 257 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 BSNQ9UPA5 3926 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 SVEP1Q4LDE5 3571 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 A8MUN3 132 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
COL21A1-201ENST00000244728 SPACA4Q8TDM5 124 aa6.02□□□□□ -1.45
COL21A1-201ENST00000244728 VPS13CQ709C8 3753 aa6.01□□□□□ -1.45
COL21A1-201ENST00000244728 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
COL21A1-201ENST00000244728 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
COL21A1-201ENST00000244728 FAM229BQ4G0N7 80 aa6□□□□□ -1.45
COL21A1-201ENST00000244728 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
COL21A1-201ENST00000244728 ANAPC11Q9NYG5 84 aa5.99□□□□□ -1.45
COL21A1-201ENST00000244728 IGLV5-48A0A075B6I7 105 aa5.98□□□□□ -1.45
COL21A1-201ENST00000244728 SPINK1P00995 79 aa5.98□□□□□ -1.45
COL21A1-201ENST00000244728 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
COL21A1-201ENST00000244728 IGFL1Q6UW32 110 aa5.98□□□□□ -1.45
COL21A1-201ENST00000244728 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
COL21A1-201ENST00000244728 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
COL21A1-201ENST00000244728 SPAG11AQ6PDA7 123 aa5.95□□□□□ -1.46
COL21A1-201ENST00000244728 H3BPC8 53 aa5.94□□□□□ -1.46
COL21A1-201ENST00000244728 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
COL21A1-201ENST00000244728 DSCR10P59022 87 aa5.94□□□□□ -1.46
COL21A1-201ENST00000244728 C9orf163Q8N9P6 203 aa5.93□□□□□ -1.46
COL21A1-201ENST00000244728 CUBNO60494 3623 aa5.92□□□□□ -1.46
COL21A1-201ENST00000244728 PKD1L1Q8TDX9 2849 aa5.92□□□□□ -1.46
COL21A1-201ENST00000244728 A0A087WTM6 91 aa5.92□□□□□ -1.46
COL21A1-201ENST00000244728 A8MWP4 228 aa5.92□□□□□ -1.46
COL21A1-201ENST00000244728 TLX1NBP0CAT3 122 aa5.91□□□□□ -1.46
COL21A1-201ENST00000244728 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
COL21A1-201ENST00000244728 TENM3Q9P273 2699 aa5.91□□□□□ -1.46
COL21A1-201ENST00000244728 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
COL21A1-201ENST00000244728 APLNQ9ULZ1 77 aa5.91□□□□□ -1.46
COL21A1-201ENST00000244728 COA5Q86WW8 74 aa5.9□□□□□ -1.46
COL21A1-201ENST00000244728 PLA2G2DQ9UNK4 145 aa5.9□□□□□ -1.46
COL21A1-201ENST00000244728 TP53AIP1Q9HCN2 124 aa5.89□□□□□ -1.47
COL21A1-201ENST00000244728 SPRR4Q96PI1 79 aa5.89□□□□□ -1.47
COL21A1-201ENST00000244728 FBN1P35555 2871 aaKnown RBP5.89□□□□□ -1.47
COL21A1-201ENST00000244728 Q1T7F1 81 aa5.88□□□□□ -1.47
COL21A1-201ENST00000244728 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
COL21A1-201ENST00000244728 TYMSOSQ8TAI1 123 aa5.88□□□□□ -1.47
COL21A1-201ENST00000244728 PSORS1C2Q9UIG4 136 aa5.86□□□□□ -1.47
COL21A1-201ENST00000244728 CYP4F30PQ9H0H9 118 aa5.85□□□□□ -1.47
COL21A1-201ENST00000244728 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
COL21A1-201ENST00000244728 ZNF861PO60384 105 aa5.84□□□□□ -1.47
COL21A1-201ENST00000244728 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
COL21A1-201ENST00000244728 LOC101927531A0A1B0GV80 90 aa5.83□□□□□ -1.48
COL21A1-201ENST00000244728 LINC00313P59037 77 aa5.83□□□□□ -1.48
COL21A1-201ENST00000244728 TNP2Q05952 138 aa5.83□□□□□ -1.48
COL21A1-201ENST00000244728 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
COL21A1-201ENST00000244728 TENM1Q9UKZ4 2725 aa5.82□□□□□ -1.48
COL21A1-201ENST00000244728 SPRR1AP35321 89 aa5.82□□□□□ -1.48
COL21A1-201ENST00000244728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
COL21A1-201ENST00000244728 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
COL21A1-201ENST00000244728 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
COL21A1-201ENST00000244728 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
COL21A1-201ENST00000244728 ATP11AUNQ6ZP68 121 aa5.8□□□□□ -1.48
COL21A1-201ENST00000244728 Q96NJ1 140 aa5.8□□□□□ -1.48
COL21A1-201ENST00000244728 CD164Q04900 197 aa5.8□□□□□ -1.48
COL21A1-201ENST00000244728 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
COL21A1-201ENST00000244728 FAM229AH3BQW9 127 aa5.79□□□□□ -1.48
COL21A1-201ENST00000244728 ACYP2P14621 99 aa5.79□□□□□ -1.48
COL21A1-201ENST00000244728 PDZD2O15018 2839 aa5.79□□□□□ -1.48
COL21A1-201ENST00000244728 A0A1B0GU69 56 aa5.78□□□□□ -1.48
COL21A1-201ENST00000244728 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
COL21A1-201ENST00000244728 VWFP04275 2813 aa5.78□□□□□ -1.48
COL21A1-201ENST00000244728 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
COL21A1-201ENST00000244728 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
COL21A1-201ENST00000244728 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
COL21A1-201ENST00000244728 K7ERS5 55 aa5.77□□□□□ -1.49
COL21A1-201ENST00000244728 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
COL21A1-201ENST00000244728 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
COL21A1-201ENST00000244728 Q5VV11 94 aa5.76□□□□□ -1.49
COL21A1-201ENST00000244728 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
COL21A1-201ENST00000244728 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
COL21A1-201ENST00000244728 KRTAP4-16G5E9R7 235 aaPredicted RBP5.74□□□□□ -1.49
COL21A1-201ENST00000244728 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
COL21A1-201ENST00000244728 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
COL21A1-201ENST00000244728 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
COL21A1-201ENST00000244728 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
COL21A1-201ENST00000244728 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
COL21A1-201ENST00000244728 PRR26Q8N8Z3 221 aa5.72□□□□□ -1.49
COL21A1-201ENST00000244728 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
COL21A1-201ENST00000244728 Q75L30 129 aa5.7□□□□□ -1.5
COL21A1-201ENST00000244728 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
COL21A1-201ENST00000244728 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
COL21A1-201ENST00000244728 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
COL21A1-201ENST00000244728 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
COL21A1-201ENST00000244728 LCE6AA0A183 80 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms