RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
CXCR4-201ENST00000241393 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
CXCR4-201ENST00000241393 Q9BRP9 147 aa4.97□□□□□ -1.61
CXCR4-201ENST00000241393 CYSTM1Q9H1C7 97 aa4.97□□□□□ -1.61
CXCR4-201ENST00000241393 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
CXCR4-201ENST00000241393 FAM168BA1KXE4 195 aa4.96□□□□□ -1.61
CXCR4-201ENST00000241393 KLKP1Q107X0 134 aa4.96□□□□□ -1.61
CXCR4-201ENST00000241393 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
CXCR4-201ENST00000241393 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
CXCR4-201ENST00000241393 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
CXCR4-201ENST00000241393 DEFB105AQ8NG35 78 aa4.96□□□□□ -1.62
CXCR4-201ENST00000241393 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 BPY2O14599 106 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 REG3GQ6UW15 175 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 ANK2Q01484 3957 aa4.95□□□□□ -1.62
CXCR4-201ENST00000241393 NDUFC1O43677 76 aa4.94□□□□□ -1.62
CXCR4-201ENST00000241393 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
CXCR4-201ENST00000241393 IGKV4-1P06312 121 aa4.94□□□□□ -1.62
CXCR4-201ENST00000241393 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
CXCR4-201ENST00000241393 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
CXCR4-201ENST00000241393 DPH3Q96FX2 82 aa4.94□□□□□ -1.62
CXCR4-201ENST00000241393 A0A1W2PNM2 257 aa4.93□□□□□ -1.62
CXCR4-201ENST00000241393 EPM2AB3EWF7 344 aa4.93□□□□□ -1.62
CXCR4-201ENST00000241393 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
CXCR4-201ENST00000241393 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
CXCR4-201ENST00000241393 UBE2BP63146 152 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 C3orf84H3BNL1 204 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 H7BZZ5 65 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 ST20-AS1Q8NBB2 130 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 APLNQ9ULZ1 77 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
CXCR4-201ENST00000241393 DNAH1Q9P2D7 4330 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 IGLV8-61A0A075B6I0 122 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 A0A096LNI7 61 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 F8WEM9 126 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 PSCAO43653 123 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
CXCR4-201ENST00000241393 HUWE1Q7Z6Z7 4374 aaKnown RBP4.9□□□□□ -1.62
CXCR4-201ENST00000241393 H0Y9J4 135 aa4.9□□□□□ -1.62
CXCR4-201ENST00000241393 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.62
CXCR4-201ENST00000241393 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.63
CXCR4-201ENST00000241393 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
CXCR4-201ENST00000241393 B9D2Q9BPU9 175 aa4.89□□□□□ -1.63
CXCR4-201ENST00000241393 A0A1W2PNN7 141 aa4.89□□□□□ -1.63
CXCR4-201ENST00000241393 SPRR1BP22528 89 aa4.88□□□□□ -1.63
CXCR4-201ENST00000241393 Q8N9L7 120 aa4.88□□□□□ -1.63
CXCR4-201ENST00000241393 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
CXCR4-201ENST00000241393 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
CXCR4-201ENST00000241393 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
CXCR4-201ENST00000241393 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
CXCR4-201ENST00000241393 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 NUPR2A6NF83 97 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 A0A0U1RQV1 116 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 LCE6AA0A183 80 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 IGFL1Q6UW32 110 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 SNURFQ9Y675 71 aa4.86□□□□□ -1.63
CXCR4-201ENST00000241393 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
CXCR4-201ENST00000241393 LRCOL1A6NCL2 159 aa4.85□□□□□ -1.63
CXCR4-201ENST00000241393 DSCR10P59022 87 aa4.85□□□□□ -1.63
CXCR4-201ENST00000241393 PRLHP81277 87 aa4.85□□□□□ -1.63
CXCR4-201ENST00000241393 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
CXCR4-201ENST00000241393 OXTP01178 125 aa4.84□□□□□ -1.63
CXCR4-201ENST00000241393 HIGD2AQ9BW72 106 aa4.84□□□□□ -1.63
CXCR4-201ENST00000241393 STAB2Q8WWQ8 2551 aa4.84□□□□□ -1.63
CXCR4-201ENST00000241393 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
CXCR4-201ENST00000241393 UBE2AP49459 152 aa4.83□□□□□ -1.64
CXCR4-201ENST00000241393 Q6ZRN7 208 aaPredicted RBP4.83□□□□□ -1.64
CXCR4-201ENST00000241393 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
CXCR4-201ENST00000241393 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
CXCR4-201ENST00000241393 K7EQZ3 153 aa4.81□□□□□ -1.64
CXCR4-201ENST00000241393 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
CXCR4-201ENST00000241393 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
CXCR4-201ENST00000241393 A0A087WSZ3 146 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 Q5XG85 94 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
CXCR4-201ENST00000241393 DNAH9Q9NYC9 4486 aa4.79□□□□□ -1.64
CXCR4-201ENST00000241393 RPL37AP61513 92 aaKnown RBP4.78□□□□□ -1.64
CXCR4-201ENST00000241393 SPACA4Q8TDM5 124 aa4.78□□□□□ -1.64
CXCR4-201ENST00000241393 ZCCHC13Q8WW36 166 aaKnown RBP4.78□□□□□ -1.64
CXCR4-201ENST00000241393 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
CXCR4-201ENST00000241393 A0A087WTM6 91 aa4.76□□□□□ -1.65
CXCR4-201ENST00000241393 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
CXCR4-201ENST00000241393 A8MWP4 228 aa4.76□□□□□ -1.65
CXCR4-201ENST00000241393 PRR15Q8IV56 129 aa4.76□□□□□ -1.65
CXCR4-201ENST00000241393 H3BPC8 53 aa4.75□□□□□ -1.65
CXCR4-201ENST00000241393 LINC00483Q53H64 154 aa4.75□□□□□ -1.65
CXCR4-201ENST00000241393 ZNF706Q9Y5V0 76 aaPredicted RBP4.75□□□□□ -1.65
CXCR4-201ENST00000241393 COL7A1Q02388 2944 aa4.74□□□□□ -1.65
CXCR4-201ENST00000241393 PANO1I0J062 215 aa4.74□□□□□ -1.65
CXCR4-201ENST00000241393 NDUFB1O75438 58 aa4.74□□□□□ -1.65
CXCR4-201ENST00000241393 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
CXCR4-201ENST00000241393 MP68P56378 58 aa4.73□□□□□ -1.65
CXCR4-201ENST00000241393 C4orf26Q17RF5 130 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms