RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 SMG1Q96Q15 3661 aaKnown RBP7.04□□□□□ -1.28
CCDC170-201ENST00000239374 FBN2P35556 2912 aa7.03□□□□□ -1.28
CCDC170-201ENST00000239374 TEP1Q99973 2627 aaKnown RBP7.02□□□□□ -1.29
CCDC170-201ENST00000239374 DCHS2Q6V1P9 2916 aa7.02□□□□□ -1.29
CCDC170-201ENST00000239374 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
CCDC170-201ENST00000239374 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
CCDC170-201ENST00000239374 NF1P21359 2839 aa7.01□□□□□ -1.29
CCDC170-201ENST00000239374 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
CCDC170-201ENST00000239374 ACYP2P14621 99 aa7□□□□□ -1.29
CCDC170-201ENST00000239374 SPINK1P00995 79 aa7□□□□□ -1.29
CCDC170-201ENST00000239374 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
CCDC170-201ENST00000239374 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
CCDC170-201ENST00000239374 A0A1B0GU69 56 aa6.99□□□□□ -1.29
CCDC170-201ENST00000239374 C8orf17Q9NRJ1 99 aa6.99□□□□□ -1.29
CCDC170-201ENST00000239374 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
CCDC170-201ENST00000239374 MDFIQ99750 246 aa6.99□□□□□ -1.29
CCDC170-201ENST00000239374 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
CCDC170-201ENST00000239374 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
CCDC170-201ENST00000239374 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
CCDC170-201ENST00000239374 ATP11AUNQ6ZP68 121 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 LY6G6CO95867 125 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 BAHCC1Q9P281 2608 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 SPRR1AP35321 89 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
CCDC170-201ENST00000239374 CD164Q04900 197 aa6.96□□□□□ -1.3
CCDC170-201ENST00000239374 NBDYA0A0U1RRE5 68 aa6.95□□□□□ -1.3
CCDC170-201ENST00000239374 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
CCDC170-201ENST00000239374 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
CCDC170-201ENST00000239374 C9orf163Q8N9P6 203 aa6.92□□□□□ -1.3
CCDC170-201ENST00000239374 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
CCDC170-201ENST00000239374 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
CCDC170-201ENST00000239374 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
CCDC170-201ENST00000239374 APCP25054 2843 aa6.91□□□□□ -1.3
CCDC170-201ENST00000239374 K7ERS5 55 aa6.91□□□□□ -1.3
CCDC170-201ENST00000239374 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
CCDC170-201ENST00000239374 STAB1Q9NY15 2570 aa6.91□□□□□ -1.3
CCDC170-201ENST00000239374 K7EIL1 84 aa6.91□□□□□ -1.3
CCDC170-201ENST00000239374 TNP2Q05952 138 aa6.91□□□□□ -1.3
CCDC170-201ENST00000239374 ITPR2Q14571 2701 aa6.9□□□□□ -1.3
CCDC170-201ENST00000239374 NBEAL1Q6ZS30 2694 aa6.9□□□□□ -1.31
CCDC170-201ENST00000239374 RTL8CO15255 209 aa6.9□□□□□ -1.31
CCDC170-201ENST00000239374 LINC00313P59037 77 aa6.9□□□□□ -1.31
CCDC170-201ENST00000239374 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.31
CCDC170-201ENST00000239374 C1orf134Q5TEV5 83 aa6.89□□□□□ -1.31
CCDC170-201ENST00000239374 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
CCDC170-201ENST00000239374 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
CCDC170-201ENST00000239374 CELSR1Q9NYQ6 3014 aa6.88□□□□□ -1.31
CCDC170-201ENST00000239374 Q5VV11 94 aa6.88□□□□□ -1.31
CCDC170-201ENST00000239374 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
CCDC170-201ENST00000239374 HIVEP1P15822 2718 aa6.88□□□□□ -1.31
CCDC170-201ENST00000239374 IGLV7-46A0A075B6I9 117 aa6.87□□□□□ -1.31
CCDC170-201ENST00000239374 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
CCDC170-201ENST00000239374 SVEP1Q4LDE5 3571 aa6.86□□□□□ -1.31
CCDC170-201ENST00000239374 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
CCDC170-201ENST00000239374 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
CCDC170-201ENST00000239374 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
CCDC170-201ENST00000239374 MMP24-AS1A0A0U1RRL7 71 aa6.85□□□□□ -1.31
CCDC170-201ENST00000239374 ZNF861PO60384 105 aa6.84□□□□□ -1.32
CCDC170-201ENST00000239374 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.32
CCDC170-201ENST00000239374 Q75L30 129 aa6.83□□□□□ -1.32
CCDC170-201ENST00000239374 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
CCDC170-201ENST00000239374 NSD1Q96L73 2696 aaPredicted RBP6.83□□□□□ -1.32
CCDC170-201ENST00000239374 NIPBLQ6KC79 2804 aaeCLIP6.82□□□□□ -1.32
CCDC170-201ENST00000239374 PSORS1C2Q9UIG4 136 aa6.82□□□□□ -1.32
CCDC170-201ENST00000239374 UQCR11O14957 56 aa6.81□□□□□ -1.32
CCDC170-201ENST00000239374 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
CCDC170-201ENST00000239374 LCA10Q71F78 164 aa6.78□□□□□ -1.32
CCDC170-201ENST00000239374 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CCDC170-201ENST00000239374 APLNQ9ULZ1 77 aa6.78□□□□□ -1.32
CCDC170-201ENST00000239374 A0A087WTM6 91 aa6.78□□□□□ -1.32
CCDC170-201ENST00000239374 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
CCDC170-201ENST00000239374 SPRR1BP22528 89 aa6.77□□□□□ -1.33
CCDC170-201ENST00000239374 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
CCDC170-201ENST00000239374 SPENQ96T58 3664 aaKnown RBP6.76□□□□□ -1.33
CCDC170-201ENST00000239374 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
CCDC170-201ENST00000239374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
CCDC170-201ENST00000239374 HRES1P13985 223 aa6.75□□□□□ -1.33
CCDC170-201ENST00000239374 SSBP3-AS1Q7Z2R9 100 aa6.75□□□□□ -1.33
CCDC170-201ENST00000239374 LCE6AA0A183 80 aa6.75□□□□□ -1.33
CCDC170-201ENST00000239374 Q96NJ1 140 aa6.75□□□□□ -1.33
CCDC170-201ENST00000239374 CUBNO60494 3623 aa6.73□□□□□ -1.33
CCDC170-201ENST00000239374 SPINK7P58062 85 aa6.73□□□□□ -1.33
CCDC170-201ENST00000239374 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
CCDC170-201ENST00000239374 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
CCDC170-201ENST00000239374 TYMSOSQ8TAI1 123 aa6.71□□□□□ -1.34
CCDC170-201ENST00000239374 STAB2Q8WWQ8 2551 aa6.7□□□□□ -1.34
CCDC170-201ENST00000239374 A8MU10 97 aa6.69□□□□□ -1.34
CCDC170-201ENST00000239374 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
CCDC170-201ENST00000239374 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
CCDC170-201ENST00000239374 KRTAP11-1Q8IUC1 163 aa6.65□□□□□ -1.35
CCDC170-201ENST00000239374 Q8N1X5 172 aa6.64□□□□□ -1.35
CCDC170-201ENST00000239374 PANO1I0J062 215 aa6.63□□□□□ -1.35
CCDC170-201ENST00000239374 WWC2-AS2Q96NR7 200 aa6.63□□□□□ -1.35
CCDC170-201ENST00000239374 Q6ZR54 194 aa6.62□□□□□ -1.35
CCDC170-201ENST00000239374 Q5W150 140 aa6.6□□□□□ -1.35
CCDC170-201ENST00000239374 A0A087X002 238 aa6.59□□□□□ -1.36
CCDC170-201ENST00000239374 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.36
CCDC170-201ENST00000239374 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms