RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
NEK9-201ENST00000238616 LITAFQ99732 161 aa8.51□□□□□ -1.05
NEK9-201ENST00000238616 Q1T7F1 81 aa8.5□□□□□ -1.05
NEK9-201ENST00000238616 CFAP47Q6ZTR5 3102 aa8.5□□□□□ -1.05
NEK9-201ENST00000238616 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
NEK9-201ENST00000238616 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
NEK9-201ENST00000238616 LAMA1P25391 3075 aa8.5□□□□□ -1.05
NEK9-201ENST00000238616 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
NEK9-201ENST00000238616 TEP1Q99973 2627 aaKnown RBP8.49□□□□□ -1.05
NEK9-201ENST00000238616 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
NEK9-201ENST00000238616 LINC00612Q8N6U2 182 aa8.49□□□□□ -1.05
NEK9-201ENST00000238616 APCP25054 2843 aa8.48□□□□□ -1.05
NEK9-201ENST00000238616 LCA10Q71F78 164 aa8.48□□□□□ -1.05
NEK9-201ENST00000238616 S4R3F8 94 aa8.47□□□□□ -1.05
NEK9-201ENST00000238616 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
NEK9-201ENST00000238616 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
NEK9-201ENST00000238616 NOTCH1P46531 2555 aa8.47□□□□□ -1.05
NEK9-201ENST00000238616 GCN1Q92616 2671 aaKnown RBP8.47□□□□□ -1.05
NEK9-201ENST00000238616 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.05
NEK9-201ENST00000238616 KALRNO60229 2985 aa8.45□□□□□ -1.06
NEK9-201ENST00000238616 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
NEK9-201ENST00000238616 STAB2Q8WWQ8 2551 aa8.45□□□□□ -1.06
NEK9-201ENST00000238616 PRR34Q9NV39 138 aa8.45□□□□□ -1.06
NEK9-201ENST00000238616 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
NEK9-201ENST00000238616 HRES1P13985 223 aa8.45□□□□□ -1.06
NEK9-201ENST00000238616 A0A1B0GU33 70 aa8.44□□□□□ -1.06
NEK9-201ENST00000238616 TNP2Q05952 138 aa8.44□□□□□ -1.06
NEK9-201ENST00000238616 BOD1L1Q8NFC6 3051 aa8.44□□□□□ -1.06
NEK9-201ENST00000238616 MYO15AQ9UKN7 3530 aa8.43□□□□□ -1.06
NEK9-201ENST00000238616 CHD7Q9P2D1 2997 aa8.43□□□□□ -1.06
NEK9-201ENST00000238616 SETXQ7Z333 2677 aaKnown RBP8.43□□□□□ -1.06
NEK9-201ENST00000238616 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
NEK9-201ENST00000238616 H7BZZ5 65 aa8.41□□□□□ -1.06
NEK9-201ENST00000238616 LRBAP50851 2863 aa8.39□□□□□ -1.07
NEK9-201ENST00000238616 R4GN34 69 aa8.37□□□□□ -1.07
NEK9-201ENST00000238616 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
NEK9-201ENST00000238616 ASPMQ8IZT6 3477 aa8.36□□□□□ -1.07
NEK9-201ENST00000238616 FRYLO94915 3013 aa8.36□□□□□ -1.07
NEK9-201ENST00000238616 SPANXA2-OT1Q8N9U9 137 aa8.36□□□□□ -1.07
NEK9-201ENST00000238616 CNBPP62633 177 aaKnown RBP8.36□□□□□ -1.07
NEK9-201ENST00000238616 COL12A1Q99715 3063 aa8.35□□□□□ -1.07
NEK9-201ENST00000238616 ZZEF1O43149 2961 aa8.34□□□□□ -1.07
NEK9-201ENST00000238616 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
NEK9-201ENST00000238616 DMXL2Q8TDJ6 3036 aa8.33□□□□□ -1.08
NEK9-201ENST00000238616 C10orf142B7Z368 130 aa8.32□□□□□ -1.08
NEK9-201ENST00000238616 NSD1Q96L73 2696 aaPredicted RBP8.32□□□□□ -1.08
NEK9-201ENST00000238616 A0A1W2PNM2 257 aa8.31□□□□□ -1.08
NEK9-201ENST00000238616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
NEK9-201ENST00000238616 Q5VSD8 79 aa8.3□□□□□ -1.08
NEK9-201ENST00000238616 SPINK7P58062 85 aa8.29□□□□□ -1.08
NEK9-201ENST00000238616 ATMQ13315 3056 aa8.28□□□□□ -1.08
NEK9-201ENST00000238616 NBEAL2Q6ZNJ1 2754 aa8.28□□□□□ -1.08
NEK9-201ENST00000238616 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
NEK9-201ENST00000238616 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
NEK9-201ENST00000238616 ZNF292O60281 2723 aa8.26□□□□□ -1.09
NEK9-201ENST00000238616 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
NEK9-201ENST00000238616 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
NEK9-201ENST00000238616 UTP20O75691 2785 aaKnown RBP8.24□□□□□ -1.09
NEK9-201ENST00000238616 ADGRG4Q8IZF6 3080 aa8.22□□□□□ -1.09
NEK9-201ENST00000238616 ZCCHC13Q8WW36 166 aaKnown RBP8.21□□□□□ -1.1
NEK9-201ENST00000238616 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
NEK9-201ENST00000238616 LAMA5O15230 3695 aa8.19□□□□□ -1.1
NEK9-201ENST00000238616 H3BS24 57 aa8.19□□□□□ -1.1
NEK9-201ENST00000238616 M0QZ58 72 aa8.17□□□□□ -1.1
NEK9-201ENST00000238616 FAM229BQ4G0N7 80 aa8.16□□□□□ -1.1
NEK9-201ENST00000238616 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
NEK9-201ENST00000238616 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
NEK9-201ENST00000238616 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
NEK9-201ENST00000238616 A0A096LNT2 108 aa8.12□□□□□ -1.11
NEK9-201ENST00000238616 Q75L30 129 aa8.12□□□□□ -1.11
NEK9-201ENST00000238616 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
NEK9-201ENST00000238616 LOC400499M0QZD8 3231 aa8.09□□□□□ -1.11
NEK9-201ENST00000238616 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
NEK9-201ENST00000238616 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
NEK9-201ENST00000238616 DMXL1Q9Y485 3027 aa8.08□□□□□ -1.12
NEK9-201ENST00000238616 Q5W150 140 aa8.07□□□□□ -1.12
NEK9-201ENST00000238616 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
NEK9-201ENST00000238616 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
NEK9-201ENST00000238616 TNRC18O15417 2968 aaPredicted RBP8.07□□□□□ -1.12
NEK9-201ENST00000238616 TACC2O95359 2948 aa8.07□□□□□ -1.12
NEK9-201ENST00000238616 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
NEK9-201ENST00000238616 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
NEK9-201ENST00000238616 ROMO1P60602 79 aa8.04□□□□□ -1.12
NEK9-201ENST00000238616 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
NEK9-201ENST00000238616 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
NEK9-201ENST00000238616 DCHS1Q96JQ0 3298 aa8.02□□□□□ -1.13
NEK9-201ENST00000238616 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
NEK9-201ENST00000238616 ITPR1Q14643 2758 aa8□□□□□ -1.13
NEK9-201ENST00000238616 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
NEK9-201ENST00000238616 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
NEK9-201ENST00000238616 KRTAP1-1Q07627 177 aa7.98□□□□□ -1.13
NEK9-201ENST00000238616 RELNP78509 3460 aa7.98□□□□□ -1.13
NEK9-201ENST00000238616 ZFHX4Q86UP3 3567 aa7.94□□□□□ -1.14
NEK9-201ENST00000238616 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
NEK9-201ENST00000238616 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
NEK9-201ENST00000238616 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
NEK9-201ENST00000238616 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
NEK9-201ENST00000238616 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
NEK9-201ENST00000238616 Q5VV11 94 aa7.91□□□□□ -1.14
NEK9-201ENST00000238616 SPENQ96T58 3664 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms