RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 Q6ZQT0 140 aa5.49□□□□□ -1.53
VPS4B-201ENST00000238497 F8WDY8 70 aa5.49□□□□□ -1.53
VPS4B-201ENST00000238497 J3KT08 172 aa5.49□□□□□ -1.53
VPS4B-201ENST00000238497 DEFB116Q30KQ4 102 aa5.49□□□□□ -1.53
VPS4B-201ENST00000238497 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
VPS4B-201ENST00000238497 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 GHRHP01286 108 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 NREPQ16612 68 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 TRBV7-7A0A0K0K1E9 115 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 C14orf177Q52M58 125 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 Q5VSD8 79 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 Q6ZVQ6 151 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 REG3GQ6UW15 175 aa5.48□□□□□ -1.53
VPS4B-201ENST00000238497 Q6Q795 121 aa5.47□□□□□ -1.53
VPS4B-201ENST00000238497 IGLV1-50A0A075B6I6 118 aa5.47□□□□□ -1.53
VPS4B-201ENST00000238497 UBE2AP49459 152 aa5.47□□□□□ -1.53
VPS4B-201ENST00000238497 OBSCN-AS1Q96MR7 158 aa5.47□□□□□ -1.53
VPS4B-201ENST00000238497 Q9BRP9 147 aa5.47□□□□□ -1.53
VPS4B-201ENST00000238497 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.53
VPS4B-201ENST00000238497 Q8N377 158 aa5.46□□□□□ -1.53
VPS4B-201ENST00000238497 KCNQ1DNQ9H478 68 aa5.46□□□□□ -1.53
VPS4B-201ENST00000238497 F8WEM9 126 aa5.46□□□□□ -1.54
VPS4B-201ENST00000238497 Q6ZRX8 168 aa5.46□□□□□ -1.54
VPS4B-201ENST00000238497 Q6JHZ5 121 aa5.46□□□□□ -1.54
VPS4B-201ENST00000238497 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
VPS4B-201ENST00000238497 C1orf137Q5JT78 98 aa5.45□□□□□ -1.54
VPS4B-201ENST00000238497 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
VPS4B-201ENST00000238497 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
VPS4B-201ENST00000238497 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
VPS4B-201ENST00000238497 PANO1I0J062 215 aa5.43□□□□□ -1.54
VPS4B-201ENST00000238497 ATOX1O00244 68 aa5.43□□□□□ -1.54
VPS4B-201ENST00000238497 BPY2O14599 106 aa5.43□□□□□ -1.54
VPS4B-201ENST00000238497 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
VPS4B-201ENST00000238497 PRYO14603 147 aa5.42□□□□□ -1.54
VPS4B-201ENST00000238497 TLX1NBP0CAT3 122 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 PDE6GP18545 87 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 V9GYY9 64 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 CIRBP-AS1Q8TBR5 109 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
VPS4B-201ENST00000238497 LOC110117498A0A087WWA1 95 aa5.4□□□□□ -1.55
VPS4B-201ENST00000238497 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.55
VPS4B-201ENST00000238497 TRBV7-4A0A0J9YYF1 115 aa5.4□□□□□ -1.55
VPS4B-201ENST00000238497 FAM236DA0A1B0GTK5 79 aa5.4□□□□□ -1.55
VPS4B-201ENST00000238497 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.55
VPS4B-201ENST00000238497 FAM236CP0DP71 79 aa5.4□□□□□ -1.55
VPS4B-201ENST00000238497 COX7CP15954 63 aa5.39□□□□□ -1.55
VPS4B-201ENST00000238497 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
VPS4B-201ENST00000238497 J3QL48 77 aa5.39□□□□□ -1.55
VPS4B-201ENST00000238497 UQCRQO14949 82 aa5.39□□□□□ -1.55
VPS4B-201ENST00000238497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
VPS4B-201ENST00000238497 A0A087WSZ3 146 aa5.38□□□□□ -1.55
VPS4B-201ENST00000238497 C9orf163Q8N9P6 203 aa5.38□□□□□ -1.55
VPS4B-201ENST00000238497 H3BQ85 93 aa5.38□□□□□ -1.55
VPS4B-201ENST00000238497 MYCBP2O75592 4640 aa5.38□□□□□ -1.55
VPS4B-201ENST00000238497 A0A1W2PNM2 257 aa5.37□□□□□ -1.55
VPS4B-201ENST00000238497 SERP2Q8N6R1 65 aa5.37□□□□□ -1.55
VPS4B-201ENST00000238497 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
VPS4B-201ENST00000238497 Q6ZSA8 131 aa5.36□□□□□ -1.55
VPS4B-201ENST00000238497 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
VPS4B-201ENST00000238497 ATP5EP2Q5VTU8 51 aa5.35□□□□□ -1.55
VPS4B-201ENST00000238497 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
VPS4B-201ENST00000238497 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
VPS4B-201ENST00000238497 OXTP01178 125 aa5.35□□□□□ -1.55
VPS4B-201ENST00000238497 RPL37AP61513 92 aaKnown RBP5.35□□□□□ -1.55
VPS4B-201ENST00000238497 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
VPS4B-201ENST00000238497 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
VPS4B-201ENST00000238497 HERC1Q15751 4861 aa5.34□□□□□ -1.55
VPS4B-201ENST00000238497 SPRR1AP35321 89 aa5.33□□□□□ -1.56
VPS4B-201ENST00000238497 C1orf195Q5TG92 126 aa5.33□□□□□ -1.56
VPS4B-201ENST00000238497 IGFL1Q6UW32 110 aa5.33□□□□□ -1.56
VPS4B-201ENST00000238497 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
VPS4B-201ENST00000238497 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
VPS4B-201ENST00000238497 Q5XG85 94 aa5.33□□□□□ -1.56
VPS4B-201ENST00000238497 Q8NBF4 154 aa5.32□□□□□ -1.56
VPS4B-201ENST00000238497 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
VPS4B-201ENST00000238497 H0Y9J4 135 aa5.31□□□□□ -1.56
VPS4B-201ENST00000238497 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
VPS4B-201ENST00000238497 LINC00474Q9P2X8 69 aa5.31□□□□□ -1.56
VPS4B-201ENST00000238497 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 K7EQZ3 153 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 CXCL6P80162 114 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
VPS4B-201ENST00000238497 PSORS1C2Q9UIG4 136 aa5.29□□□□□ -1.56
VPS4B-201ENST00000238497 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
VPS4B-201ENST00000238497 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
VPS4B-201ENST00000238497 PRR4Q16378 134 aa5.28□□□□□ -1.56
VPS4B-201ENST00000238497 BCE1O60756 84 aa5.28□□□□□ -1.56
VPS4B-201ENST00000238497 MOBPQ13875 183 aa5.27□□□□□ -1.57
VPS4B-201ENST00000238497 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
VPS4B-201ENST00000238497 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
VPS4B-201ENST00000238497 CRYGAP11844 174 aa5.26□□□□□ -1.57
VPS4B-201ENST00000238497 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
VPS4B-201ENST00000238497 NDUFS5O43920 106 aa5.25□□□□□ -1.57
VPS4B-201ENST00000238497 TMEM258P61165 79 aa5.24□□□□□ -1.57
VPS4B-201ENST00000238497 DSCR10P59022 87 aa5.24□□□□□ -1.57
VPS4B-201ENST00000238497 TMEM254Q8TBM7 123 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms